A. Hannemann, Mandadi and Scholthof, Sandoya and Buanafina, 1991.

;. Parniske and . Phongdara, Parasitic weed management by using strigolactone-degrading fungi, Pest Manag Sci, vol.72, pp.2043-2047, 1992.

J. Boddu, S. Cho, W. M. Kruger, and G. J. Muehlbauer, Transcriptome Analysis of the Barley-Fusarium graminearum Interaction, Mol Plant-Microbe Interact, vol.19, pp.407-417, 2006.

J. Boddu, S. Cho, and G. J. Muehlbauer, Transcriptome Analysis of Trichothecene-Induced Gene Expression in Barley, Mol Plant-Microbe Interact, vol.20, pp.1364-1375, 2007.

M. J. Boenisch and W. Schäfer, Fusarium graminearum forms mycotoxin producing infection structures on wheat, BMC Plant Biol, vol.11, p.110, 2011.

M. D. Bolton and D. F. Garvin, Wheat leaf rust caused by Puccinia triticina, Mol Plant Pathol, vol.9, pp.563-575, 2008.

G. P. Bolwell, K. Bozak, and A. Zimmerlin, Plant cytochrome p450, Phytochemistry, vol.37, pp.1491-1506, 1994.

J. Booker, M. Auldridge, S. Wills, D. Mccarty, H. Klee et al., MAX3/CCD7 Is a Carotenoid Cleavage Dioxygenase Required for the Synthesis of a Novel Plant Signaling Molecule, Curr Biol, vol.14, pp.1232-1238, 2004.

J. Booker, T. Sieberer, W. Wright, L. Williamson, B. Willett et al., MAX1 encodes a cytochrome P450 family member that acts downstream of MAX3/4 to produce a carotenoid-derived branchinhibiting hormone, Dev Cell, vol.8, pp.443-449, 2005.

S. Boutet-mercey, F. Perreau, A. Roux, G. Clavé, J. Pillot et al., Validated Method for Strigolactone Quantification by Ultra High-Performance Liquid Chromatography -Electrospray Ionisation Tandem Mass Spectrometry Using Novel Deuterium Labelled Standards, Phytochem Anal, 2017.

K. R. Bozak, D. P. O'keefe, and R. E. Christoffersen, Expression of a Ripening-Related Avocado (Persea americana) Cytochrome P450 in Yeast, Plant Physiol, vol.100, pp.1976-1981, 1992.

K. R. Bozak, H. Yu, R. Sirevåg, and R. E. Christoffersen, Sequence analysis of ripeningrelated cytochrome P-450 cDNAs from avocado fruit, Proc Natl Acad Sci U S A, vol.87, pp.3904-3908, 1990.

J. N. Bragg, J. Wu, S. P. Gordon, M. E. Guttman, R. Thilmony et al., Generation and Characterization of the Western Regional Research Center Brachypodium T-DNA Insertional Mutant Collection, PLoS One, 2012.

P. B. Brewer, R. Gui, M. G. Mason, and C. Beveridge, Strigolactone Inhibition of Branching Independent of Polar Auxin Transport, Plant Physiol, vol.168, pp.1820-1829, 2015.

P. B. Brewer, K. Yoneyama, F. Filardo, E. Meyers, A. Scaffidi et al., LATERAL BRANCHING OXIDOREDUCTASE acts in the final stages of strigolactone biosynthesis in Arabidopsis, Proc Natl Acad Sci, vol.113, pp.6301-6306, 2016.

. Brown, M. Urban, A. Van-de-meene, and K. E. Hammond-kosack, The infection biology of Fusarium graminearum: Defining the pathways of spikelet to spikelet colonisation in wheat ears, Fungal Biol, vol.114, pp.555-571, 2010.

T. P. Brutnell, J. L. Bennetzen, and J. P. Vogel, Brachypodium distachyon and Setaria viridis : Model Genetic Systems for the Grasses, Annu Rev Plant Biol, vol.66, pp.465-485, 2015.

H. Buerstmayr, T. Ban, and J. A. Anderson, QTL mapping and marker-assisted selection for Fusarium head blight resistance in wheat : a review, Plant Breed, vol.128, pp.1-26, 2009.

