M. Aida, M. Kanemori, N. Kubota, and M. Matada, Sasayama Y & Fukumori Y Distribution and Population of Free-Living Cells Related to Endosymbiont A Harbored in Oligobrachia mashikoi (a Siboglinid Polychaete) Inhabiting Tsukumo Bay, Microbes and Environments, vol.23, pp.81-88, 2008.

K. Alain, A. Postec, E. Grinsard, and F. Lesongeur, Prieur D & Godfroy A Thermodesulfatator atlanticus sp. nov., a thermophilic, chemolithoautotrophic, sulfate-reducing bacterium isolated from a Mid-Atlantic Ridge hydrothermal vent, International Journal of Systematic and Evolutionary Microbiology, vol.60, pp.33-38, 2010.

A. K. Rolland, S. Crassous, and P. , Desulfurobacterium crinifex sp. nov., a novel thermophilic, pinkish-streamer forming, chemolithoautotrophic bacterium isolated from a Juan de Fuca Ridge hydrothermal vent and amendement of te genus Desulfurobacerium, Extremophiles, vol.7, p.114, 2003.

T. R. Anderson, Rice T Deserts on the sea floor: Edward Forbes and his azoic hypothesis for a lifeless deep ocean, Endeavour, vol.30, pp.131-137, 2006.

C. Anthony, . Biochemistry, and . Methylotrophs, , 1982.

M. Beh, G. Strauss, R. Huber, and K. O. Stetter, Fuchs G Enzymes of the reductive citric acid cycle in the autotrophic eubacterium Aquifex pyrophilus and in the archaebacterium Thermoproteus neutrophilus, Archives of Microbiology, vol.160, p.306, 1993.

J. L. Bischoff, Rosenbauer RJ Liquid-vapor relations in the critical region of the system NaCl-H2O from 380 to 415°C: A refined determination of the critical point and two-phase boundary of seawater, Geochimica et Cosmochimica Acta, vol.52, pp.2121-2126, 1988.

Y. Bogdanov, A. Sagalevitch, E. Chernyaev, A. Ashadze, E. Gurvich et al., Peresypkin V A stud of the h d othe al field at ° ? N o the Mid-Atla ti 'idge usi g the MI' submersibles, BRIDGE newsletter, vol.9, pp.9-13, 1995.

M. Bright, Bulgheresi S A complex journey: transmission of microbial symbionts, Nature Reviews Microbiology, vol.8, pp.218-230, 2010.

B. B. Buchanan, D. Arnon, and . Krebs, photosynthesis: consensus at last, vol.24, pp.47-53, 1990.

, Calgano R Les grands fonds marins, 2011.

B. J. Campbell and A. S. Engel, Porter ML & Takai K The versatile epsilon-proteobacteria: key players in sulphidic habitats, Nature Reviews Microbiology, vol.4, pp.458-468, 2006.

, Carney RS Consideration of the oasis analogy for chemosynthetic communities at Gulf of Mexico hydrocarbon vents, vol.14, pp.149-159, 1994.

B. Casanova, M. Brunet, and M. Segonzac, Impact of bacterial epibiosis on functional-morphology of shrimp associated with the Mid-Atlantic hydrothermal conditions, vol.34, pp.573-588, 1993.

, Chamberlain SC Vision in hydrothermal vent shrimp, Phylosophycal transactions of the Royal Society of London B, vol.355, pp.1151-1154, 2000.

J. L. Charlou, J. P. Donval, Y. Fouquet, P. Jean-baptiste, H. Holm et al., Chemical Geology, vol.191, pp.345-359, 2002.

L. R. Cleveland, Grimstone AV The fine structure of the flagellate Mixotricha paradoxa and its associated micro-organisms, Proceedings of the Royal society of London B : Biological Sciences, vol.159, pp.668-686, 1964.

J. Copley, P. Tyler, and B. Murton, Van Dover C Spatial and interannual variation in the faunal distribution at Broken Spur vent field (29°N, Mid-Atlantic Ridge), Marine Biology, vol.129, pp.723-733, 1997.

L. Corbari, M. Zbinden, M. Cambon-bonavita, and F. Gaill, Compère P Bacterial symbionts and mineral deposits in the branchial chamber of the hydrothermal vent shrimp Rimicaris exoculata: relationship to moult cycle, Aquat Biol, vol.1, pp.225-238, 2008.

L. Corbari, M. Cambon-bonavita, G. J. Long, F. Grandjean, and M. Zbinden, Gaill F & Compère P Iron oxide deposits associated with the ectosymbiotic bacteria in the hydrothermal vent shrimp Rimicaris exoculata, Biogeosciences Discussions, vol.5, pp.1825-1865, 2008.

J. B. Corliss, J. Dymond, and L. I. Gordon, Submarine thermal sprirngs on the galapagos rift, Science, vol.203, pp.1073-1083, 1979.

J. L. Costa, P. Paulsrud, J. Rikkinen, and . Linblad, Genetic diversity of Nostoc symbionts endophytically associated with two bryophyte species, Applied and Environmental Microbiology, vol.67, pp.4393-4396, 2001.

V. Crépeau, M. Cambon-bonavita, F. Lesongeur, H. Randrianalivelo, P. Sarradin et al., Godfroy A Diversity and function in microbial mats from the Lucky Strike hydrothermal vent field, FEMS microbiology ecology, vol.76, pp.524-540, 2011.

G. Deckert, P. V. Warren, and T. Gaasterland, The complete genome of the hyperthermophilic bacterium Aquifex aeolicus, Nature, vol.392, pp.353-358, 1998.

S. N. Dedysh, W. Liesack, V. N. Khmelenina, N. E. Suzina, Y. A. Trotsenko et al., Bares AM, Panikov NS & Tiedje JM Methylocella palustris gen. nov., sp. nov., a new methane-oxidizing acidophilic bacterium from peat bogs, representing a novel subtype of serine-pathway methanotrophs, International Journal of Systematic and Evolutionary Microbiology, vol.50, pp.955-969, 2000.

