P. S. Adam and G. Borrel, The Growing Tree of Archaea: New Perspectives on Their Diversity, Evolution and Ecology, ISME Journal, vol.11, issue.11, pp.2407-2432, 2017.

S. I. Ahmad, S. H. Kirk, and A. Eisenstark, Thymine Metabolism and Thymineless Death in Prokaryotes and Eukaryotes, Annual Review of Microbiology, vol.52, issue.1, pp.591-625, 2002.

S. -. Albers, B. Verena, and . Meyer, The Archaeal Cell Envelope, Nature Reviews. Microbiology, vol.9, issue.6, pp.414-440, 2011.

S. Albers, K. F. Verena, and . Jarrell, The Archaellum: An Update on the Unique Archaeal Motility Structure, Trends in Microbiology, vol.26, issue.4, pp.351-62, 2018.

T. Allers, S. Barak, S. Liddell, K. Wardell, and M. Mevarech, Improved Strains and Plasmid Vectors for Conditional Overexpression of His-Tagged Proteins in Haloferax Volcanii, Applied and Environmental Microbiology, vol.76, issue.6, pp.1759-69, 2010.

T. Allers, H. Ngo, M. Mevarech, and R. Lloyd, Development of Additional Selectable Markers for the Halophilic Archaeon, Applied and Environmental Microbiology, vol.70, issue.2, 2004.

,

. Asai, D. B. Tsuneaki, T. Bates, and . Kogoma, DNA Replication Triggered by Double-Stranded Breaks in E. Coli: Dependence on Homologous Recombination Functions, Cell, vol.78, issue.6, pp.1051-61, 1994.

,

J. Attwater, A. Wochner, B. Vitor, A. Pinheiro, P. Coulson et al., Ice as a Protocellular Medium for RNA Replication, Nature Communications, vol.1, issue.6, pp.1-8, 2010.

E. R. Barry and S. D. Bell, DNA Replication in the Archaea, Microbiology and Molecular Biology Reviews, vol.70, issue.4, pp.876-87, 2006.

T. R. Beattie and S. D. Bell, Coordination of Multiple Enzyme Activities by a Single PCNA in Archaeal Okazaki Fragment Maturation, EMBO Journal, vol.31, issue.6, pp.1556-67, 2012.

,

M. B. Berkmen and A. D. Grossman, Spatial and Temporal Organization of the Bacillus Subtilis Replication Cycle, Molecular Microbiology, vol.62, issue.1, pp.57-71, 2006.

B. R. Berquist, P. Dassarma, and S. Dassarma, Essential and Non-Essential DNA Replication Genes in the Model Halophilic Archaeon, Halobacterium Sp. NRC-1, BMC Genetics, vol.8, pp.1-13, 2007.

,

. Bitan-banin, R. Gili, M. Ortenberg, and . Mevarech, Development of a Gene Knockout System for the Halophilic Archaeon, Journal of Bacteriology, vol.185, issue.3, pp.772-78, 2003.

J. Born and F. Pfeifer, Improved GFP Variants to Study Gene Expression in Haloarchaea, Frontiers in Microbiology, vol.10, 2019.

C. Boudreau, Y. R. Tse-luen-wee, M. P. Duh, . Couto, H. Kimya et al., Excitation Light Dose Engineering to Reduce Photo-Bleaching and Photo-Toxicity, Scientific Reports, vol.6, pp.1-12, 2016.

W. Brett, L. Burkhart, B. Cubonova, M. R. Heider, Z. Kelman et al.,

. Santangeloa, The GAN Exonuclease or the Flap Endonuclease Fen1 and RNase HII Are Necessary for Viability of Thermococcus Kodakarensis, vol.199, pp.1-8, 2017.

S. Breuert, T. Allers, G. Spohn, and J. Soppa, Regulated Polyploidy in Halophilic Archaea, PLoS ONE, vol.1, issue.1, 2006.