H. Buerstmayr, B. Steiner, L. Hartl, M. Griesser, N. Angerer et al., Molecular mapping of QTLs for Fusarium head blight resistance in spring wheat. II. Resistance to fungal penetration and spread, Theor Appl Genet, vol.107, pp.503-508, 2003.

F. Cabello-hurtado, Y. Batard, J. Salau, F. Durst, and F. Pinot, Cloning , Expression in Yeast, and Functional Characterization of CYP81B1, a Plant Cytochrome P450 That Catalyzes In-chain Hydroxylation of Fatty Acids, vol.273, pp.7260-7267, 1998.

C. Cardoso, C. Ruyter-spira, and H. J. Bouwmeester, Strigolactones and root infestation by plant-parasitic Striga, Orobanche and Phelipanche spp, Plant Sci, vol.180, pp.414-420, 2011.

C. Cardoso, Y. Zhang, M. Jamil, J. Hepworth, T. Charnikhova et al., Natural variation of rice strigolactone biosynthesis is associated with the deletion of two MAX1 orthologs, Proc Natl Acad Sci, vol.111, pp.2379-2384, 2014.

S. Chakraborty and N. A. , Climate change, plant diseases and food security: An overview, Plant Pathol, vol.60, pp.2-14, 2011.

R. J. Challis, J. Hepworth, C. Mouchel, R. Waites, and O. Leyser, A Role for MORE AXILLARY GROWTH1 (MAX1) in Evolutionary Diversity in Strigolactone Signaling Upstream of MAX2, Plant Physiol, vol.161, pp.1885-1902, 2013.

J. Coleman, M. Blake-kalff, and T. Davies, Detoxification of xenobiotics by plants: Chemical modification and vacuolar compartmentation, Trends Plant Sci, vol.2, pp.144-151, 1997.

C. E. Cook, L. P. Whichard, B. Turner, M. E. Wall, and G. H. Egley, Germination of Witchweed (Striga lutea Lour.): Isolation and Properties of a Potent Stimulant, Science (80-), vol.154, pp.1189-1190, 1966.

R. J. Cook, Take-all of wheat, Physiol Mol Plant Pathol, vol.62, pp.73-86, 2003.

C. Cowger, J. Patton-ozkurt, G. Brown-guedira, and L. Perugini, Post-anthesis moisture increased Fusarium head blight and deoxynivalenol levels in North Carolina winter wheat, Phytopathology, vol.99, pp.320-327, 2009.

S. Crawford, N. Shinohara, T. Sieberer, L. Williamson, G. George et al., Strigolactones enhance competition between shoot branches by dampening auxin transport, Development, vol.137, pp.2905-2913, 2010.

A. Crozier, I. B. Jaganath, and M. N. Clifford, Phenols, Polyphenols and Tannins: An Overview. Plant Second Metab Occur Struct Role Hum Diet, pp.1-24, 2007.

Y. Cui, M. Y. Lee, N. Huo, J. Bragg, L. Yan et al., Fine mapping of the Bsr1 barley stripe mosaic virus resistance gene in the model grass brachypodium distachyon, PLoS One, 2012.

B. C. Curtis, Wheat in the world, Food Agric Organ United Nations, pp.1-16, 2004.

A. Cuzick, M. Urban, and K. Hammond-kosack, Fusarium graminearum gene deletion mutants map1 and tri5 reveal similarities and differences in the pathogenicity requirements to cause disease on Arabidopsis and wheat floral tissue, New Phytol, vol.177, pp.990-1000, 2008.

O. Czarnecki, J. Yang, X. Wang, S. Wang, W. Muchero et al., Characterization of MORE AXILLARY GROWTH genes in populus, PLoS One, 2014.

M. Dalmais, S. Antelme, S. Ho-yue-kuang, Y. Wang, O. Darracq et al., A TILLING Platform for Functional Genomics in Brachypodium distachyon, PLoS One, 2013.
URL : https://hal.archives-ouvertes.fr/hal-01190604

D. Miller, J. Culley, J. Fraser, K. Hubbard, S. Meloche et al., Effect of tillage practice on fusarium head blight of wheat, Can J Plant Pathol, vol.20, pp.95-103, 1998.