J. R. Delaney, V. Robigou, and R. E. Mcduff, Tivey MK Geology of a vigorous hydrothermal system on the Endeavour Segment, Juan de Fuca Ridge, Journal of Geophysical Research: Solid Earth, vol.97, pp.19663-19682, 1992.

D. Desbruyères and L. Laubier, Primary consumers from hydrothermal vents animal communities, Hydrothermal processes at seafloor spreading centers, pp.711-734, 1983.

D. Desbruyères, Segonzac M Handbook of deep-sea hydrothermal vent fauna, Editions Quae, 1997.

D. Desbruyères, A. Almeida, M. Biscoito, T. Comtet, A. Khripounoff et al., A review of the distribution of hydrothermal vent communities along the northern Mid-Atlantic Ridge: dispersal vs. environmental controls, Island, Ocean and Deep-Sea Biology, vol.152, 2000.

. Springer, , pp.201-216

D. Desbruyères, M. Biscoito, J. Caprais, A. Colaço, T. Comtet et al., Le Bris N & Olu K Variations in deep-sea hydrothermal vent communities on the Mid-Atlantic Ridge near the Azores plateau, Deep Sea Research Part I: Oceanographic Research Papers, vol.48, pp.1325-1346, 2001.

D. Desbruyères, P. Chevaldonné, and A. M. Alayse, Biolog a d e olog of the Po peii o (Alvinella pompejana Desbruyères and Laubier), a normal dweller of an extreme deep-sea environment: A synthesis of current knowledge and recent developments, Deep Sea Research Part II: Topical Studies in Oceanography, vol.45, pp.383-422, 1998.

E. Douville, J. L. Charlou, E. H. Oelkers, P. Bienvenu, J. Colon et al., the i flue e of ult a afi o ks a d phase separation on trace metal content in Mid-Atlantic Ridge hydrothermal fluids, Chemical Geology, vol.184, pp.37-48, 2002.

S. Duperron, S. Halary, and J. Lorion, uet M & Gaill F U e pe ted o-o u e e of si a te ial symbionts in the gills of the cold seep mussel Idas sp.(Bivalvia: Mytilidae), vol.10, pp.433-445, 2008.

S. Duperron, M. Sibuet, B. J. Macgregor, M. Kuypers, C. R. Fisher et al., relative abundance and metabolic potential of bacterial endosymbionts in three Bathymodiolus mussel species from cold seeps in the Gulf of Mexico, Environmental Microbiology, vol.9, pp.1423-1438, 2007.

S. Duperron, T. Nadalig, J. C. Caprais, M. Sibuet, and A. Fiala-médioni, Amann R & Dubilier N Dual symbiosis in a Bathymodiolus sp. mussel from a methane seep on the Gabon continental margin (Southeast Atlantic): 16S rRNA phylogeny and distribution of the Symbiont in Gills, Applied and Environmental Microbiology, vol.71, pp.1694-1700, 2005.

S. Duperron, C. Bergin, F. Zielinski, A. Blazejak, A. Pernthaler et al., Cavanaugh CM & Dubilier N A dual symbiosis shared by two mussel species, Bathymodiolus azoricus and Bathymodiolus puteoserpentis (Bivalvia: Mytilidae), from hydrothermal vents along the northern Mid-Atlantic Ridge, Environmental Microbiology, vol.8, pp.1441-1447, 2006.

L. Durand, M. Zbinden, V. Cueff-gauchard, S. Duperron, and E. G. Roussel, Shillito B & Cambon-Bonavita M-A Microbial diversity associated with the hydrothermal shrimp Rimicaris exoculata gut and occurrence of a resident microbial community, FEMS microbiology ecology, vol.71, pp.291-303, 2010.

H. Elsaied and . Naganuma, Phylogenetic diversity of ribulose-1,5-bisphosphate carboxylase/oxygenase large-subunit genes from deep-sea microorganisms, Applied and Environmental Microbiology, vol.67, pp.1751-1765, 2001.

H. E. Elsaied, H. Kimura, and . Naganuma, Composition of archaeal, bacterial, and eukaryal RuBisCO genotypes in three Western Pacific arc hydrothermal vent systems, Extremophiles, vol.11, pp.191-202, 2006.

D. Emerson, C. L. Moyer, and . Neutrophilic, Fe-oxidizing bacteria are abundant at the Loihi Seamount hydrothermal vents and play a major role in Fe oxide deposition, Applied and Environmental Microbiology, vol.68, pp.3085-3093, 2002.

D. Emerson, J. A. Rentz, T. G. Lilburn, R. E. Davis, H. Aldrich et al., Moyer CL A novel lineage of proteobacteria involved in formation of marine Fe-oxidizing microbial mat communities, PLoS ONE, vol.2, p.667, 2007.

A. M. Eren and G. G. Borisy, Huse SM & Welch JLM Oligotyping analysis of the human oral microbiome, Proceedings of the National Academy of Sciences, vol.111, pp.2875-2884, 2014.

A. M. Eren, M. Zozaya, C. M. Taylor, and S. E. Dowd, Martin DH & Ferris MJ Exploring the diversity of Gardnerella vaginalis in the genitourinary tract microbiota of monogamous couples through subtle nucleotide variation, PloS one, vol.6, p.26732, 2011.

A. M. Eren, H. G. Morrison, P. J. Lescault, and J. Reveillaud, Vineis JH & Sogin ML Minimum entropy decomposition: Unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences, The ISME Journal, vol.9, pp.968-979, 2014.

A. M. Eren, L. Maignien, W. J. Sul, L. G. Murphy, S. L. Grim et al., Differentiating between closely related microbial taxa using 16S rRNA gene data, Methods in Ecology and Evolution, vol.4, pp.1111-1119, 2013.

M. C. Evans and B. B. Buchanan, Arnon DI A new ferredoxin-dependent carbon reduction cycle in a photosynthetic bacterium, Proceedings of the National Academy of Sciences, vol.55, pp.928-934, 1966.

M. Fabri, A. Bargain, P. Briand, A. Gebruk, and Y. Fouquet, Morineaux M & Desbruyeres D The hydrothermal vent community of a new deep-sea field, Ashadze-1, 12° 58' N on the Mid-Atlantic Ridge, Journal of the Marine Biological Association of the United Kingdom, vol.91, pp.1-13, 2011.