C. Brochier-armanet, B. Boussau, S. Gribaldo, and P. Forterre, Mesophilic Crenarchaeota: Proposal for a Third Archaeal Phylum, the Thaumarchaeota, Nature Reviews Microbiology, vol.6, issue.3, pp.245-52, 2008.
URL : https://hal.archives-ouvertes.fr/hal-00256781

G. Cannone, Y. Xu, T. R. Beattie, S. D. Bell, and L. Spagnolo, The Architecture of an Okazaki Fragment-Processing Holoenzyme from the Archaeon Sulfolobus Solfataricus, Biochemical Journal, vol.465, pp.239-284, 2015.

A. Clarke, G. Morris, F. Fonseca, B. J. Murray, E. Acton et al., A Low Temperature Limit for Life on Earth, PLoS ONE, vol.8, issue.6, 2013.
URL : https://hal.archives-ouvertes.fr/hal-01190603

J. A. Coker, P. Dassarma, M. Capes, T. Wallace, K. Mcgarrity et al., Multiple Replication Origins of Halobacterium Sp. Strain NRC-1: Properties of the Conserved Orc7-Dependent OriC1, Journal of Bacteriology, vol.191, issue.16, pp.5253-61, 2009.

D. Cortez, S. Quevillon-cheruel, S. Gribaldo, N. Desnoues, P. Forterre et al., Evidence for a Xer / Dif System for Chromosome Resolution in, Archaea, issue.6, 2010.

,

C. Cvetic and J. C. Walter, Eukaryotic Origins of DNA Replication: Could You Please Be More Specific?, Seminars in Cell and Developmental Biology, vol.16, issue.3, pp.343-53, 2005.

,

. Delmas, I. G. Stéphane, T. Duggin, and . Allers, DNA Damage Induces Nucleoid Compaction via the Mre11-Rad50 Complex in the Archaeon Haloferax Volcanii, Molecular Microbiology, vol.87, issue.1, pp.168-79, 2013.

,

E. F. Delong and N. R. Pace, Environmental Diversity of Bacteria and Archaea, Systematic Biology, vol.50, issue.4, pp.470-78, 2001.

F. Delpech, Dynamique cellulaire des protéines de la réplication chez l'archée halophile Haloferax volcanii, 2016.

F. Delpech, Y. Collien, P. Mahou, E. Beaurepaire, H. Myllykallio et al., Snapshots of Archaeal DNA Replication and Repair in Living Cells Using Super-Resolution Imaging, Nucleic Acids Research, vol.46, pp.10757-70, 1920.
URL : https://hal.archives-ouvertes.fr/hal-01874282

I. G. Duggin, N. Dubarry, and S. D. Bell, Replication Termination and Chromosome Dimer Resolution in the Archaeon Sulfolobus Solfataricus, EMBO Journal, vol.30, issue.1, pp.145-53, 2011.

,

L. Eme, A. Spang, J. Lombard, C. W. Stairs, J. G. Thijs et al., Archaea and the Origin of Eukaryotes, Nature Reviews Microbiology, vol.15, issue.12, pp.711-734, 2017.

T. Ettema, A. C. Lindås, and R. Bernander, An Actin-Based Cytoskeleton in Archaea, Molecular Microbiology, vol.80, issue.4, pp.1052-61, 2011.

P. Forterre, C. Elie, and M. Kohiyama, Aphidicolin Inhibits Growth and DNA Synthesis in Halophilic Archaebacteria, Journal of Bacteriology, vol.159, issue.2, pp.800-802, 1984.

P. Forterre, The Universal Tree of Life: An Update, Frontiers in Microbiology, vol.6, pp.1-18, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01430756

A. M. Gehring, P. David, R. Astling, B. W. Matsumi, Z. Burkhart et al., Genome Replication in Thermococcus Kodakarensis Independent of Cdc6 and an Origin of Replication, Frontiers in Microbiology, vol.8, pp.1-10, 2017.

G. Boeuf, La Biodiversité, de l'océan à La Cité, Les comptes rendus. Http://Journals.Openedition.Org/Lectures. CNDP-CRDP, 2014.

K. Gottlieb, V. Wacher, J. Sliman, and M. Pimentel, Review Article: Inhibition of Methanogenic Archaea by Statins as a Targeted Management Strategy for Constipation and Related Disorders, Alimentary Pharmacology and Therapeutics, vol.43, issue.2, pp.197-212, 2016.