R. Dean, . Van-kan-j-a.-l, K. E. Hammond-kosack, D. Pietro, A. Spanu et al., The Top 10 fungal pathogens in molecular plant pathology, Mol Plant Pathol, vol.13, pp.414-430, 2012.

E. L. Decker, A. Alder, S. Hunn, J. Ferguson, M. T. Lehtonen et al., Strigolactone biosynthesis is evolutionarily conserved, regulated by phosphate starvation and contributes to resistance against phytopathogenic fungi in a moss, New Phytol, 2017.

A. E. Desjardins, T. M. Hohn, and S. P. Mccormick, Trichothecene biosynthesis in Fusarium species: chemistry, genetics, and significance, Microbiol Rev, vol.57, pp.595-604, 1993.

O. J. Desmond, J. M. Manners, A. E. Stephens, D. J. Maclean, P. M. Schenk et al., The Fusarium mycotoxin deoxynivalenol elicits hydrogen peroxide production, programmed cell death and defence responses in wheat, Mol Plant Pathol, vol.9, pp.435-445, 2008.

M. Diamond, T. J. Reape, O. Rocha, S. M. Doyle, J. Kacprzyk et al., The Fusarium Mycotoxin Deoxynivalenol Can Inhibit Plant Apoptosis-Like Programmed Cell Death, PLoS One, 2013.

L. Didierjean, L. Gondet, R. Perkins, S. Lau, H. Schaller et al., Engineering Herbicide Metabolism in Tobacco and Arabidopsis with CYP76B1, a Cytochrome P450 Enzyme from Jerusalem Artichoke, Plant Physiol, vol.130, pp.179-189, 2002.

R. Dill-macky and R. K. Jones, The Effect of Previous Crop Residues and Tillage on Fusarium Head Blight of Wheat, Plant Dis, vol.84, pp.71-76, 2000.

D. R. Dohn and R. I. Krieger, N-demethylation of p-chloro-N-methylaniline catalyzed by subcellular fractions from the avocado pear (Persea americana), Arch Biochem Biophys, vol.231, pp.416-423, 1984.

E. Dor, D. M. Joel, Y. Kapulnik, H. Koltai, and J. Hershenhorn, The synthetic strigolactone GR24 influences the growth pattern of phytopathogenic fungi, Planta, vol.234, pp.419-427, 2011.

J. Draper, L. Mur, .. J. Jenkins, G. Ghosh-biswas, G. C. Bablak et al., Brachypodium distachyon. A New Model System for Functional Genomics in Grasses1, Plant Physiol, vol.127, pp.1539-1555, 2001.

R. Drummond, H. Sheehan, J. L. Simons, N. M. Martinez-sanchez, R. M. Turner et al., The expression of petunia strigolactone pathway genes is altered as part of the endogenous developmental program, Front Plant Sci, vol.2, pp.1-14, 2012.

R. Drummond, N. M. Martinez-sanchez, B. J. Janssen, K. R. Templeton, J. L. Simons et al., Petunia hybrida CAROTENOID CLEAVAGE DIOXYGENASE7 Is Involved in the Production of Negative and Positive Branching Signals in Petunia, Plant Physiol, vol.151, pp.1867-1877, 2009.

J. Dubcovsky and J. Dvorak, Genome Plasticity a Key Factor in the Success of Polyploid Wheat Under Domestication, Science (80-), vol.316, pp.1862-1866, 2007.

R. Edwards, D. P. Dixon, I. Cummins, M. Brazier-hicks, and M. Skipsey, New Perspectives on the Metabolism and Detoxification of Synthetic Compounds in Plants, Org. Xenobiotics Plants From Mode Action to Ecophysiol, pp.125-148, 2011.

, ENDURE, 2018.

A. Enghiad, D. Ufer, A. M. Countryman, and D. D. Thilmany, An Overview of Global Wheat Market Fundamentals in an Era of Climate Concerns, Int J Agron, 2017.

, European Commission, 2006.

C. Falter and C. A. Voigt, Comparative Cellular Analysis of Pathogenic Fungi with a Disease Incidence in Brachypodium distachyon and Miscanthus x giganteus, Bioenergy Res, vol.7, pp.958-973, 2014.