, Felbeck H Chemoautotrophic potential of the hydrothermal vent tube worm, Riftia pachyptila Jones (Vestimentifera), Science, vol.213, pp.336-338, 1981.

C. R. Fisher, Chemoautotrophic and methanotrophic symbioses in marine-invertebrates, Reviews in Aquatic Sciences, vol.2, pp.399-436, 1990.

G. E. Flores, J. H. Campbell, and J. D. Kirshtein, Microbial community structure of hydrothermal deposits from geochemically different vent fields along the Mid-Atlantic Ridge, Environmental Microbiology, vol.13, pp.2158-2171, 2011.

, Forbes E Report on the Mollusca and Radiata of the Aegean Sea: And on Their Distribution, Considered as Bearing on Geology, 1843.

E. Forbes, On the Light Thrown on Geology by Submarine Researches: Being the Substance of a Communication Made to the Royal Institution of Great Britain, friday evening, the 23d, 1844.

. Forbes-e-the, Natural History of the European Seas, 1859.

A. Foucault, J. Raoult, and . De-geólogie, , 2010.

Y. Fouquet, A. Wafik, P. Cambon, C. Mevel, and G. Meyer, Gente P Tectonic setting and mineralogical and geochemical zonation in the Snake Pit sulfide deposit (Mid-Atlantic Ridge at 23 degrees N), Economic geology, vol.88, pp.2018-2036, 1993.

Y. Fouquet, J. L. Charlou, H. Ondreas, J. Radford-knozry, J. P. Donval et al.,

, Eos Trans. AGU, vol.78, p.832, 1997.

Y. Fouquet, J. Charlou, J. Radford-knoery, J. Pelle, P. Ondreas et al., Inter-Ridge News, Segonzac M & Tivey M A detailed study of the Lucky-Strike hydrothermal site and discovery of a new hydrothermal site:«Menez-Gwen». Preliminary results of DIVA 1 cruise, vol.3, pp.14-17, 1994.

Y. Fouquet, G. Cherkashov, J. Charlou, H. Ondréas, D. Birot et al., Serpentine cruise-ultramafic hosted hydrothermal deposits on the Mid-At-lantic Ridge: First submersible studies on Ashadze 1 and 2, Logatchev 2 and Krasnov vent fields, InterRidge News, vol.17, pp.16-21, 2008.

Y. Fouquet, P. Cambon, and J. Etoubleau, Geodiversity of Hydrothermal Processes Along the Mid-Atlantic Ridge and Ultramafic-Hosted Mineralization: a New Type Of Oceanic Cu-Zn-Co-Au Volcanogenic Massive Sulfide Deposit, Diversity Of Hydrothermal Systems On Slow Spreading Ocean Ridges, pp.321-367, 2013.

H. Fricke, O. Giere, K. Stetter, G. A. Alfredsson, and J. K. Kristjansson, Stoffers P & Svavarsson J Hydrothermal vent communities at the shallow subpolar Mid-Atlantic ridge, Marine Biology, vol.102, pp.425-429, 1989.

H. Fuse, M. Ohta, O. Takimura, K. Murakami, H. Inoue et al., Oclarit JM & Omori T Oxidation of trichloroethylene and dimethyl sulfide by a marine Methylomicrobium strain containing soluble methane monooxygenase, Bioscience, biotechnology, and biochemistry, vol.62, pp.1925-1931, 1998.

F. Gaill and D. Desbruyères, Prieur D Bacterial Communities Associated with "Pompei Worms" from the East Pacific Rise Hydrothermal Vents: SEM, TEM Observations, Microbial Ecology, vol.13, pp.129-139, 1987.

A. Gebruk, E. Southward, and H. Kennedy, Southward A Food sources, behaviour, and distribution of hydrothermal vent shrimps at the Mid-Atlantic Ridge, Journal of the Marine Biological Association of the UK, vol.80, pp.485-499, 2000.

A. Gebruk, S. Galkin, Y. Miller, and N. Pimenov, Moskalev L & Ivanov M Trophic structure of the Broken Spur hydrothermal community shown by carbon stable isotope and C: H: N: S data, vol.12, pp.40-44, 1997.

A. V. Gebruk, S. Galkin, and A. Vereshchaka, Moskalev L & Southward A Ecology and biogeography of the hydrothermal vent fauna of the Mid-Atlantic Ridge, Advances in Marine Biology, vol.32, pp.93-144, 1997.

A. V. Gebruk, P. Chevaldonné, T. Shank, and R. A. Lutz, Vrijenhoek RC Deep-sea hydrothermal vent o u ities of the Logat he a ea ° ?N, Mid-Atlantic Ridge): diverse biotopes and high biomass, Journal of the Marine Biological Association of the United Kingdom, vol.80, pp.383-393, 2000.

A. Gloter, M. Zbinden, F. Guyot, F. Gaill, C. Colliex et al., EELS study of natural ferrihydrite from geological-biological interactions in hydrothermal systems, Earth and Planetary Science Letters, vol.222, pp.947-957, 2004.
URL : https://hal.archives-ouvertes.fr/hal-00086566

A. G. Glover, Smith CR The deep-sea floor ecosystem: current status and prospects of anthropogenic change by the year 2025, Environmental Conservation, vol.30, pp.219-241, 2003.

J. F. Grassle, Maciolek NJ Deep-sea species richness: regional and local diversity estimates from quantitative bottom samples, American naturalist, vol.139, pp.313-341, 1992.

O. Gros, M. Liberge, and A. Heddi, Khatchadourian C & Felbeck H Detection of the free-living forms of sulfide-oxidizing gill endosymbionts in the lucinid habitat (Thalassia testudinum environment), Applied and Environmental Microbiology, vol.69, pp.6264-6267, 2003.

D. Guinot and L. A. Hurtado, Two new species of hydrothermal vent crabs of the genus Bythograea from the southern East Pacific Rise and from the Galapagos Rift (Crustacea Decapoda Brachyura Bythograeidae), Comptes Rendus Biologies, vol.326, pp.423-439, 2003.