L. Greenough, Z. Kelman, and A. F. Gardner, The Roles of Family B and D DNA Polymerases in Thermococcus Species 9°N Okazaki Fragment Maturation, Journal of Biological Chemistry, vol.290, issue.20, pp.12514-12536, 2015.

. Gristwood, I. G. Tamzin, M. Duggin, S. V. Wagner, S. D. Albers et al., The Sub-Cellular Localization of Sulfolobus DNA Replication, Nucleic Acids Research, vol.40, issue.12, pp.5487-96, 2012.

,

M. Gustafsson, Surpassing the Lateral Resolution Limit by a Factor of Two Using Structured Illumination Microscopy, Journal of Microscopy, vol.198, pp.82-87, 2000.

A. L. Hartman, C. Norais, J. H. Badger, S. Delmas, S. Haldenby et al., The Complete Genome Sequence of Haloferax Volcanii DS2, a Model Archaeon, PLoS ONE, vol.5, issue.3, 2010.

M. Hawkins, S. Malla, J. Martin, C. A. Blythe, T. Nieduszynski et al., Accelerated Growth in the Absence of DNA Replication Origins, Nature, vol.503, issue.7477, pp.544-591, 2013.

,

S. W. Hell and J. Wichmann, Breaking the Diffraction Resolution Limit by Stimulated Emission: Stimulated-Emission-Depletion Fluorescence Microscopy, Optics Letters, vol.19, issue.11, p.780, 1994.

G. Henneke, In Vitro Reconstitution of RNA Primer Removal in Archaea Reveals the Existence of Two Pathways, Biochemical Journal, vol.447, issue.2, pp.271-80, 2012.
URL : https://hal.archives-ouvertes.fr/hal-00773151

G. Henneke, D. Flament, U. Hübscher, J. Querellou, and J. Paul-raffin, The Hyperthermophilic Euryarchaeota Pyrococcus Abyssi Likely Requires the Two DNA Polymerases D and B for DNA Replication, Journal of Molecular Biology, vol.350, issue.1, pp.53-64, 2005.

K. Hjort and R. Bernander, Cell Cycle Regulation in the Hyperthermophilic Crenarchaeon Sulfolobus Acidocaldarius, Molecular Microbiology, vol.40, issue.1, pp.225-259, 2001.

G. Hogrel, Y. Lu, S. Laurent, E. Henry, C. Etienne et al., Physical and Functional Interplay between PCNA DNA Clamp and Mre11-Rad50 Complex from the, 2018.
URL : https://hal.archives-ouvertes.fr/hal-02390072

A. Pyrococcus and F. , Nucleic Acids Research, vol.46, issue.11, pp.5651-63

L. A. Hug, J. Brett, K. Baker, C. T. Anantharaman, A. J. Brown et al., A New View of the Tree of Life, Nature Microbiology, vol.1, issue.5, pp.1-6, 2016.

Y. Ishino and S. Ishino, Rapid Progress of DNA Replication Studies in Archaea, the Third Domain of Life, Science China Life Sciences, vol.55, issue.5, pp.386-403, 2012.

T. Iwai, N. Kurosawa, Y. H. Itoh, N. Kimura, and T. Horiuchi, Sequence Analysis of Three Family B DNA Polymerases from the Thermoacidophilic Crenarchaeon Sulfurisphaera Ohwakuensis, DNA Research, vol.7, issue.4, pp.243-51, 2000.

R. B. Jensen, C. Sherry, L. Wang, and . Shapiro, A Moving DNA Replication Factory in Caulobacter Crescentus, EMBO Journal, vol.20, issue.17, pp.4952-63, 2001.

A. Kaykov, T. Taillefumier, A. Bensimon, and P. Nurse, Molecular Combing of Single DNA Molecules on the 10 Megabase Scale, Scientific Reports, vol.6, pp.80-84, 2016.

L. M. Kelman and Z. Kelman, Archaeal DNA Replication, Annual Review of Genetics, vol.48, issue.1, pp.71-97, 2014.

B. K. Kennedy, A. David, M. Barbie, N. Classon, E. Dyson et al., Nuclear Organization of DNA Replication in Primary Mammalian Cells, pp.2855-68, 2000.