, FAO (2018) Food and Agricultural Organization of the United Nations -Statistics

, Chemical Contaminants, Metals, Natural Toxins & Pesticides Guidance Documents & Regulations, 2010.

M. Feldman, Origin of cultivated wheat, World Wheat B. A Hist. Wheat Breed, pp.3-56, 2001.

M. Feldman, , pp.185-192, 1995.

T. L. Fitzgerald, J. J. Powell, K. Schneebeli, M. M. Hsia, D. M. Gardiner et al., Brachypodium as an emerging model for cereal-pathogen interactions, Ann Bot, vol.115, pp.717-731, 2015.

E. Foo, S. N. Blake, B. J. Fisher, . Smith, and J. B. Reid, The role of strigolactones during plant interactions with the pathogenic fungus Fusarium oxysporum, Planta, vol.243, pp.1387-1396, 2016.

E. Foo, E. Bullier, M. Goussot, F. Foucher, C. Ramean et al., The Branching Gene RAMOSUS1 Mediates Interactions among Two Novel Signals and Auxin in Pea, Plant Cell, vol.17, pp.464-474, 2005.

E. Foo and N. W. Davies, Strigolactones promote nodulation in pea, Planta, vol.234, pp.1073-1081, 2011.

. Foroud-n-a and F. Eudes, Trichothecenes in cereal grains, Int J Mol Sci, vol.10, pp.147-173, 2009.

L. J. Francl and . The, Disease Triangle: A Plant Pathological Paradigm Revisited, 2001.

C. M. Fraser and C. Chapple, The Phenylpropanoid Pathway in Arabidopsis, Arab B, vol.9, p.152, 2011.

D. Frear, H. Swanson, and R. Tanaka, N-demethylation of substituted 3-(phenyl)-1-methylureas: Isolation and characterization of a microsomal mixed function oxidase from cotton, Phytochemistry, vol.8, pp.2157-2169, 1969.

P. Fruhmann, P. Skrinjar, J. Weber, H. Mikula, B. Warth et al., Sulfation of deoxynivalenol, its acetylated derivatives, and T2-toxin, Tetrahedron, vol.70, pp.5260-5266, 2014.

W. E. Fry, B. Gabriac, D. Werck-reichhart, H. Teutsch, and F. Durst, Purification and immunocharacterization of a plant cytochrome P450: The cinnamic acid 4-hydroxylase, Arch Biochem Biophys, vol.288, pp.302-309, 1982.

. Gardiner-s-a, J. Boddu, F. Berthiller, C. Hametner, R. M. Stupar et al., Transcriptome Analysis of the Barley-Deoxynivalenol Interaction: Evidence for a Role of Glutathione in Deoxynivalenol Detoxification, Mol Plant-Microbe Interact, vol.23, pp.962-976, 2010.

D. F. Garvin, Garvin Lab Brachypodium Information, 2016.

M. Gatti, Detoxification of mycotoxins as a source of resistance to Fusarium Head blight: from Brachypodium distachyon to Triticum aestivum, 2017.

R. D. Gietz and R. H. Schiestl, High-efficiency yeast transformation using the LiAc / SS carrier DNA / PEG method, Nat Protoc, vol.2, pp.31-35, 2008.

J. Gilbert and S. Haber, Overview of some recent research developments in fusarium head blight of wheat, Can J Plant Pathol, vol.35, pp.149-174, 2013.

T. Girin, L. C. David, C. Chardin, R. Sibout, A. Krapp et al., Brachypodium: A promising hub between model species and cereals, J Exp Bot, vol.65, pp.5683-5686, 2014.

G. A. , .. E. Hinton, D. M. Yates, I. E. Bacon, and C. W. , Detoxification of Corn Antimicrobial Compounds as the Basis for Isolating Fusarium verticillioides and Some Other Fusarium Species from Corn, Appl Environ Microbiol, vol.67, pp.2973-2981, 2001.

H. Godfray, J. R. Beddington, I. R. Crute, L. Haddad, D. Lawrence et al., Food security: The challenge of feeding 9 billion people, Science, vol.80, pp.812-818, 2010.