D. Guinot and L. A. Hurtado, Vrijenhoek R New genus and species of brachyuran crab from the southern East Pacific Rise (Crustacea Decapoda Brachyura Bythograeidae), Comptes rendus biologies, vol.325, pp.1143-1152, 2003.

M. Guri, L. Durand, V. Cueff-gauchard, M. Zbinden, P. Crassous et al., Cambon-Bonavita M-A Acquisition of epibiotic bacteria along the life cycle of the hydrothermal shrimp Rimicaris exoculata, The ISME journal, vol.6, pp.597-609, 2012.

M. D. Hannington and I. R. Jonasson, Herzig PM & Petersen S Physical and chemical processes of seafloo i e alizatio at id-o ea idges, Washington DC American Geophysical Union Geophysical Monograph Series, vol.91, pp.115-157, 1995.

, Haygood MG The potential role of functional differences between Rubisco forms in governing expression in chemoautotrophic symbioses, Limnology and oceanography, vol.41, pp.370-371, 1996.

, Haymon RM Growth history of hydrothermal black smoker chimneys, Nature, vol.301, p.695, 1983.

R. Hékinian, N. Binard, and . Le, Editions Quae, 2008.

I. Hernández-avila and M. A. Cambon-bonavita, Pradillon F Morphology of First Zoeal Stage of Four Genera of Alvinocaridid Shrimps from Hydrothermal Vents and Cold Seeps: Implications for Ecology, Larval Biology and Phylogeny. PloS one, vol.10, p.144657, 2015.

I. Hernández-Ávila and M. Cambon-bonavita, Pradillon F Morphology of First Zoeal Stage of Four Genera of Alvinocaridid Shrimps from Hydrothermal Vents and Cold Seeps: Implications for Ecology, Larval Biology and Phylogeny. PLOS ONE, vol.10, p.144657, 2016.

. Herring-p-the, Biology of the Deep Ocean, 2002.

H. Huber, S. Burggraf, T. Mayer, I. Wyschkony, R. Rachel et al., a novel genus of hyperthermophilic, chemolithoautotrophic Archaea, represented by two new species, Ignicoccus islandicus sp nov and Ignicoccus pacificus sp nov. and Ignicoccus pacificus sp, International Journal of Systematic and Evolutionary Microbiology, vol.50, pp.2093-2100, 2001.

M. Hügler, C. O. Wirsen, G. Fuchs, and C. D. Taylor, Sievert SM Evidence for autotrophic CO2 fixation via the reductive tricarboxylic acid cycle by members of the epsilon subdivision of proteobacteria, Journal of Bacteriology, vol.187, pp.3020-3027, 2005.

M. Hügler, J. M. Petersen, N. Dubilier, and J. F. Imhoff, Sievert SM Pathways of carbon and energy metabolism of the epibiotic community associated with the deep-sea hydrothermal vent shrimp Rimicaris exoculata, PLoS One, vol.6, p.16018, 2011.

C. Jan, J. M. Petersen, J. Werner, H. Teeling, S. Huang et al., Gol shi PN & Je a M The gill ha e epi iosis of deep-sea sh i p Rimicaris exoculata: a idepth metagenomic investigation and discovery of Zetaproteobacteria, Environmental microbiology, vol.16, pp.2723-2738, 2014.

H. W. Jannasch, Mottl MJ Geomicrobiology of deep-sea hydrothermal vents, Science, vol.229, pp.717-725, 1985.

K. S. Johnson and C. L. Beehler, Sakamoto-Arnold CM & Childress JJ In situ measurements of chemical distributions in a deep-sea hydrothermal vent field, Science, vol.231, pp.1139-1141, 1986.

S. B. Johnson, C. R. Young, and W. J. Jones, Warén A & Vrijenhoek RC Migration, isolation, and speciation of hydrothermal vent limpets (Gastropoda

, Lepetodrilidae) across the Blanco Transform Fault, The Biological Bulletin, vol.210, pp.140-157, 2006.

, Karl DM Ecology of free-living, hydrothermal vent microbial communities, 1995.

J. &. Karson, Dick H Tectonics of ridge-transform intersections at the Kane Fracture Zone, Marine Geophysical Researches, vol.6, pp.51-98, 1983.

K. Kashefi, Lovley DR Extending the upper temperature limit for life, Science, vol.301, p.934, 2003.

K. Kashefi, D. E. Holmes, A. L. Reysenbach, and F. Lovley-dr-use-of, III) as an electron acceptor to recover previously uncultured hyperthermophiles: isolation and characterization of Geothermobacterium ferrireducens gen. nov., sp. nov, Applied and Environmental Microbiology, vol.68, pp.1735-1742, 2002.

D. S. Kelley, J. Baross, J. R. Delaney, and . Volcanoes, fluids, and life at mid-ocean ridge spreading centers, Annual Review of Earth and Planetary Sciences, vol.30, pp.385-491, 2002.

D. S. Kelley, J. A. Karson, and D. K. Blackman, An off-axis hydrothermal vent field near the Mid-Atlantic Ridge at 30°N, Nature, vol.412, pp.145-149, 2001.

, Kerr RC Heat transfer and hydrothermal fluid flow at flanges on large seafloor sulphide structures, Earth and Planetary Science Letters, vol.152, pp.93-99, 1997.

E. T. Kiers and R. A. Rousseau, West SA & Denison RF Host sanctions and the legume-rhizobium mutualism, Nature, vol.425, pp.78-81, 2003.

T. Komai, Segonzac M Taxonomic review of the hydrothermal vent shrimp genera Rimicaris Williams & Rona and Chorocaris Martin & Hessler (Crustacea: Decapoda: Caridea: Alvinocarididae), vol.27, pp.21-41, 2008.

A. Koschinsky, A. Billings, C. Devey, N. Dubilier, A. Duester et al., Discovery of new hydrothermal vents on the southern Mid-Atlantic Ridge (4°S-10°S) during cruise M68/1. InterRidge News, vol.15, pp.9-15, 2006.

S. L'haridon, V. Cilia, P. Messner, G. Ragúenès, A. Gambacorta et al., Prieur D & Jeanthon C Desulfurobacterium thermolithotrophum gen. nov., sp. nov., a novel autotrophic, sulphur-reducing bacterium isolated from a deep-sea hydrothermal vent, International journal of systematic bacteriology, 1998.

