, Reductase Candidates of the Fatty Acid Elongase, Plant Physiol, vol.150, pp.1174-1191
Annual Plant Reviews, 2009. ,
The peri-cell-cycle in Arabidopsis, J. Exp. Bot, vol.52, pp.403-411, 2001. ,
, Pericycle. Curr. Biol, vol.24, pp.378-379, 2014.
Pasticcino2 is a protein tyrosine phosphatase-like involved in cell proliferation and differentiation in Arabidopsis, Plant J, vol.32, pp.713-722, 2002. ,
Adventitious Roots and Lateral Roots: Similarities and Differences, Annu. Rev. Plant Biol, vol.65, pp.639-666, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-01204095
The Transcription Factors BEL1 and SPL Are Required for Cytokinin and Auxin Signaling During Ovule Development in Arabidopsis, Plant Cell, vol.24, pp.2886-2897, 2012. ,
Symplastic intercellular transport from a developmental perspective, J. Exp. Bot, vol.65, pp.1857-1863, 2014. ,
Symplastic Intercellular Connectivity Regulates Lateral Root Patterning, Dev. Cell, vol.26, pp.136-147, 2013. ,
Local, Efflux-Dependent Auxin Gradients as a Common Module for Plant Organ Formation, Cell, vol.115, pp.591-602, 2003. ,
Auxin-Dependent Cell Cycle Reactivation through Transcriptional Regulation of Arabidopsis E2Fa by Lateral Organ Boundary Proteins, Plant Cell, vol.23, pp.3671-3683, 2011. ,
Spatiotemporal Regulation of Lateral Root Organogenesis in Arabidopsis by Cytokinin, Plant Cell, vol.24, pp.3967-3981, 2012. ,
How many ways are there to make a root?, Curr. Opin. Plant Biol, vol.34, pp.61-67, 2016. ,
A mutually inhibitory interaction between auxin and cytokinin specifies vascular pattern in roots, Curr. Biol, vol.21, pp.917-926, 2011. ,
Phloem-transported cytokinin regulates polar auxin transport and maintains vascular pattern in the root meristem, Curr. Biol, vol.21, pp.927-932, 2011. ,
Substrate specificity of Arabidopsis 3-ketoacylCoA synthases, Biochem. Biophys. Res. Commun, vol.346, pp.583-590, 2006. ,
The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots, Nature, vol.433, pp.39-44, 2005. ,
,
Gene expression programs during shoot, root, and callus development in Arabidopsis tissue culture, Plant Physiol, vol.141, pp.620-657, 2006. ,
Regulatory networks controlling the development of the root system and the formation of lateral roots: a comparative analysis of the roles of pericycle and vascular cambium, Ann. Bot, pp.1-14, 2018. ,
Push-pull strategy in the regulation of postembryonic root development, Curr. Opin. Plant Biol, vol.35, pp.158-164, 2017. ,
Floral dip: A simplified method for Agrobacteriummediated transformation of Arabidopsis thaliana, Plant J, vol.16, pp.735-743, 1998. ,
An evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants, vol.316, pp.421-425, 2007. ,
URL : https://hal.archives-ouvertes.fr/hal-00412589
Arabidopsis ? Aurora Kinases Function in Formative Cell Division Plane Orientation, Plant Cell, vol.23, pp.4013-4024, 2011. ,
Transcriptomic and Proteomic Analyses of Pericycle Cells of the Maize Primary Root, Plant Physiol, vol.145, pp.575-588, 2007. ,
BRS1 function in facilitating lateral root emergence in arabidopsis, Int. J. Mol. Sci, vol.18, pp.1-11, 2017. ,
Variations on a theme: Polycomb group proteins in plants, J. Exp. Bot, vol.65, pp.2769-2784, 2014. ,
Arabidopsis ALF4 encodes a nuclear-localized protein required for lateral root formation, Plant J, vol.37, pp.340-353, 2004. ,
Mechanical induction of lateral root initiation in Arabidopsis thaliana, Proc. Natl. Acad. Sci, vol.105, pp.18818-18823, 2008. ,
Root development: quiescent center not so mute after all, Curr. Biol, vol.8, pp.42-44, 1998. ,
Cellular organisation of the Arabidopsis thaliana root, Development, vol.119, pp.71-84, 1993. ,
Root system architecture: opportunities and constraints for genetic improvement of crops, Trends Plant Sci, vol.12, pp.474-481, 2007. ,
Lateral root formation and the multiple roles of auxin, J. Exp. Bot, 2017. ,
PLETHORA transcription factors orchestrate de novo organ patterning during Arabidopsis lateral root outgrowth, Proc. Natl. Acad. Sci, vol.114, 2017. ,
Pericycle Cell Proliferation and Lateral Root Initiation in Arabidopsis, Plant Physiol, vol.124, pp.1648-1657, 2000. ,
Quantitative Analysis of Lateral Root Development: Pitfalls and How to Avoid Them, Plant Cell, vol.24, pp.4-14, 2012. ,
Lateral root initiation in Arabidopsis: Developmental window, spatial patterning, density and predictability, Ann. Bot, vol.97, pp.903-915, 2006. ,
Early primordium morphogenesis during lateral root initiation in Arabidopsis thaliana, Planta, vol.214, pp.30-36, 2001. ,
Auxin acts as a local morphogenetic trigger to specify lateral root founder cells, Proc. Natl. Acad. Sci, vol.105, pp.8790-8794, 2008. ,
, Parsimonious Model of Vascular Patterning Links Transverse Hormone Fluxes to Lateral Root Initiation: Auxin Leads the Way, while Cytokinin Levels Out, vol.11, pp.1-40, 2015.