S. Goff, , 1999.

V. Gomez-roldan, S. Fermas, P. B. Brewer, V. Puech-pagès, . Dun-e-a et al., Strigolactone inhibition of shoot branching, Nature, vol.455, pp.189-194, 2008.
URL : https://hal.archives-ouvertes.fr/hal-02183111

R. S. Goswami and H. C. Kistler, Heading for disaster: Fusarium graminearum on cereal crops, Mol Plant Pathol, vol.5, pp.515-525, 2004.

S. Gottwald, B. Samans, S. Lück, and W. Friedt, Jasmonate and ethylene dependent defence gene expression and suppression of fungal virulence factors: Two essential mechanisms of Fusarium head blight resistance in wheat?, BMC Genomics, 2012.

Y. Guéguen, K. Mouzat, L. Ferrari, E. Tissandie, . Batt-a.-m et al., Les cytochromes P450: Métabolisme des xénobiotiques, régulation et rôle en clinique, Ann Biol Clin, vol.64, pp.535-548, 2006.

F. P. Guengerich, Common and Uncommon Cytochrome P450 Reactions Related to Metabolism and Chemical Toxicity, Chem Res Toxicol, vol.14, pp.611-650, 2001.

J. C. Guenther and F. Trail, The development and differentiation of Gibberella zeae (anamorph: Fusarium graminearum) during colonization of wheat, Mycologia, vol.97, pp.229-237, 2005.

L. R. Gunupuru, P. A. Doohan, and F. M. , Deoxynivalenol resistance as a component of FHB resistance, Trop Plant Pathol, vol.42, pp.175-183, 2017.

C. Guzman, R. J. Peña, R. Singh, E. Autrique, S. Dreisigacker et al., Wheat quality improvement at CIMMYT and the use of genomic selection on it, Appl Transl Genomics, vol.11, pp.3-8, 2016.

X. Ha, B. Koopmann, and A. Von-tiedemann, Wheat blast and fusarium head blight display contrasting interaction patterns on ears of wheat genotypes differing in resistance, Phytopathology, vol.1, p.12, 2015.

H. E. Hallen-adams, N. Wenner, . Kuldau-g-a, and F. Trail, Deoxynivalenol BiosynthesisRelated Gene Expression During Wheat Kernel Colonization by Fusarium graminearum, Phytopathology, vol.101, pp.1091-1096, 2011.

F. Hannemann, A. Bichet, K. M. Ewen, and R. Bernhardt, Cytochrome P450 systemsbiological variations of electron transport chains, Biochim Biophys Acta -Gen Subj, vol.1770, pp.330-344, 2007.

P. J. Harrison and T. Bugg, Enzymology of the carotenoid cleavage dioxygenases: Reaction mechanisms, inhibition and biochemical roles, Arch Biochem Biophys, vol.544, pp.105-111, 2014.

H. A. Stirnberg, P. Beveridge, C. Leyser, and O. , Interactions between Auxin and Strigolactone in Shoot Branching Control, Plant Physiol, vol.151, pp.400-412, 2009.

J. W. He, G. S. Bondy, T. Zhou, D. Caldwell, G. J. Boland et al., Toxicology of 3-epi-deoxynivalenol, a deoxynivalenol-transformation product by Devosia mutans 17-2-E-8, Food Chem Toxicol, vol.84, pp.250-259, 2015.

P. Hedden and S. G. Thomas, Gibberellin biosynthesis and its regulation, Biochem J, vol.444, pp.11-25, 2012.

. Himmelbach-a, U. Zierold, G. Hensel, J. Riechen, D. Douchkov et al., A Set of Modular Binary Vectors for Transformation of Cereals, Plant Physiol, vol.145, pp.1192-1200, 2007.

R. Höfer, B. Boachon, H. Renault, C. Gavira, L. Miesch et al., Dual function of the CYP76 family from Arabidopsis thaliana in the metabolism of monoterpenols and phenylurea herbicides, Plant Physiol, vol.166, pp.1149-1161, 2014.