S. L'haridon, A. L. Reysenbach, B. J. Tindall, P. Schönheit, A. Banta et al., Desulfurobacterium pacificum sp. nov. and Thermovibrio guaymasensis sp. nov., three thermophilic members of the Desulfurobacteriaceae fam. nov., a deep branching lineage within the Bacteria, International Journal of Systematic and Evolutionary Microbiology, vol.56, pp.2843-2852, 2006.

C. Lalou and B. Jl, PA & Tho pso G H d othe al a ti it o a -ea s ale at a slo -sp eadi g idge, TAG h d othe al field, Mid-Atla ti 'idge ° N, Journal of Geophysical Research: Solid Earth, vol.100, pp.17855-17862, 1995.

K. H. Lee, Ruby EG Detection of the light organ symbiont, Vibrio fischeri, in Hawaiian seawater by using lux gene probes, Applied and environmental microbiology, vol.58, pp.942-947, 1992.

M. Lipsitch and M. A. Nowak, Ebert D & May RM The population dynamics of vertically and horizontally transmitted parasites, Proceedings of the Royal Society of London B: Biological Sciences, vol.260, pp.321-327, 1995.

A. P. Lisitsyn, Y. A. Bogdanov, and L. P. Zonenshayn, Kuz'min MI & Podrazhanskiy AM "Black smokers" in the gulf of California, International Geology Review, vol.31, pp.541-555, 1989.

C. T. Little, T. Danelian, R. J. Herrington, R. M. Haymon, and . Early, Jurassic hydrothermal vent community from the Franciscan Complex, California. Journal of Paleontology, vol.78, pp.542-559, 2004.
URL : https://hal.archives-ouvertes.fr/hal-00068796

E. R. Llodra, P. A. Tyler, and J. T. Copley, Reproductive biology of three caridean shrimp, Rimicaris exoculata, Chorocaris chacei and Mirocaris fortunata (Caridea: Decapoda), from hydrothermal vents, Journal of the Marine Biological Association of the United Kingdom, vol.80, pp.473-484, 2000.

, Lonsdale P Clustering of suspension-feeding macrobenthos near abyssal hydrothermal vents at oceanic spreading centers, Deep Sea Research, vol.24, pp.857-863, 1977.

P. Lonsdale and . Becker, Hydrothermal plumes, hot springs, and conductive heat flow in the Southern Trough of Guaymas Basin, Earth and Planetary Science Letters, vol.73, pp.211-225, 1985.

D. R. Lovley, Phillips EJ Availability of ferric iron for microbial reduction in bottom sediments of the freshwater tidal potomac river, Applied and Environmental Microbiology, vol.52, pp.751-757, 1986.

D. R. Lovley, D. Holmes, and . Fe, III) and Mn(IV) Reduction, Advances in Microbial Physiology, vol.49, pp.219-286, 2004.

P. A. Maas, G. D. O'mullan, and R. A. Lutz, Vrijenhoek RC Genetic and morphometric characterization of mussels (Bivalvia: Mytilidae) from mid-atlantic hydrothermal vents, The Biological Bulletin, vol.196, pp.265-272, 1999.

I. R. Macdonald, G. S. Boland, J. S. Baker, and J. M. Brooks, Kennicutt II MC & Bidigare RR Gulf of Mexico hydrocarbon seep communities, Marine Biology, vol.101, pp.235-247, 1989.

M. T. Madigan, J. Martinko, J. Parker, and . Brock-biology-of-microorganisms, , 2000.

S. Markert, C. Arndt, and H. Felbeck, Physiological proteomics of the uncultured endosymbiont of Riftia pachyptila, Science, vol.315, pp.247-250, 2007.

A. G. Marsh and L. S. Mullineaux, Young CM & Manahan DT Larval dispersal potential of the tubeworm Riftia pachyptila at deep-sea hydrothermal vents, Nature, vol.411, pp.77-80, 2001.

J. W. Martin, Hessler RR Chorocaris vandoverae, a new genus and species of hydrothermal vent shrimp (Crustacea, Decapoda, Bresiliidae) from the western Pacific, Natural History Museum of Los Angeles County, vol.417, pp.1-11, 1990.

J. W. Martin, J. Signorovitch, and H. Patel, A new species of Rimicaris (Crustacea: Decapoda: Bresiliidae) from the Snake Pit hydrothermal vent field on the Mid-Atlantic Ridge, Proceedings-Biological society of Washington, vol.110, pp.399-411, 1997.

B. Meyer, Kuever J Molecular analysis of the diversity of sulfate-reducing and sulfur-oxidizing prokaryotes in the environment, using aprA as functional marker gene, Applied and Environmental Microbiology, vol.73, pp.7664-7679, 2007.

B. Meyer, Kuever J Phylogeny of the alpha and beta subunits of the dissimilatory adenosine-?-phosphosulfate (APS) reductase from sulfate-reducing prokaryotes-origin and evolution of the dissimilatory sulfate-reduction pathway, Microbiology, vol.153, pp.2026-2044, 2007.

B. Meyer and J. Kuever, Molecular analysis of the distribution and phylogeny of dissimilatory adenosine-?-phosphosulfate reductase-encoding genes (aprBA) among sulfur-oxidizing prokaryotes, Microbiology, vol.153, pp.3478-3498, 2007.

, Morita RY Is H2 the universal energy source for long-term survival? Microbial ecology, vol.38, pp.307-320, 1999.

S. Nakagawa, Y. Takaki, S. Shimamura, A. Reysenbach, K. Takai et al., Deep-sea vent epsilon-proteobacterial genomes provide insights into emergence of pathogens, Proceedings of the National Academy of Sciences, vol.104, pp.12146-12150, 2007.

, Nealson KH Sediment bacteria: who's there, what are they doing, and what's new?, Annual Review of Earth and Planetary Sciences, vol.25, pp.403-434, 1997.

, Norton DL Theory of hydrothermal systems, Annual Review of Earth and Planetary Sciences, vol.12, p.155, 1984.