Radial Patterning of Arabidopsis Shoots by Class III HD-ZIP and KANADI Genes, Curr. Biol, vol.13, pp.1768-1774, 2003. ,
LATERAL ORGAN BOUNDARIES DOMAIN transcription factors direct callus formation in Arabidopsis regeneration, Cell Res, vol.22, pp.1169-1180, 2012. ,
The PASTICCINO genes of Arabidopsis thaliana are involved in the control of cell division and differentiation, Development, vol.125, pp.909-918, 1998. ,
LBD29 regulates the cell cycle progression in response to auxin during lateral root formation in Arabidopsis thaliana, Ann. Bot, vol.110, pp.1-10, 2012. ,
Control of Arabidopsis lateral root primordium boundaries by MYB36, New Phytol, vol.213, pp.105-112, 2017. ,
Transcriptional and Functional Classification of the GOLVEN/ROOT GROWTH FACTOR/CLE-Like Signaling Peptides Reveals Their Role in Lateral Root and Hair Formation, Plant Physiol, vol.161, pp.954-970, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-01190620
The GLV6/RGF8/CLEL2 peptide regulates early pericycle divisions during lateral root initiation, J. Exp. Bot, vol.66, pp.5245-5256, 2015. ,
Alterations in CER6, a gene identical to CUT1, differentially affect long-chain lipid content on the surface of pollen and stems, Plant Cell, vol.12, pp.2001-2009, 2000. ,
Uncovering the networks involved in stem cell maintenance and asymmetric cell division in the Arabidopsis root, Curr. Opin. Plant Biol, vol.29, pp.38-43, 2016. ,
Efflux-dependent auxin gradients establish the apical-basal axis of Arabidopsis, Nature, vol.426, pp.147-153, 2003. ,
Lateral root formation is blocked by a gain-of-function mutation in the solitary-root/IAA14 gene of Arabidopsis, Plant J, vol.29, pp.153-168, 2002. ,
PICKLE is required for SOLITARY-ROOT/IAA14-mediated repression of ARF7 and ARF19 activity during Arabidopsis lateral root initiation, Plant J, vol.48, pp.380-389, 2006. ,
Hormonal input in plant meristems: A balancing act, Semin. Cell Dev. Biol, vol.20, pp.1149-1156, 2009. ,
PLETHORA proteins as dose-dependent master regulators of Arabidopsis root development, Nature, vol.449, pp.1053-1057, 2007. ,
Casparian strips, Curr. Biol, vol.23, pp.1025-1026, 2013. ,
The Endodermis, Annu. Rev. Plant Biol, vol.64, pp.531-558, 2013. ,
The Arabidopsis GNOM ARF-GEF mediates endosomal recycling, auxin transport, and auxin-dependent plant growth, Cell, vol.112, pp.219-249, 2003. ,
URL : https://hal.archives-ouvertes.fr/hal-00134323
Selective protein degradation: A rheostat to modulate cell-cycle phase transitions, J. Exp. Bot, vol.65, pp.2603-2615, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-01048701
Food Security: The Challenge of Feeding 9 Billion People, Science, vol.327, pp.812-818, 2010. ,
The establishment of asymmetry in Arabidopsis lateral root founder cells is regulated by LBD16/ASL18 and related LBD/ASL proteins, Development, vol.139, pp.883-893, 2012. ,
Multiple AUX/IAA-ARF modules regulate lateral root formation: The role of Arabidopsis SHY2/IAA3-mediated auxin signalling, Philos. Trans. R. Soc. B Biol. Sci, vol.367, pp.1461-1468, 2012. ,
Quiescent center initiation in the Arabidopsis lateral root primordia is dependent on the SCARECROW transcription factor, Development, vol.143, pp.3363-3371, 2016. ,
The HIC signalling pathway links CO2 perception to stomatal development, Nature, vol.408, pp.713-716, 2000. ,
Positional information and reaction-diffusion: two big ideas in developmental biology combine, Development, vol.142, pp.1203-1211, 2015. ,
A Histone H3 Lysine-27 Methyltransferase Complex Represses Lateral Root Formation in Arabidopsis thaliana, Mol. Plant, vol.7, pp.977-988, 2014. ,
Formative and proliferative cell divisions, cell differentiation, and developmental changes in the meristem of Azolla roots, Planta, vol.143, pp.121-144, 1978. ,
Auxin Controls Arabidopsis Adventitious Root Initiation by Regulating Jasmonic Acid Homeostasis, Plant Cell, vol.24, pp.2515-2527, 2012. ,
URL : https://hal.archives-ouvertes.fr/hal-01004178
Early development and gravitropic response of lateral roots in Arabidopsis thaliana, Philos. Trans. R. Soc. B Biol. Sci, vol.367, pp.1509-1516, 2012. ,
The Arabidopsis gene PEPINO/PASTICCINO2 is required for proliferation control of meristematic and nonmeristematic cells and encodes a putative anti-phosphatase, Dev. Genes Evol, vol.212, pp.542-550, 2002. ,
Expression dynamics of WOX genes mark cell fate decisions during early embryonic patterning in Arabidopsis thaliana, Development, vol.131, pp.657-68, 2004. ,
Can changes in canopy and/or root system architecture explain historical maize yield trends in the, Crop Sci, vol.49, pp.299-312, 2009. ,