K. Koberna, A. Ligasová, J. Malínský, A. Pliss, A. J. Siegel et al., Electron Microscopy of DNA Replication in 3-D: Evidence for Similar-Sized Replication Foci throughout S-Phase, Journal of Cellular Biochemistry, vol.94, issue.1, pp.126-164, 2005.

T. Kushida, I. Narumi, S. Ishino, Y. Ishino, S. Fujiwara et al., Pol B, a Family B DNA Polymerase, in Thermococcus Kodakarensis Is Important for DNA Repair, but Not DNA Replication, Microbes and Environments, vol.34, issue.3, pp.316-342, 2019.

,

C. Lange, K. Zerulla, S. Breuert, and J. Soppa, Gene Conversion Results in the Equalization of Genome Copies in the Polyploid Haloarchaeon Haloferax Volcanii, Molecular Microbiology, vol.80, issue.3, pp.666-77, 2011.

S. Lao-sirieix, S. D. Houy, and . Bell, The Heterodimeric Primase of the Hyperthermophilic Archaeon Sulfolobus Solfataricus Possesses DNA and RNA Primase, Polymerase and 3?-Terminal Nucleotidyl Transferase Activities, Journal of Molecular Biology, vol.344, issue.5, pp.1251-63, 2004.

H. Leonhardt, H. Rahn, P. Weinzierl, A. Sporbert, T. Cremer et al., Dynamics of DNA Replication Factories in Living Cells, vol.149, pp.271-79, 2000.

R. Lestini, F. Delpech, and H. Myllykallio, DNA Replication Restart in Archaea, Advances in DNA Repair, i:13. InTech, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01275161

R. Lestini, S. P. Laptenok, J. Kühn, M. A. Hink, M. C. Schanne-klein et al., Intracellular Dynamics of Archaeal FANCM Homologue Hef in Response to Halted DNA Replication, Nucleic Acids Research, vol.41, issue.22, pp.10358-70, 2013.
URL : https://hal.archives-ouvertes.fr/hal-00942476

M. Z. Li and S. J. Elledge, Harnessing Homologous Recombination in Vitro to Generate Recombinant DNA via SLIC, Nature Methods, vol.4, issue.3, pp.251-56, 2007.

Y. Liu and W. B. Whitman, Metabolic, Phylogenetic, and Ecological Diversity of the Methanogenic Archaea, Annals of the New York Academy of Sciences, vol.1125, pp.171-89, 2008.

K. Ludt and J. Soppa, Influence of Origin Recognition Complex Proteins on the Copy Numbers of Three Chromosomes in Haloferax Volcanii, Journal of Bacteriology, vol.200, issue.17, pp.1-13, 2018.

. Lurie-weinberger, N. Mor, and U. Gophna, Archaea in and on the Human Body: Health Implications and Future Directions, PLOS Pathogens, vol.11, issue.6, p.1004833, 2015.

. Magdalou, B. S. Indiana, P. Lopez, S. A. Pasero, and . Lambert, The Causes of Replication Stress and Their Consequences on Genome Stability and Cell Fate, Seminars in Cell and Developmental Biology, vol.30, pp.154-64, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01087711

M. Nagata1, S. Ishino1, *. , T. Yamagami1, and H. Ogino1, The Cdc45 / RecJ-like Protein Forms a Complex with GINS and MCM , and Is Important for DNA Replication in Thermococcus Kodakarensis, vol.45, pp.10693-705, 2017.

,

F. Matsunaga, P. Forterre, Y. Ishino, and H. Myllykallio, In Vivo Interactions of Archaeal Cdc6/Orc1 and Minichromosome Maintenance Proteins with the Replication Origin, Proceedings of the National Academy of Sciences of the United States of America, vol.98, pp.11152-57, 1920.

,

F. Matsunaga, A. Glatigny, M. H. Mucchielli-giorgi, N. Agier, H. Delacroix et al., Genomewide and Biochemical Analyses of DNA-Binding Activity of Cdc6/Orc1 and Mcm Proteins in Pyrococcus Sp, Nucleic Acids Research, vol.35, issue.10, pp.3214-3236, 2007.
URL : https://hal.archives-ouvertes.fr/hal-00167503

C. Moissl-eichinger, M. Pausan, J. Taffner, G. Berg, C. Bang et al., Archaea Are Interactive Components of Complex Microbiomes, Trends in Microbiology, vol.26, issue.1, pp.70-85, 2018.