D. J. Nuckley, R. N. Jinks, B. Battelle, E. D. Herzog, L. Kass et al., Species of Bresiliid Shrimp from a Hydrothermal Vent Field on the Mid-Atlantic Ridge, vol.190, pp.98-110, 1996.

V. Nye, J. Copley, S. Plouviez, . New, and . Of-rimicaris, Crustacea: Decapoda: Caridea: Alvinocarididae) from hydrothermal vent fields on the Mid-Cayman Spreading Centre, Caribbean, Journal of the Marine Biological Association of the United Kingdom, vol.92, pp.1057-1072, 2012.

G. D. O'mullan, P. Maas, and R. A. Lutz, Vrijenhoek RC A hybrid zone between hydrothermal vent ussels Bi al ia: M tilidae f o the Mid-Atla ti 'idge, Molecular Ecology, vol.10, pp.2819-2831, 2001.

P. J. O'neill, R. N. Jinks, E. D. Herzog, B. A. Battelle, and L. Kass, Renninger GH & Chamberlain SC The morphology of the dorsal eye of the hydrothermal vent shrimp, Rimicaris exoculata, Visual Neurosci, vol.12, pp.861-875, 1995.

C. K. Paull, B. Hecker, R. Commeau, R. P. Freeman-lynde, C. Neumann et al., Sikes E & Curray J Biological communities at the Florida escarpment resemble hydrothermal vent taxa, Science, vol.226, pp.965-967, 1984.

D. G. Pelli, Chamberlain SC The visibility of 350 C black-body radiation by the shrimp Rimicaris exoculata and man, Nature, vol.337, pp.460-461, 1989.

J. M. Pete-se, A. Lott, and C. , Ca o -Bo a ita MA, ) i de M & Du ilie N Dual s iosis of the vent shrimp Rimicaris exoculata with filamentous gamma-a d epsilonproteobacteria at four Mid-Atla ti 'idge h d othe al e t fields, Environmental microbiology, vol.12, pp.2204-2218, 2010.

J. M. Petersen, F. U. Zielinski, T. Pape, R. Seifert, C. Moraru et al., Wankel SD & Barbe V Hydrogen is an energy source for hydrothermal vent symbioses, Nature, vol.476, pp.176-180, 2011.

E. Pikuta, A. Lysenko, N. Suzina, G. Osipov, B. Kuznetsov et al., a new alkaliphilic, moderately thermophilic, sulfate-reducing bacterium, International Journal of Systematic and Evolutionary Microbiology, vol.50, pp.25-33, 2000.

R. A. Pockalny, Detrick RS & Fox PJ Morphology and tectonics of the Kane transform from Sea Beam bathymetry data, Journal of Geophysical Research, vol.93, pp.3179-3193, 1988.

M. F. Polz, Cavanaugh CM Dominance of one bacterial phylotype at a Mid-Atlantic Ridge hydrothermal vent site, Proceedings of the National Academy of Sciences, vol.92, pp.7232-7236, 1995.

M. F. Polz, J. J. Robinson, C. Cavanaugh, C. L. Van-dover, and . Trophic, Ecology of Massive Shrimp Aggregations at a Mid-Atlantic Ridge Hydrothermal Vent Site, Limnology and Oceanography, vol.43, pp.1631-1638, 1998.

D. W. Pond, D. R. Dixon, M. V. Bell, A. Fallick, J. R. Sargent et al., (n-4) fatty acids in the lipids of the hydrothermal vent shrimps Rimicaris exoculata and Alvinocaris markensis: nutritional and trophic implications, Mar Ecol Prog Ser, vol.16, issue.2, pp.167-174, 1998.

J. Ponsard, M. A. Cambon-bonavita, M. Zbinden, G. Lepoint, A. Joassin et al., Cueff-Gauchard V & Compere P Inorganic carbon fixation by chemosynthetic ectosymbionts and nutritional transfers to the hydrothermal vent host-shrimp Rimicaris exoculata, Isme J, vol.7, pp.96-109, 2013.

J. Ponsard, M. Cambon-bonavita, M. Zbinden, G. Lepoint, A. Joassin et al., Cueff-Gauchard V & Compère P Inorganic carbon fixation by chemosynthetic ectosymbionts and nutritional transfers to the hydrothermal vent host-shrimp Rimicaris exoculata, The ISME journal, vol.7, pp.96-109, 2013.

. Prieur-d-un-enfer-très-fécond and . Biofutur, , pp.25-27, 1998.

R. Quatrini, V. Martínez, and H. Osorio, Iron homeostasis strategies in acidophilic iron oxidizers: comparative genomic analyses, Advanced Materials Research, p.531, 2007.

R. Rabus and T. A. Hansen, Widdel F Dissimilatory sulfate-and sulfur-reducing prokaryotes, The Prokaryotes, vol.2, pp.659-768, 2006.

E. Ramirez-llodra, P. A. Tyler, M. C. Baker, O. A. Bergstad, M. R. Clark et al., Rowden AA & Smith CR Man and the last great wilderness: human impact on the deep sea, PLoS One, vol.6, p.22588, 2011.

A. Reysenbach, N. Hamamura, and M. Podar, Complete and draft genome sequences of six members of the Aquificales, Journal of Bacteriology, vol.191, pp.1992-1993, 2009.

G. A. Riley, D. Van-hemert, and P. J. Wangersky, Organic aggregates in surface and deep waters of the Sargasso Sea, Limnol. Oceanogr, vol.10, pp.345-363, 1965.

J. J. Robinson, Cavanaugh CM Expression of form I and form II Rubisco in chemoautotrophic symbioses: implications for the interpretation of stable carbon isotope values, Limnology and Oceanography, vol.40, pp.1496-1502, 1995.

P. A. Rona, M. D. Hannington, C. Raman, G. Thompson, M. K. Tivey et al., Lalou C & Petersen S Active and Reliet Sea-Floor Hydrothermal Mineralization at the TAG Hydrothermal Field, Mid-Atlantic Ridge, Economic Geology, vol.88, pp.1989-1989, 1993.