Hormonal control of cell proliferation requires PASTICCINO genes, Plant Physiol, vol.132, pp.1217-1227, 2003. ,
Extending The Story Of Very-Long-Chain Fatty Acid Elongation, Plant Sci, vol.210, pp.93-107, 2013. ,
Arabidopsis ketoacyl-CoA synthase 16 (KCS16) forms C36/C38acyl precursors for leaf trichome and pavement surface wax, Plant Cell Environ, vol.40, pp.1761-1776, 2017. ,
Auxin-Mediated Cell Cycle Activation during Early Lateral Root Initiation, PLANT CELL ONLINE, vol.14, pp.2339-2351, 2002. ,
Transcript profiling of early lateral root initiation, Proc Natl Acad Sci U S A, vol.101, pp.5146-5151, 2004. ,
The Auxin-Regulated AP2/EREBP Gene PUCHI Is Required for Morphogenesis in the Early Lateral Root Primordium of Arabidopsis, Plant Cell Online, vol.19, pp.2156-2168, 2007. ,
PICKLE is a CHD subfamily II ATPdependent chromatin remodeling factor, Biochim. Biophys. Acta -Gene Regul. Mech, vol.1829, pp.199-210, 2013. ,
Phyllotaxis and rhizotaxis in Arabidopsis are modified by three plethora transcription factors, Curr. Biol, vol.23, pp.956-962, 2013. ,
Building a plant: cell fate specification in the early Arabidopsis embryo, Development, vol.142, pp.420-430, 2015. ,
SCHIZORIZA Encodes a Nuclear Factor Regulating Asymmetry of Stem Cell Divisions in the Arabidopsis Root, Curr. Biol, vol.20, pp.452-457, 2010. ,
Divergent regeneration-competent cells adopt a common mechanism for callus initiation in angiosperms, Regeneration, vol.4, pp.132-139, 2017. ,
A group of receptor kinases are essential for CLAVATA signalling to maintain stem cell homeostasis, Nat. Plants, vol.4, pp.205-211, 2018. ,
Transcription Factors WOX11/12 Directly Activate WOX5/7 to Promote Root Primordia Initiation and Organogenesis, Plant Physiol, vol.172, pp.2363-2373, 2016. ,
Response to Comments on " 'Stemness': Transcriptional Profiling of Embryonic and Adult Stem Cells" and "A Stem Cell Molecular Signature, Science (80-. ), vol.302, pp.393-393, 2003. ,
Arabidopsis CDKA;1, a cdc2 homologue, controls proliferation of generative cells in male gametogenesis, Plant J, vol.45, pp.819-831, 2006. ,
Inducible System for Lateral Roots in Arabidopsis thaliana and Maize, Plant Organogenesis: Methods and Protocols, I. De Smet, pp.149-158, 2013. ,
Phloem-associated auxin response maxima determine radial positioning of lateral roots in maize, Philos. Trans. R. Soc. B Biol. Sci, vol.367, pp.1525-1533, 2012. ,
CYTOKININ RESPONSE FACTOR2 ( CRF2 ) and CRF3 Regulate Lateral Root Development in Response to Cold Stress in Arabidopsis, Plant Cell, vol.28, pp.1828-1843, 2016. ,
The Intrinsically Disordered Protein BKI1 Is Essential for Inhibiting BRI1 Signaling in Plants, Mol. Plant, vol.8, pp.1675-1678, 2015. ,
PlantTFDB 4.0: Toward a central hub for transcription factors and regulatory interactions in plants, Nucleic Acids Res, vol.45, pp.1040-1045, 2017. ,
The VLCFA elongase gene family in Arabidopsis thaliana: Phylogenetic analysis, 3D modelling and expression profiling, Plant Mol. Biol, vol.67, pp.547-566, 2008. ,
The AP2/EREBP gene PUCHI co-acts with LBD16/ASL18 and LBD18/ASL20 downstream of ARF7 and ARF19 to regulate lateral root development in arabidopsis, Plant Cell Physiol, vol.54, pp.1326-1334, 2013. ,
Arabidopsis MAKR5 is a positive effector of BAM3-dependent CLE45 signaling, EMBO Rep, vol.17, pp.1145-1154, 2016. ,
, , 2015.
, PLETHORA genes control regeneration by a two-step mechanism, Curr. Biol, vol.25, pp.1017-1030
A Role for Arabidopsis PUCHI in Floral Meristem Identity and Bract Suppression, Plant Cell Online, vol.21, pp.1360-1372, 2009. ,
KANADI regulates organ polarity in Arabidopsis, Nature, vol.411, pp.706-709, 2001. ,
Arabidopsis 3-Ketoacyl-Coenzyme A Synthase9 Is Involved in the Synthesis of Tetracosanoic Acids as Precursors of Cuticular Waxes, Suberins, Sphingolipids, and Phospholipids, Plant Physiol, vol.162, pp.567-580, 2013. ,
Control of the plant cell cycle by developmental and environmental cues, Plant Cell Physiol, vol.53, pp.953-964, 2012. ,
The development of Arabidopsis as a model plant, Plant J, vol.61, pp.909-921, 2010. ,
AtMYB41 activates ectopic suberin synthesis and assembly in multiple plant species and cell types, Plant J, vol.80, pp.216-229, 2014. ,
Regulation of Root Elongation by Histone Acetylation in Arabidopsis, J. Mol. Biol, vol.385, pp.45-50, 2009. ,
The auxin response factor MONOPTEROS controls meristem function and organogenesis in both the shoot and root through the direct regulation of PIN genes, New Phytol, vol.212, pp.42-50, 2016. ,
CLE peptide signaling in plants -the power of moving around, Physiol. Plant, vol.155, pp.74-87, 2015. ,