M. F. Mullakhanbhai and H. Larsen, Halobacterium Volcanii Spec. Nov., a Dead Sea Halobacterium with a Moderate Salt Requirement, Archives of Microbiology, 1975.

A. Müller-taubenberger and K. I. Anderson, Recent Advances Using Green and Red Fluorescent Protein Variants, Applied Microbiology and Biotechnology, vol.77, issue.1, pp.1-12, 2007.

C. A. Müller, A. Michael, P. Boemo, . Spingardi, M. Benedikt et al., Capturing the Dynamics of Genome Replication on Individual Ultra-Long Nanopore Sequence Reads, Nature Methods, vol.16, issue.5, pp.429-465, 2019.

. Myllykallio, . Hannu, . Lopez, . Lopez-garcia, P. Heilig et al., Bacterial Mode of Replication with Eukaryotic-Like Machinery in a Hyperthermophilic Archaeon, Science, vol.288, pp.2212-2227, 2000.

H. Myllykallio, P. Sournia, A. Heliou, and U. Liebl, Unique Features and Anti-Microbial Targeting of Folate-and Flavin-Dependent Methyltransferases Required for Accurate Maintenance of Genetic Information, Frontiers in Microbiology, vol.9, pp.1-11, 2018.
URL : https://hal.archives-ouvertes.fr/hal-01873302

A. B. Neef and N. W. Luedtke, Dynamic Metabolic Labeling of DNA in Vivo with Arabinosyl Nucleosides, Proceedings of the National Academy of Sciences, vol.108, issue.51, pp.20404-20413, 2011.

C. Norais, M. Hawkins, A. L. Hartman, and J. A. Eisen, Genetic and Physical Mapping of DNA Replication Origins in Haloferax Volcanii, PLoS Genetics, vol.3, issue.5, pp.729-772, 2007.
URL : https://hal.archives-ouvertes.fr/hal-00195310

. O'donnell, L. Michael, B. Langston, and . Stillman, Principles and Concepts of DNA Replication in Bacteria, Archaea, and Eukarya, Cold Spring Harbor Perspectives in Biology, vol.5, issue.7, pp.1-13, 2013.

,

R. Ohbayashi, A. Nakamachi, T. S. Hatakeyama, S. Watanabe, Y. Kanesaki et al., Coordination of Polyploid Chromosome Replication with Cell Size and Growth in a Cyanobacterium, MBio, vol.10, issue.2, pp.1-15, 2019.

R. Ortenberg, O. Rozenblatt-rosen, and M. Mevarech, The Extremely Halophilic Archaeon Haloferax Volcanii Has Two Very Different Dihydrofolate Reductases, Molecular Microbiology, vol.35, issue.6, pp.1493-1505, 2000.

,

P. Forterre, J. Filée, and H. Myllykallio, Origin and Evolution of DNA and DNA Replication Machineries, Madame Curie Bioscience Database. Landes Bio, vol.0, 2004.

P. A. Garcia, M. Gardner, M. A. Freitas, and M. R. Parthun, Isolation of Proteins on Nascent Chromatin and Characterization by Quantitative Mass Spectrometry, Methods in Molecular Biology, vol.1983, pp.237-53, 2019.

F. Pfeiffer, S. C. Schuster, A. Broicher, M. Falb, P. Palm et al., Evolution in the Laboratory: The Genome of Halobacterium Salinarum Strain R1 Compared to That of Strain NRC-1, Genomics, vol.91, issue.4, pp.335-381, 2008.

T. Pham, . Minh, Y. Kang-wei-tan, K. Sakumura, H. Okumura et al., A Single-Molecule Approach to DNA Replication in Escherichia Coli Cells Demonstrated That DNA Polymerase III Is a Major Determinant of Fork Speed, Molecular Microbiology, vol.90, issue.3, pp.584-96, 2013.