J. Ross, voyage of discovery: made under the orders of the Admiralty, in His Majesty's ships Isabella and Alexander, for the purpose of exploring Baffin's Bay, and inquiring into the probability of a north-west passage, J. Murray, 1819.

J. L. Salerno, S. A. Macko, S. J. Hallam, M. Bright, Y. Won et al., Characterization of Symbiont Populations in Life-History Stages of Mussels from Chemosynthetic Environments, Biological Bulletin, vol.208, pp.145-155, 2005.

J. Sarrazin, V. Robigou, S. Juniper, and J. R. Delaney, Biological and geological dynamics over four years on a high-temperature sulfide structure at the Juan de Fuca Ridge hydrothermal observatory, Mar Ecol Prog Ser, vol.153, pp.5-24, 1997.

C. Schmidt and L. Bris, Gaill F Interactions of deep-sea vent invertebrates with their environment: the case of Rimicaris exoculata, Journal of Shellfish Research, vol.27, pp.79-90, 2008.

K. Schmidt, A. Koschinsky, D. Garbe-schönberg, D. Carvalho, and L. Seifert, Geochemistry of hydrothermal fluids from the ultramafic-hosted Logatchev hydrothermal field, 15°N on the Mid-Atlantic Ridge: Temporal and spatial investigation, vol.242, pp.1-21, 2007.

K. M. Scott and J. Schwedock, Schrag DP & Cavanaugh CM Influence of form IA RubisCO and environmental dissolved inorganic carbon on the ? C of the la -he oautot oph symbiosis Solemya velum, Environmental Microbiology, vol.6, pp.1210-1219, 2004.

K. M. Scott, M. Henn-sax, T. L. Harmer, and D. L. Longo, Frame CH & Cavanaugh CM Kinetic isotope effect and biochemical characterization of form IA RubisCO from the marine cyanobacterium Prochlorococcus marinus MIT9313, Limnology and Oceanography, vol.52, pp.2199-2204, 2007.

, Segonzac M Les peuplements associés à l'hydrothermalisme océanique du Snake Pit (dorsale médio-atlantique; 23 N, 3480 m): composition et microdistribution de la mégafaune, vol.314, pp.593-600, 1992.

M. Segonzac, M. Desaintlaurent, and B. Casanova, Enigma of the trophic adaptation of the shrimp Alvinocarididae in hydrothermal areas along the Mid-Atlantic Ridge, Cah Biol Mar, vol.34, pp.535-571, 1993.

M. A. Selosse and . La, symbiose: structures et fonctions, rôle écologique et évolutif. Vuibert, 2000.

H. Shiba, T. Kawasumi, Y. Igarashi, T. Kodama, and Y. Minoda, The CO2 assimilation via the reductive tricarboxylic acid cycle in an obligately autotrophic, aerobic hydrogen-oxidizing bacterium, Hydrogenobacter thermophilus, Archives of Microbiology, vol.141, pp.198-203, 1985.

T. Shigematsu, S. Hanada, M. Eguchi, Y. Kamagata, T. Kanagawa et al., Soluble methane monooxygenase gene clusters from trichloroethylene-degrading Methylomonas sp. strains and detection of methanotrophs during in situ Bioremediation, Applied and Environmental Microbiology, vol.65, pp.5198-5206, 1999.

B. Shillito, G. Hamel, C. Duchi, D. Cottin, J. Sarrazin et al., Live capture of megafauna from 2300m depth, using a newly designed pressurized recovery device, Deep Sea Research Part I: Oceanographic Research Papers, vol.55, pp.881-889, 2008.

J. M. Shively, G. Van-keulen, and W. G. Meijer, Something from almost nothing: carbon dioxide fixation in chemoautotrophs, Annual Review of Microbiology, vol.52, pp.191-230, 1999.

D. D. Shoemaker, C. A. Machado, D. Molbo, J. H. Werren, and D. M. Windsor, Herre EA The distribution of Wolbachia in fig wasps: correlations with host phylogeny, ecology and population structure, Proceedings of the Royal Society B: Biological Sciences, vol.269, pp.2257-2267, 2002.

S. M. Sievert, K. M. Scott, and M. G. Klotz, Genome of the epsilonproteobacterial chemolithoautotroph Sulfurimonas denitrificans. Applied and Environmental Microbiology, vol.74, pp.1145-1156, 2008.

D. Smith, A. E. Douglas, . E. The, and . Arnold, he ais JW & Hopso CA The ol a i -te to i le of the FAMOU" a d AMA' Valle s, Mid-Atla ti 'idge ° ? N : E ide e f o asalt glass a d phe o st ompositional variations for a Steady State MagmaChamber Beneath the Valley Midsections, AMAR 3 Journal of Geophysical Research: Solid Earth, vol.89, pp.2132-2153, 1967.

F. R. Tabita, S. Satagopan, T. E. Hanson, N. Kreel, S. S. Scott et al., Rubisco proteins from the three kingdoms of life provide clues about Rubisco evolution and structure/function relationships, Journal of Experimental Botany, vol.59, pp.1515-1524, 2008.

K. Takai, S. Nakagawa, Y. Sako, and . Horikoshi-k-balnearium-lithotrophicum-gen.-nov, a novel thermophilic, strictly anaerobic, hydrogen-oxidizing chemolithoautotroph isolated from a black smoker chimney in the Suiyo Seamount hydrothermal system, International Journal of Systematic and Evolutionary Microbiology, vol.53, pp.1947-1954, 2003.

S. Teixeira and E. A. Serrao, Arnaud-Haond S Panmixia in a fragmented and unstable environment: the hydrothermal shrimp Rimicaris exoculata disperses extensively along the Mid-Atlantic Ridge, PLoS One, vol.7, p.38521, 2012.

. Tei-ei-a-", M. A. Ca-o--bo-a-ita, . Ea, and . Des-u-e-es-d-&-a-aud-hao, e e t population expansion and connectivity in the hydrothermal shrimp Rimicaris exoculata alo g the Mid-Atlantic Ridge, J Biogeogr, vol.38, pp.564-574, 2011.