Root phenotyping: From component trait in the lab to breeding, J. Exp. Bot, vol.66, pp.5389-5401, 2015. ,
Functional divergence within the APETALA3/PISTILLATA floral homeotic gene lineages, Proc. Natl. Acad. Sci, vol.100, pp.6558-6563, 2003. ,
Cytokinins Act Directly on Lateral Root Founder Cells to Inhibit Root Initiation, Plant Cell Online, vol.19, pp.3889-3900, 2007. ,
GAL4-GFP enhancer trap lines for genetic manipulation of lateral root development in Arabidopsis thaliana, J. Exp. Bot, vol.56, pp.2433-2442, 2005. ,
Root system architecture from coupling cell shape to auxin transport, PLoS Biol, vol.6, pp.2721-2735, 2008. ,
Periodic Lateral Root Priming: What Makes It Tick?, Plant Cell, vol.29, pp.432-444, 2017. ,
Formation of lateral root meristems is a two-stage process, Development, vol.121, pp.3303-3313, 1995. ,
Auxin triggers a genetic switch, Nat. Cell Biol, vol.13, pp.611-615, 2011. ,
The stem cell concept in plants: A matter of debate, Cell, vol.113, pp.281-283, 2003. ,
Inference of the Arabidopsis Lateral Root Gene Regulatory Network Suggests a Bifurcation Mechanism That Defines Primordia Flanking and Central Zones, Plant Cell, vol.27, pp.1368-1388, 2015. ,
Lateral root development in Arabidopsis: Fifty shades of auxin, Trends Plant Sci, vol.18, pp.1360-1385, 2013. ,
The Dicot Root as a Model System for Studying Organogenesis, Plant Organogenesis: Methods and Potocols, pp.235-245, 2013. ,
3D analysis of mitosis distribution highlights the longitudinal zonation and diarch symmetry in proliferation activity of the Arabidopsis thaliana root meristem, Plant J, vol.92, pp.834-845, 2017. ,
EXPANSINA17 Up-Regulated by LBD18/ASL20 promotes lateral root formation during the auxin response, Plant Cell Physiol, vol.54, pp.1600-1611, 2013. ,
LBD18/ASL20 Regulates Lateral Root Formation in Combination with LBD16/ASL18 Downstream of ARF7 and ARF19 in Arabidopsis, Plant Physiol, vol.151, pp.1377-1389, 2009. ,
Arabidopsis ATXR2 deposits H3K36me3 at the promoters of LBD genes to facilitate cellular dedifferentiation, Sci. Signal, vol.10, pp.1-11, 2017. ,
ATXR2 as a core regulator of de novo root organogenesis, Plant Signal. Behav, vol.13, 2018. ,
JMJ30-mediated demethylation of H3K9me3 drives tissue identity changes to promote callus formation in Arabidopsis, Plant J, vol.95, pp.961-975, 2018. ,
WEREWOLF, a MYB-related protein in Arabidopsis, is a position-dependent regulator of epidermal cell patterning, Cell, vol.99, pp.473-83, 1999. ,
Two Arabidopsis 3-ketoacyl CoA synthase genes, KCS20 and KCS2/DAISY, are functionally redundant in cuticular wax and root suberin biosynthesis, but differentially controlled by osmotic stress, Plant J, vol.60, pp.462-475, 2009. ,
Hormonal regulation of stem cell maintenance in roots, J. Exp. Bot, vol.64, pp.1153-1165, 2013. ,
Acyl-Lipid Metabolism, Arab. B, vol.11, p.161, 2013. ,
Role of LOTR1 in Nutrient Transport through Organization of Spatial Distribution of Root Endodermal Barriers, Curr. Biol, vol.27, pp.758-765, 2017. ,
Plant aquaporins: Roles in plant physiology, Biochim. Biophys. Acta -Gen. Subj, vol.1840, pp.1574-1582, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-00962141
MYB36 regulates the transition from proliferation to differentiation in the Arabidopsis root, Proc. Natl. Acad. Sci. U. S. A, vol.112, pp.12099-104, 2015. ,
The WOX11 -LBD16 Pathway Promotes Pluripotency Acquisition in Callus Cells during de Novo Shoot Regeneration in Tissue Culture, Plant Cell Physiol, vol.59, pp.734-743, 2018. ,
WOX11 and 12 Are Involved in the First-Step Cell Fate Transition during de Novo Root Organogenesis in Arabidopsis, Plant Cell, vol.26, pp.1081-1093, 2014. ,
Sites and Regulation of Auxin Biosynthesis in Arabidopsis Roots, Plant Cell Online, vol.17, pp.1090-1104, 2005. ,
A Novel Image-Analysis Toolbox Enabling Quantitative Analysis of Root System Architecture, Plant Physiol, vol.157, pp.29-39, 2011. ,
Cell division plane orientation based on tensile stress in Arabidopsis thaliana, Proc. Natl. Acad. Sci, vol.113, pp.4294-4303, 2016. ,
Lateral root morphogenesis is dependent on the mechanical properties of the overlaying tissues, Proc. Natl. Acad. Sci, vol.110, pp.5229-5234, 2013. ,
URL : https://hal.archives-ouvertes.fr/cea-00848569
SHORT-ROOT Regulates Primary, Lateral, and Adventitious Root Development in Arabidopsis, Plant Physiol, vol.155, pp.384-398, 2011. ,
URL : https://hal.archives-ouvertes.fr/cea-00848574
An auxin transport-based model of root branching in Arabidopsis thaliana, PLoS One, vol.3, 2008. ,
URL : https://hal.archives-ouvertes.fr/hal-00831804
, , 2017.