,

D. E. Rawlings and D. B. Johnson, The Microbiology of Biomining: Development and Optimization of Mineral-Oxidizing Microbial Consortia, Microbiology, vol.153, issue.2, pp.315-339, 2007.

,

K. Raymann, P. Forterre, C. Brochier-armanet, and S. Gribaldo, Global Phylogenomic Analysis Disentangles the Complex Evolutionary History of DNA Replication in Archaea, Genome Biology and Evolution, vol.6, issue.1, pp.192-212, 2014.
URL : https://hal.archives-ouvertes.fr/hal-00957432

C. J. Reuter and J. A. Maupin-furlow, Analysis of Proteasome-Dependent Proteolysis in Haloferax Volcanii Cells, Using Short-Lived Green Fluorescent Proteins, Applied and Environmental Microbiology, vol.70, issue.12, pp.7530-7568, 2004.

R. Reyes-lamothe, E. Nicolas, and D. J. Sherratt, Chromosome Replication and Segregation in Bacteria, Annual Review of Genetics, vol.46, issue.1, pp.121-164, 2012.

R. Reyes-lamothe, C. Possoz, O. Danilova, and D. J. Sherratt, Independent Positioning and Action of Escherichia Coli Replisomes in Live Cells, Cell, vol.133, issue.1, pp.90-102, 2008.

,

R. Reyes-lamothe, D. J. Sherratt, and M. Leake, Stoichiometry and Architecture of Active DNA Replication Machinery in Escherichia Coli, Science, vol.328, issue.5977, pp.498-501, 2010.

,

Y. Ro, C. B. Stainer, and . Van-niel, The Concept of a Bacterium, Archiv Für Mikrobiologie, vol.42, issue.1, pp.17-35, 1962.

N. P. Robinson and S. D. Bell, Extrachromosomal Element Capture and the Evolution of Multiple Replication Origins in Archaeal Chromosomes, Proceedings of the National Academy of Sciences, vol.104, issue.14, pp.5806-5817, 2007.

L. J. Rothschild and R. Mancinelli, Life in Extreme Environments (Nature).PDF, Nature, vol.409, issue.6823, pp.1092-1101, 2011.

C. Rouillon, G. Henneke, D. Flament, J. Querellou, and J. Paul-raffin, DNA Polymerase Switching on Homotrimeric PCNA at the Replication Fork of the Euryarchaea Pyrococcus Abyssi, Journal of Molecular Biology, vol.369, issue.2, pp.343-55, 2007.
URL : https://hal.archives-ouvertes.fr/hal-00617495

M. A. Ruggiero, P. Dennis, T. M. Gordon, N. Orrell, T. Bailly et al., A Higher Level Classification of All Living Organisms, PLoS ONE, vol.10, issue.4, pp.1-60, 2015.

M. J. Rust, M. Bates, and X. Zhuang, Sub-Diffraction-Limit Imaging by Stochastic Optical Reconstruction Microscopy (STORM), Nature Methods, vol.3, issue.10, pp.793-95, 2006.

R. Y. Samson and S. D. Bell, Mechanism of Archaeal MCM Helicase Recruitment to DNA Replication Origins, Molecular Cell, vol.61, issue.2, pp.287-96, 2016.

R. Y. Samson, T. Obita, S. M. Freund, R. L. Williams, and S. D. Bell, A Role for the ESCRT System in Cell Division in Archaea, Science, vol.322, issue.5908, pp.1710-1723, 2008.

R. Y. Samson, Y. Xu, C. Gadelha, T. A. Stone, J. N. Faqiri et al., Specificity and Function of Archaeal DNA Replication Initiator Proteins, Cell Reports, vol.3, issue.2, pp.485-96, 2013.

A. Skowyra and S. A. Macneill, Identification of Essential and Non-Essential Single-Stranded DNA-Binding Proteins in a Model Archaeal Organism, Nucleic Acids Research, vol.40, issue.3, pp.1077-90, 2012.

,

A. Spang, J. H. Saw, K. Steffen-l-jørgensen, J. Zaremba-niedzwiedzka, A. E. Martijn et al., Europe PMC Funders Group Complex Archaea That Bridge the Gap between Prokaryotes and Eukaryotes, Nature, vol.521, issue.7551, pp.173-79, 2015.