R. Höfer, L. Dong, F. André, J. F. Ginglinger, R. Lugan et al., Geraniol hydroxylase and hydroxygeraniol oxidase activities of the CYP76 family of cytochrome P450 enzymes and potential for engineering the early steps of the (seco)iridoid pathway, Metab Eng, vol.20, pp.221-232, 2013.

A. N. Hofstad, T. Nussbaumer, E. Akhunov, S. Shin, K. G. Kugler et al., Examining the Transcriptional Response in Wheat NearIsogenic Lines to Infection and Deoxynivalenol Treatment, Plant Genome, 2016.

T. M. Hohn and F. Vanmiddlesworth, Purification and characterization of the sesquiterpene cyclase trichodiene synthetase from Fusarium sporotrichioides, Arch Biochem Biophys, vol.251, pp.756-761, 1986.

Z. Hu, T. Yamauchi, J. Yang, Y. Jikumaru, T. Tsuchida-mayama et al., Strigolactone and cytokinin act antagonistically in regulating rice mesocotyl elongation in darkness, Plant Cell Physiol, vol.55, pp.30-41, 2014.

M. T. Huang, Y. C. Lu, S. Zhang, F. Luo, and H. Yang, Rice (Oryza sativa) Laccases Involved in Modification and Detoxification of Herbicides Atrazine and Isoproturon Residues in Plants, J Agric Food Chem, vol.64, pp.6397-6406, 2016.

. Ima, The International Plant Names Index, 2018.

M. Ito, I. Sato, M. Ishizaka, S. I. Yoshida, M. Koitabashi et al., Bacterial cytochrome P450 System catabolizing the Fusarium toxin deoxynivalenol, 2013.

, Appl Environ Microbiol, vol.79, pp.1619-1628

U. B. Jagtap, V. A. Bapat, C. Jansen, D. Von-wettstein, W. Schafer et al., Infection patterns in barley and wheat spikes inoculated with wild-type and trichodiene synthase gene disrupted Fusarium graminearum, Proc Natl Acad Sci, vol.197, pp.16892-16897, 2005.

H. Jia, S. Cho, and G. J. Muehlbauer, Transcriptome Analysis of a Wheat Near-Isogenic Line Pair Carrying Fusarium Head Blight-Resistant and -Susceptible Alleles, Mol PlantMicrobe Interact, vol.22, pp.1366-1378, 2009.

H. Jia, B. P. Millett, S. Cho, H. Bilgic, W. W. Xu et al., Quantitative trait loci conferring resistance to Fusarium head blight in barley respond differentially to Fusarium graminearum infection, Funct Integr Genomics, vol.11, pp.95-102, 2011.

L. Jiang, X. Liu, G. Xiong, H. Liu, F. Chen et al., DWARF 53 acts as a repressor of strigolactone signalling in rice, Nature, vol.504, pp.401-405, 2013.

J. A. , .. W. Rosebery, G. Parker, and C. , A novel approach to Striga and Orobanche control using synthetic germination stimulants, Weed Res, vol.16, pp.223-227, 1976.

D. T. Jones, W. R. Taylor, and J. M. Thornton, The rapid generation of mutation data matricies from protein sequences, Comput Appl Biosci, vol.8, pp.275-282, 1992.

E. Khoury, A. E. Atoui, and A. , Ochratoxin a: General overview and actual molecular status, Toxins (Basel), vol.2, pp.461-493, 2010.

E. Khoury, W. Makkouk, and K. , Integrated plant disease managment in developing countries, J Plant Pathol, vol.92, 2010.

J. E. Kim, K. M. Cheng, N. E. Craft, B. Hamberger, and C. J. Douglas, Over-expression of Arabidopsis thaliana carotenoid hydroxylases individually and in combination with a ?-carotene ketolase provides insight into in vivo functions, Phytochemistry, vol.71, pp.168-178, 2010.

M. Klingenberg, Pigments of rat liver microsomes, Arch Biochem Biophys, vol.75, pp.376-386, 1958.

M. B. Klix, J. A. Verreet, and M. Beyer, Comparison of the declining triazole sensitivity of Gibberella zeae and increased sensitivity achieved by advances in triazole fungicide development, Crop Prot, vol.26, pp.683-690, 2007.