, Predicting gene regulatory networks by combining spatial and temporal gene expression data in Arabidopsis root stem cells, Proc. Natl. Acad. Sci, vol.114, pp.7632-7640
An improved method for clearing and staining free-hand sections and whole-mount samples, Ann. Bot, vol.96, pp.989-996, 2005. ,
Root Architecture and Plant Productivity, Plant Physiol, vol.109, pp.7-13, 1995. ,
Steep, cheap and deep: An ideotype to optimize water and N acquisition by maize root systems, Ann. Bot, vol.112, pp.347-357, 2013. ,
TURNER REVIEW No. 14. Roots of the Second Green Revolution, Aust. J. Bot, vol.55, p.493, 2007. ,
BiNGO: A Cytoscape plugin to assess overrepresentation of Gene Ontology categories in Biological Networks, Bioinformatics, vol.21, pp.3448-3449, 2005. ,
Intrinsic and environmental response pathways that regulate root system architecture, Plant, Cell Environ, vol.28, pp.67-77, 2005. ,
Organization and cell differentiation in lateral roots of Arabidopsis thaliana, Development, vol.124, pp.33-44, 1997. ,
Auxin and Epigenetic Regulation of SKP2B, an F-Box That Represses Lateral Root Formation, Plant Physiol, vol.160, pp.749-762, 2012. ,
Targeted cell elimination reveals an auxin-guided biphasic mode of lateral root initiation, Genes Dev, vol.30, pp.471-483, 2016. ,
Auxin reflux between the endodermis and pericycle promotes lateral root initiation, EMBO J, vol.32, pp.149-158, 2013. ,
Secreted peptide signals required for maintenance of root stem cell niche in Arabidopsis. Science (80-. ), vol.329, pp.1065-1067, 2010. ,
Partial inhibition of Cdk1 in G2phase overrides the SAC and decouples mitotic events, Cell Cycle, vol.13, pp.1400-1412, 2014. ,
Role of PHABULOSA and PHAVOLUTA in determining radial patterning in shoots, Nature, vol.411, pp.709-713, 2001. ,
CUT1, an Arabidopsis Gene Required for Cuticular Wax Biosynthesis and Pollen Fertility, Encodes a Very-Long-Chain Fatty Acid Condensing Enzyme, Plant Cell Online, vol.11, pp.825-838, 1999. ,
Very-long-chain fatty acid biosynthesis is controlled through the expression and specificity of the condensing enzyme, Plant J, vol.12, pp.121-131, 1997. ,
Dynamic control of lateral root positioning, Curr. Opin. Plant Biol, vol.35, pp.1-7, 2017. ,
Oscillating gene expression determines competence for periodic Arabidopsis root branching. Science (80-. ), vol.329, pp.1306-1311, 2010. ,
Dual fatty acid elongase complex interactions in arabidopsis, PLoS One, vol.11, pp.1-20, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-01529206
Hormonal Regulation of Lateral Root Development in Arabidopsis Modulated by MIZ1 and Requirement of GNOM Activity for MIZ1 Function, Plant Physiol, vol.157, pp.1209-1220, 2011. ,
Shaping 3D Root System Architecture, Curr. Biol, vol.27, pp.919-930, 2017. ,
RALFL34 regulates formative cell divisions in Arabidopsis pericycle during lateral root initiation, J. Exp. Bot, vol.67, pp.4863-4875, 2016. ,
A role for auxin redistribution in the responses of the root system architecture to phosphate starvation in Arabidopsis, Plant Physiol, vol.138, pp.2061-2074, 2005. ,
URL : https://hal.archives-ouvertes.fr/hal-00086808
Intercellular movement of the putative transcription factor SHR in root patterning, Nature, vol.413, pp.307-311, 2001. ,
, , 2014.
, Arabidopsis homolog of trithorax1 (ATX1) is required for cell production, patterning, and morphogenesis in root development, J. Exp. Bot, vol.65, pp.6373-6384
Casparian strip diffusion barrier in Arabidopsis is made of a lignin polymer without suberin, Proc. Natl. Acad. Sci, vol.109, pp.10101-10106, 2012. ,
URL : https://hal.archives-ouvertes.fr/hal-01004175
Transcriptional profile of the Arabidopsis root quiescent center, Plant Cell, vol.17, pp.1908-1933, 2005. ,
, , 2009.
, The D-type cyclin CYCD4;1 modulates lateral root density in Arabidopsis by affecting the basal meristem region, Proc. Natl. Acad. Sci. U. S. A, vol.106, pp.22528-22533
Synthesis of Very-Long-Chain Fatty Acids in the Epidermis Controls Plant Organ Growth by Restricting Cell Proliferation, PLoS Biol, vol.11, p.1001531, 2013. ,
Intercellular Communication during Plant Development, Plant Cell, vol.23, pp.855-864, 2011. ,
To branch or not to branch: the role of pre-patterning in lateral root formation, Development, vol.140, pp.4301-4310, 2013. ,
Regulation of the Arabidopsis root vascular initial population by LONESOME HIGHWAY, Development, vol.134, pp.2959-2968, 2007. ,
An atypical bHLH transcription factor regulates early xylem development downstream of auxin, Plant Cell Physiol, vol.54, pp.398-405, 2013. ,
Auxinassociated initiation of vascular cell differentiation by LONESOME HIGHWAY, Development, vol.140, pp.765-774, 2013. ,
ARF7 and ARF19 Regulate Lateral Root Formation via Direct Activation of LBD/ASL Genes in Arabidopsis, PLANT CELL ONLINE, vol.19, pp.118-130, 2007. ,
Molecular Transducers from Roots Are Triggered in Arabidopsis Leaves by RootKnot Nematodes for Successful Feeding Site Formation: A Conserved Post-Embryogenic De novo, Organogenesis Program? Front. Plant Sci, vol.8, pp.1-14, 2017. ,
Symplastic communication between primary and developing lateral roots of Arabidopsis thaliana, J. Exp. Bot, vol.46, pp.187-197, 1995. ,
Hidden branches: developments in root system architecture, Annu. Rev. Plant Biol, vol.58, pp.93-113, 2007. ,
REVOLUTA regulates meristem initiation at lateral positions, Plant J, vol.25, pp.223-236, 2001. ,
Tissue and Organ Initiation in the Plant Embryo: A First Time for Everything, Annu. Rev. Cell Dev. Biol, vol.32, pp.47-75, 2016. ,
Diarch Symmetry of the Vascular Bundle in Arabidopsis Root Encompasses the Pericycle and Is Reflected in Distich Lateral Root Initiation, Plant Physiol, vol.146, pp.140-148, 2007. ,
Auxin regulates aquaporin function to facilitate lateral root emergence, Nat. Cell Biol, vol.14, pp.991-998, 2012. ,
Sequential induction of auxin efflux and influx carriers regulates lateral root emergence, Mol. Syst. Biol, vol.9, pp.1-15, 2013. ,
Post-embryonic organogenesis and plant regeneration from tissues: two sides of the same coin? Front, Plant Sci, vol.5, pp.1-11, 2014. ,
Growth and development of the root apical meristem, Curr. Opin. Plant Biol, vol.15, pp.17-23, 2012. ,
Auxin transport routes in plant development, Development, vol.136, pp.2675-2688, 2009. ,
Control of Arabidopsis Root Development, Annu. Rev. Plant Biol, vol.63, pp.563-590, 2012. ,
Organizer-Derived WOX5 Signal Maintains Root Columella Stem Cells through Chromatin-Mediated Repression of CDF4 Expression, Dev. Cell, vol.33, pp.576-588, 2015. ,
Lateral root emergence in Arabidopsis is dependent on transcription factor LBD29 regulation of auxin influx carrier LAX3, Development, vol.143, pp.3340-3349, 2016. ,
, , 2005.