A. Stachler, . Edda, S. Thandi, S. Schwarz, A. Schreiber et al., CRISPRi as an Efficient Tool for Gene Repression in Archaea, Methods, pp.0-1, 2019.

N. E. Stork, Re-Assessing Current Extinction Rates, Biodiversity and Conservation, vol.19, issue.2, pp.357-71, 2010.

K. Sullivan, S. A. Francis, and . Kay, Green Fluorescent Proteins, 1999.

S. Suzuki and N. Kurosawa, Robust Growth of Archaeal Cells Lacking a Canonical Single-Stranded DNA-Binding Protein, 2006.

T. H. Dickey1, S. E. Altschuler1, and D. S. Wuttke1, Single-Stranded DNA-Binding Proteins: Multiple Domains for Multiple Functions, Bone, vol.23, issue.1, pp.1-7, 2008.

R. Y. Tsien, The Green Fluorescent Protein, Annual Review of Biochemistry, vol.67, pp.509-553, 1998.

S. Tuduri, H. Tourrière, and P. Pasero, Defining Replication Origin Efficiency Using DNA Fiber Assays, Chromosome Research, vol.18, issue.1, pp.91-102, 2010.
URL : https://hal.archives-ouvertes.fr/hal-00463217

J. A. Winter and K. A. Bunting, Rings in the Extreme: PCNA Interactions and Adaptations in the Archaea, Archaea, vol.2012, pp.1-8, 2012.

J. A. Winter, P. Christofi, S. Morroll, and K. A. Bunting, The Crystal Structure of Haloferax Volcanii Proliferating Cell Nuclear Antigen Reveals Unique Surface Charge Characteristics Due to Halophilic Adaptation, BMC Structural Biology, vol.9, pp.1-15, 2009.

C. R. Woese and G. E. Fox, Phylogenetic Structure of the Prokaryotic Domain: The Primary Kingdoms, Proceedings of the National Academy of Sciences, vol.74, issue.11, pp.5088-90, 1977.

C. Woese, M. Kandler, and . Wheelis, Towards a Natural System of Organisms: Proposal for the Domains Archaea, Bacteria, and Eucarya, Proceedings of the National Academy of Sciences of the United States of America, vol.87, issue.12, pp.4576-79, 1990.

W. G. Woods and M. L. Dyall-smith, Construction and Analysis of a Recombination-Deficient (RadA) Mutant of Haloferax Volcanii, Molecular Microbiology, vol.23, issue.4, pp.791-97, 1997.

Z. Wu, H. Liu, J. Liu, X. Liu, and H. Xiang, Diversity and Evolution of Multiple Orc/Cdc6-Adjacent Replication Origins in Haloarchaea, BMC Genomics, vol.13, issue.1, 2012.

Z. Wu, J. Liu, H. Yang, H. Liu, and H. Xiang, Multiple Replication Origins with Diverse Control Mechanisms in Haloarcula Hispanica, Nucleic Acids Research, vol.42, issue.4, pp.2282-94, 2014.

,

H. Yang, Z. Wu, J. Liu, X. Liu, L. Wang et al., Activation of a Dormant Replication Origin Is Essential for Haloferax Mediterranei Lacking the Primary Origins, Nature Communications, vol.6, pp.1-11, 2015.

N. Y. Yao and M. E. O'donnell, Evolution of Replication Machines, Critical Reviews in Biochemistry and Molecular Biology, vol.51, issue.3, pp.135-184, 2016.

N. Yutin and E. V. Koonin, Archaeal Origin of Tubulin, Biology Direct, vol.7, issue.1, p.10, 2012.

K. M. Zatopek, F. Andrew, Z. Gardner, and . Kelman, Archaeal DNA Replication and Repair: New Genetic, Biophysical and Molecular Tools for Discovering and Characterizing Enzymes, Pathways and Mechanisms, FEMS Microbiology Reviews, vol.42, issue.4, pp.477-88, 2018.

E. Zuckerkandl and L. Pauling, Molecules as Documents of History, Journal of Theoretical Biology, vol.8, pp.357-66, 1965.