G. Thompson, S. E. Humphris, and B. Schroeder, Sulanowska M & Rona PA Active vents and massive sulfides at 26 degrees N (TAG) and 23 degrees N (Snakepit) on the Mid-Atlantic Ridge, The Canadian Mineralogist, vol.26, pp.697-711, 1988.

, Tivey MK Generation of seafloor hydrothermal vent fluids and associated mineral deposits, Oceanography, vol.20, p.50, 2007.

M. K. Tivey, S. E. Humphris, and G. Thompson, Hannington MD & Rona PA Deducing patterns of fluid flow and mixing within the TAG active hydrothermal mound using mineralogical and geochemical data, Journal of Geophysical Research: Solid Earth, vol.100, pp.12527-12555, 1995.

V. Tunnicliffe and S. K. Juniper, Sibuet M Reducing environments of the deep-sea floor, Ecosystems of the World, 2003.

P. A. Tyler, Young CM Reproduction and dispersal at vents and cold seeps, Journal of the Marine Biological Association of the United Kingdom, vol.79, pp.193-208, 1999.

J. Valdés, R. Quatrini, K. Hallberg, and M. Dopson, Valenzuela PDT & Holmes DS Draft genome sequence of the extremely acidophilic bacterium Acidithiobacillus caldus ATCC 51756 reveals metabolic versatility in the genus Acidithiobacillus, Journal of Bacteriology, vol.191, pp.5877-5878, 2009.

J. H. Valdés, I. Pedroso, R. Quatrini, and K. B. Hallberg, Valenzuela PDT & Holmes DS Insights into the metabolism and ecophysiology of three Acidithiobacilli by comparative genome analysis, Advanced Materials Research, vol.20, pp.439-442, 2007.

C. Van-dover, The Ecology of Deep-sea Hydrothermal Vents, 2000.

C. L. Van-dover, Ecology of mid-Atlantic ridge hydrothermal vents, Geological Society, vol.87, pp.257-294, 1995.

C. L. Van-dover and E. Z. Szuts, Chamberlain SC & Cann JR A novel eye in'eyeless' shrimp from hydrothermal vents of the Mid-Atlantic Ridge, Nature, vol.337, pp.458-460, 1989.

C. L. Van-dover, B. Fry, and J. F. Grassle, Humphris S & Rona PA Feeding biology of the shrimp Rimicaris exoculata at hydrothermal vents on the Mid-Atlantic Ridge, Marine Biology, vol.98, pp.209-216, 1988.

A. L. Vereshchaka, D. Kulagin, and . Lunina, AA Phylogeny and new classification of hydrothermal vent and seep shrimps of the family Alvinocarididae (Decapoda), PloS one, vol.10, p.129975, 2015.

C. Vetriani, M. D. Speck, S. V. Ellor, R. A. Lutz, and . Starovoytov-v-thermovibrio-ammonificans-sp.-nov, a thermophilic, chemolithotrophic, nitrate-ammonifying bacterium from deep-sea hydrothermal vents, International Journal of Systematic and Evolutionary Microbiology, vol.54, pp.175-181, 2004.

H. Watabe and J. Hashimoto, Alvinocarididae: Caridea: De apoda f o the a ti e h d othe al e t field, Kai ei Field, o the Ce t al I dia 'idge, the Indian Ocean, A new species of the genus Rimicaris, vol.19, pp.1167-1174, 2002.

L. Watling, J. Guinotte, and M. R. Clark, Smith CR A proposed biogeography of the deep ocean floor, Progress in Oceanography, vol.111, pp.91-112, 2013.

T. Watsuji, S. Nakagawa, S. Tsuchida, T. Toki, and A. Hirota, Tsunogai U & Takai K Diversity and Function of Epibiotic Microbial Communities on the Galatheid Crab, vol.25, pp.288-294, 2010.

J. J. Wernegreen, P. H. Degnan, A. B. Lazarus, C. Palacios, and S. R. Bordenstein, Genome evolution in an insect cell: distinct features of an ant-bacterial partnership, The Biological Bulletin, vol.204, pp.221-231, 2003.

A. Williams and P. A. Rona, Two new caridean shrimps (Bresiliidae) from a hydrothermal field on the Mid-Atlantic Ridge, Journal of Crustacean Biology, vol.6, pp.446-462, 1986.

Y. Wo, Y. , and C. Lutz, A Dispe sal a ie s a d isolatio a o g deep-sea ussel populatio s (Mytilidae: Bathymodiolus) from eastern Pacific hydrothermal vents, Molecular Ecology, vol.12, pp.169-184, 2003.

A. Yarzábal, G. Brasseur, and V. Bonnefoy, Cytochromes c of Acidithiobacillus ferrooxidans. FEMS Microbiology Letters, vol.209, pp.189-195, 2002.

A. Yarzábal, C. Appia-ayme, J. Ratouchniak, and . Bonnefoy, Regulation of the expression of the Acidithiobacillus ferrooxidans rus operon encoding two cytochromes c, a cytochrome oxidase and rusticyanin, Microbiology, vol.150, pp.2113-2123, 2004.

A. Zachary, Colwell RR Gut-associated microflora of Limnoria tripunctata in marine creosotetreated wood pilings, Nature, vol.282, pp.716-717, 1979.

A. Zachary and K. K. Parrish, Bultman JD Possible role of marine bacteria in providing the creosoteresistance of Limnoria tripunctata, Marine Biology, vol.75, pp.1-8, 1983.

M. Zbinden and M. &-cambon-bonavita, Occurrence of Deferribacterales and Entomoplasmatales in the deep-sea Alvinocarid shrimp Rimicaris exoculata gut, FEMS microbiology ecology, vol.46, pp.23-30, 2003.

M. Zbinden, L. Bris, N. Gaill, and F. , Compère P Distribution of bacteria and associated minerals in the gill chamber of the vent shrimp Rimicaris exoculata and related biogeochemical processes, Mar Ecol Prog Ser, vol.284, pp.237-251, 2004.

M. Zbinden, B. Shillito, L. Bris, N. De-montlaur, C. Roussel et al., New insigths on the metabolic diversity among the epibiotic microbial communitiy of the hydrothermal shrimp Rimicaris exoculata, J Exp Mar Biol Ecol, vol.359, pp.131-140, 2008.