, Class III homeodomain-leucine zipper gene family members have overlapping, antagonistic, and distinct roles in Arabidopsis development, Plant Cell, vol.17, pp.61-76
, , 2000.
, FIDDLEHEAD, a gene required to suppress epidermal cell interactions in Arabidopsis, encodes a putative lipid biosynthetic enzyme, Proc. Natl. Acad. Sci, vol.97, pp.1311-1316
Saturated Very-Long-Chain Fatty Acids Promote Cotton Fiber and Arabidopsis Cell Elongation by Activating Ethylene Biosynthesis, Plant Cell Online, vol.19, pp.3692-3704, 2007. ,
Water and solute permeabilities of Arabidopsis roots in relation to the amount and composition of aliphatic suberin, J. Exp. Bot, vol.62, pp.1961-1974, 2011. ,
Suberin research in the genomics eraNew interest for an old polymer, Plant Sci, vol.180, pp.339-413, 2011. ,
Basipetal Auxin Transport Is Required for Gravitropism in Roots of Arabidopsis, Plant Physiol, vol.122, pp.481-490, 2000. ,
Tonoplast aquaporins facilitate lateral root emergence, Plant Physiol, p.1635, 2015. ,
Cytokinin activation of Arabidopsis cell division through a D-type cyclin, Science, vol.283, pp.1541-1544, 1999. ,
, , 2016.
, J. Exp. Bot, vol.67, pp.4889-4899
Regulation of plant root system architecture: Implications for crop advancement, Curr. Opin. Biotechnol, vol.32, pp.93-98, 2015. ,
Direct conversion of root primordium into shoot meristem relies on timing of stem cell niche development, Development, vol.144, pp.1187-1200, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-01605725
Very-Long-Chain Fatty Acids Are Involved in Polar Auxin Transport and Developmental Patterning in Arabidopsis, Plant Cell, vol.22, pp.364-375, 2010. ,
URL : https://hal.archives-ouvertes.fr/hal-00856101
A novel Aux/IAA28 signaling cascade activates GATA23-dependent specification of lateral root founder cell identity, Curr. Biol, vol.20, pp.1697-1706, 2010. ,
SCARECROW is involved in positioning the stem cell niche in the Arabidopsis root meristem, Genes Dev, vol.17, pp.354-362, 2003. ,
The dynamic plant stem cell niches, Curr. Opin. Plant Biol, vol.10, pp.639-644, 2007. ,
The Arabidopsis D-Type Cyclin CYCD2;1 and the Inhibitor ICK2/KRP2, 2011. ,
, Modulate Auxin-Induced Lateral Root Formation. Plant Cell, vol.23, pp.641-660
Conserved factors regulate signalling in Arabidopsis thaliana shoot and root stem cell organizers, Nature, vol.446, pp.811-814, 2007. ,
When biochemistry meets mechanics: A systems view of growth control in plants, Curr. Opin. Plant Biol, vol.28, pp.137-143, 2015. ,
A steroid-inducible gene expression system for plant cells, Proc. Natl. Acad. Sci. U. S. A, vol.88, pp.10421-10425, 1991. ,
Stem-cell niches: Nursery rhymes across kingdoms, Nat. Rev. Mol. Cell Biol, vol.8, pp.345-354, 2007. ,
Coordination of growth in root and shoot apices by AIL/PLT transcription factors, Curr. Opin. Plant Biol, vol.41, pp.95-101, 2018. ,
Root patterning: It takes two to tangle, J. Exp. Bot, vol.67, pp.1201-1203, 2016. ,
Fiji: An open-source platform for biological-image analysis, Nat. Methods, vol.9, pp.676-682, 2012. ,
MONOPTEROS controls embryonic root initiation by regulating a mobile transcription factor, Nature, vol.464, pp.913-916, 2010. ,
Genome Regulation by Polycomb and Trithorax: 70 Years and Counting, Cell, vol.171, pp.34-57, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-01596016
Very-long-chain fatty acids restrict regeneration capacity by confining pericycle competence for callus formation in Arabidopsis, Proc. Natl. Acad. Sci, vol.113, pp.5101-5106, 2016. ,
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks, Genome Res, vol.13, pp.2498-2504, 2003. ,
Noncanonical WOX11 -mediated root branching contributes to plasticity in Arabidopsis root system architecture, Development, vol.144, pp.3126-3133, 2017. ,
Noncanonical WOX11 -mediated root branching contributes to plasticity in Arabidopsis root system architecture, 2017. ,
SWP1 negatively regulates lateral root initiation and elongation in Arabidopsis, Plant Signal. Behav, vol.7, 2012. ,
Lateral root initiation: One step at a time, New Phytol, vol.193, pp.867-873, 2012. ,
Auxin-dependent regulation of lateral root positioning in the basal meristem of Arabidopsis, Development, vol.134, pp.681-690, 2007. ,
Bimodular auxin response controls organogenesis in Arabidopsis, Proc. Natl. Acad. Sci, vol.107, pp.2705-2710, 2010. ,
Receptor-Like Kinase ACR4 Restricts Formative Cell Divisions in the Arabidopsis Root. Science (80-. ), vol.322, pp.594-597, 2008. ,
Asymmetric cell division in land plants and algae: The driving force for differentiation, Nat. Rev. Mol. Cell Biol, vol.12, pp.177-188, 2011. ,
Lateral root initiation or the birth of a new meristem, Plant Mol. Biol, vol.60, pp.871-887, 2006. ,
LRP1, a gene expressed in lateral and adventitious root primordia of arabidopsis, Plant Cell, vol.7, pp.735-745, 1995. ,
Root system architecture: insights from Arabidopsis and cereal crops, Philos. Trans. R. Soc. B Biol. Sci, vol.367, pp.1441-1452, 2012. ,
Formative cell divisions: Principal determinants of plant morphogenesis, Plant Cell Physiol, vol.54, pp.333-342, 2013. ,
Postembryonic control of root meristem growth and development, Curr. Opin. Plant Biol, vol.17, pp.7-12, 2014. ,
Stem cells find their niche, Nature, vol.414, pp.98-104, 2001. ,
Moderation of arabidopsis root stemness by CLAVATA1 and ARABIDOPSIS CRINKLY4 receptor kinase complexes, Curr. Biol, vol.23, pp.362-371, 2013. ,
Plant stem cell niches, Int. J. Dev. Biol, vol.49, pp.479-489, 2005. ,
Breakout -lateral root emergence in Arabidopsis thaliana, Curr. Opin. Plant Biol, vol.41, pp.67-72, 2018. ,
Arabidopsis Regeneration from Multiple Tissues Occurs via a Root Development Pathway, Dev. Cell, vol.18, pp.463-471, 2010. ,
The auxin influx carrier LAX3 promotes lateral root emergence, Nat Cell Biol, vol.10, pp.946-954, 2008. ,
URL : https://hal.archives-ouvertes.fr/cea-00848585
Threat to future global food security from climate change and ozone air pollution, Nat. Clim. Chang, vol.4, pp.817-821, 2014. ,
FUSCA3 interacting with LEAFY COTYLEDON2 controls lateral root formation through regulating YUCCA4 gene expression in Arabidopsis thaliana, New Phytol, vol.213, pp.1740-1754, 2017. ,
Endogenous Arabidopsis messenger RNAs transported to distant tissues, Nat. Plants, vol.1, pp.1-8, 2015. ,
The key players of the primary root growth and development also function in lateral roots in Arabidopsis, Plant Cell Rep, vol.33, pp.745-753, 2014. ,
Shaping a root system: Regulating lateral versus primary root growth, Trends Plant Sci, vol.19, pp.426-431, 2014. ,
KCS1encodes a fatty acid elongase 3-ketoacyl-CoA synthase affecting wax biosynthesis inArabidopsis thaliana, Plant J, vol.17, pp.119-130, 1999. ,
Arabidopsis lonely guy (LOG) multiple mutants reveal a central role of the LOG-dependent pathway in cytokinin activation, Plant J, vol.69, pp.355-365, 2012. ,
Lateral Inhibition by a Peptide Hormone-Receptor Cascade during Arabidopsis Lateral Root Founder Cell Formation, Dev. Cell, pp.1-12, 2018. ,
Specific and differential inhibition of verylong-chain fatty acid elongases from Arabidopsis thaliana by different herbicides, Proc. Natl. Acad. Sci, vol.101, pp.11903-11908, 2004. ,
Inhibition of saturated very-long-chain fatty acid biosynthesis by mefluidide and perfluidone, selective inhibitors of 3-ketoacyl-CoA synthases, Phytochemistry, vol.76, pp.162-171, 2012. ,
Lateral Root Formation: Building a Meristem de novo, Annual Plant Reviews online, pp.1-44, 2018. ,
Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements, Plant Cell, vol.9, pp.1963-71, 1997. ,
Cell cycle progression in the pericycle is not sufficient for SOLITARY ROOT/IAA14-mediated lateral root initiation in Arabidopsis thaliana, Plant Cell, vol.17, pp.3035-50, 2005. ,
Hormonal Interactions in the Regulation of Plant Development, Annu. Rev. Cell Dev. Biol, vol.28, pp.463-487, 2012. ,
mapping vascular tissues onto the Arabidopsis root, Curr. Opin. Plant Biol, vol.41, pp.16-22, 2018. ,
A spatial accommodation by neighboring cells is required for organ initiation in arabidopsis, Science, vol.343, pp.178-183, 2014. ,
, , 2011.
Regulation of plant stem cell quiescence by a brassinosteroid signaling module, Dev. Cell, vol.30, pp.36-47, 2014. ,
Suberin: biosynthesis, regulation, and polymer assembly of a protective extracellular barrier, Plant Cell Rep, vol.34, pp.573-586, 2015. ,
The circadian clock rephases during lateral root organ initiation in Arabidopsis thaliana, Nat. Commun, vol.6, 2015. ,
Role of a positive regulator of root hair development, CAPRICE, in Arabidopsis root epidermal cell differentiation, Development, vol.129, pp.5409-5428, 2002. ,
ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology, Plant Cell, vol.29, 2017. ,
Morphogenetic Sphingolipids in Stem Cell Differentiation and Embryo Development, Lipidomics of Stem Cells, pp.11-40, 2017. ,
Cytokinin Signaling Activates WUSCHEL Expression during Axillary Meristem Initiation, Plant Cell, vol.29, 2016. ,
Brassinosteroids Regulate Dissociation of BKI1, a Negative Regulator of BRI1 Signaling, from the Plasma Membrane. Science (80-. ), vol.313, pp.1118-1122, 2006. ,
Rules and self-organizing properties of post-embryonic plant organ cell division patterns, Curr. Biol, vol.26, pp.439-449, 2016. ,
Plant Biology: Building Barriers? in Roots, Curr. Biol, vol.27, pp.172-174, 2017. ,
Enrichment of hydroxylated C24-and C26-acyl-chain sphingolipids mediates PIN2 apical sorting at trans-Golgi network subdomains, Nat. Commun, vol.7, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-01608825
Auxin triggers transient local signaling for cell specification in Arabidopsis embryogenesis, Dev. Cell, vol.10, pp.265-270, 2006. ,
Transcriptional Responses to the Auxin Hormone, Annu. Rev. Plant Biol, vol.67, pp.539-574, 2016. ,
The NAC Domain Transcription Factors FEZ and SOMBRERO Control the Orientation of Cell Division Plane in Arabidopsis Root Stem Cells, Dev. Cell, vol.15, pp.913-922, 2008. ,
An 202 "Electronic Fluorescent Pictograph" Browser for Exploring and Analyzing Large-Scale Biological Data Sets, PLoS One, vol.2, p.718, 2007. ,
Polar PIN localization directs auxin flow in plants, Science, vol.312, p.883, 2006. ,
KANADI1 regulates adaxial-abaxial polarity in Arabidopsis by directly repressing the transcription of ASYMMETRIC LEAVES2, Proc. Natl. Acad. Sci, vol.105, pp.16392-16397, 2008. ,
Adaptor proteins GIR1 and GIR2. I. Interaction with the repressor GLABRA2 and regulation of root hair development, Biochem. Biophys. Res. Commun, vol.488, pp.547-553, 2017. ,
Genome-Wide Identification of Arabidopsis LBD29 Target Genes Reveals the Molecular Events behind Auxin-Induced Cell Reprogramming during Callus Formation, Plant Cell Physiol, vol.59, pp.744-755, 2018. ,
Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration, Nat. Plants, vol.4, pp.108-115, 2018. ,
A molecular framework for plant regeneration, Science, vol.311, pp.385-388, 2006. ,
Cyclic programmed cell death stimulates hormone signaling and root development in Arabidopsis. Science (80-. ), vol.351, pp.384-387, 2016. ,
, Curr. Biol, vol.25, pp.1381-1388, 2015.
ABCG Transporters Are Required for Suberin and Pollen Wall Extracellular Barriers in Arabidopsis, Plant Cell, vol.26, pp.3569-3588, 2014. ,
Ethylene Biosynthesis Is Promoted by Very-Long-Chain Fatty Acids during Lysigenous Aerenchyma Formation in Rice Roots, Plant Physiol, vol.169, pp.180-193, 2015. ,
CLE peptides and their signaling pathways in plant development, J. Exp. Bot, vol.67, pp.4813-4826, 2016. ,
Genetic control of plant development by overriding a geometric division rule, Dev. Cell, vol.29, pp.75-87, 2014. ,
Auxin Control of Root Organogenesis from Callus in Tissue Culture, Front. Plant Sci, vol.8, pp.1-4, 2017. ,
Root type specific reprogramming of maize pericycle transcriptomes by local high nitrate results in disparate lateral root branching patterns, Plant Physiol, vol.170, p.1885, 2015. ,
Cell Type-Specific Gene Expression Analyses by RNA Sequencing Reveal Local High Nitrate-Triggered Lateral Root Initiation in Shoot-Borne Roots of Maize by Modulating Auxin-Related Cell Cycle Regulation, 2015. ,
PP2A-3 interacts with ACR4 and regulates formative cell division in the Arabidopsis root, Proc. Natl. Acad. Sci, vol.113, pp.1447-1452, 2016. ,
Cell-to-cell communication during lateral root development, Mol. Plant, vol.7, pp.758-760, 2014. ,
Reduced Lateral Root Branching Density Improves Drought Tolerance in Maize, Plant Physiol, vol.168, pp.1603-1615, 2015. ,
Cytokinin induces cell division in the quiescent center of the arabidopsis root apical meristem, Curr. Biol, vol.23, pp.1979-1989, 2013. ,
Auxin Biosynthesis and Its Role in Plant Development, Annu. Rev. Plant Biol, vol.61, pp.49-64, 2010. ,
Disruptions of the Arabidopsis Enoyl-CoA Reductase Gene Reveal an Essential Role for Very-Long-Chain Fatty Acid Synthesis in Cell Expansion during Plant Morphogenesis, Plant Cell Online, vol.17, pp.1467-1481, 2005. ,
The nature of stem cells: State rather than entity, Nat. Rev. Genet, vol.5, pp.873-878, 2004. ,
Transcriptional regulation and functional involvement of the Arabidopsis pescadillo ortholog AtPES in root development, Plant Sci, vol.229, pp.53-65, 2014. ,
A Robust and Sensitive Synthetic Sensor to Monitor the Transcriptional Output of the Cytokinin Signaling Network in Planta, Plant Physiol, vol.161, pp.1066-1075, 2013. ,
AT3G54010 PAS1 Yes Interact with other VLCFA enzymes to form the elongase complex, 2010. ,
Mutant: severely affected, reduced lateral root formation and growth, 2010. ,
, AT5G59770 PTPLA Yes PAS2-like function but in root vascular tissues. Required for VLCFA biosynthesis, 2016.
Lateral Root Formation: Building a Meristem de novo, Annual Plant Reviews online, pp.1-44, 2018. ,
,
, Congress Of The International Plant Molecular Biology (IPMB2108), pp.5-10, 2017.
, Vietnam 3 Laboratory of Plant Developmental Signaling, UMR "Diversite? Adaptation et Développement des plantes, 2012.
, , 2015.
, , p.9006065, 1997.
systems biology approach, we discovered that expression of very long chain fatty acid (VLCFA) biosynthesis genes is induced downstream of PUCHI, a transcription factor controlling cell division and morphogenesis during lateral root formation. We also show that the PUCHI-mediated regulation of VLCFA biosynthesis is also involved in root derived callus formation, the first step in in vitro plant regeneration. More experiments are on-going to corroborate the hypothesis such as VLCFA quantification in WT and puchi-1 roots, 2007. ,
, , 2015.
, , 2013.
, , 2016.