B. Kluger, C. Bueschl, M. Lemmens, H. Michlmayr, A. Malachova et al., Biotransformation of the mycotoxin deoxynivalenol in fusarium resistant and susceptible near isogenic wheat lines, PLoS One, 2015.

W. Kohlen, T. Charnikhova, M. Lammers, T. Pollina, P. Tóth et al., The tomato CAROTENOID CLEAVAGE DIOXYGENASE8 ( SlCCD8 ) regulates rhizosphere signaling, plant architecture and affects reproductive development through strigolactone biosynthesis, New Phytol, vol.196, pp.535-547, 2012.

L. Kong, J. M. Anderson, and H. W. Ohm, Induction of wheat defense and stress-related genes in response to Fusarium graminearum, Genome, vol.48, pp.29-40, 2005.

A. Kosaka, A. Manickavelu, D. Kajihara, H. Nakagawa, and T. Ban, Altered gene expression profiles of wheat genotypes against Fusarium head blight, Toxins (Basel), vol.7, pp.604-620, 2015.

Y. Kouzai, M. Kimura, Y. Yamanaka, M. Watanabe, H. Matsui et al., Expression profiling of marker genes responsive to the defence-associated phytohormones salicylic acid, jasmonic acid and ethylene in Brachypodium distachyon, BMC Plant Biol, vol.16, pp.1-11, 2016.

K. Kowalska, D. E. Habrowska-górczy?ska, and A. W. Piastowska-ciesielska, Zearalenone as an endocrine disruptor in humans, Environ Toxicol Pharmacol, vol.48, pp.141-149, 2016.

K. G. Kugler, G. Siegwart, T. Nussbaumer, C. Ametz, M. Spannagl et al., Quantitative trait loci-dependent analysis of a gene co-expression network associated with Fusarium head blight resistance in bread wheat, Triticum aestivum L.). BMC Genomics, 2013.

P. Kumar, S. Henikoff, and P. C. Ng, Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm, Nat Protoc, vol.4, pp.1073-1082, 2009.

S. Kumar, G. Stecher, and K. Tamura, MEGA7 : Molecular Evolutionary Genetics Analysis Version 7 . 0 for Bigger Datasets, Mol Biol Evol, vol.33, pp.1870-1874, 2017.

E. Kvesitadze, T. Sadunishvili, and G. Kvesitadze, Mechanisms of Organic Contaminants Uptake and Degradation in Plants, Int J Biomed Biol Eng, vol.3, pp.361-371, 2009.

G. Kvesitadze, G. Khatisashvili, T. Sadunishvili, and J. J. Ramsden, The fate of organic contaminants in the plant cell, Biochem. Mech. Detoxif. High. Plants Basis Phytoremediation, pp.103-166, 2006.

Y. S. Kwak and D. M. Weller, Take-all of wheat and natural disease suppression: A review, Plant Pathol J, vol.29, pp.125-135, 2013.

J. Lacey, G. L. Bateman, and C. J. Mirocha, Effects of infection time and moisture on development of ear blight and deoxynivalenol production by Fusarium spp, 1999.

, Ann Appl Biol, vol.134, pp.277-283

M. Lemmens, U. Scholz, F. Berthiller, C. Koutnik, A. Schuhmacher et al., The Ability to Detoxify the Mycotoxin Deoxynivalenol Colocalizes With a Major Quantitative Trait Locus for Fusarium Head Blight Resistance in Wheat, Mol Plant-Microbe Interact, vol.18, pp.1318-1324, 2005.

G. Lepesheva and M. R. Waterman, Sterol 14?-Demethylase Cytochrome P450 (CYP51), a P450 in all Biological Kingdoms, Biochim Biophys Acta, vol.6, pp.247-253, 2009.

C. Li, H. Rudi, E. J. Stockinger, H. Cheng, M. Cao et al., Comparative analyses reveal potential uses of Brachypodium distachyon as a model for cold stress responses in temperate grasses, BMC Plant Biol, 2012.

G. Li and Y. Yen, Jasmonate and ethylene signaling pathway may mediate Fusarium head blight resistance in wheat, Crop Sci, vol.48, pp.1888-1896, 2008.

H. Li, Y. Lu, J. Wang, and M. Zhou, Cloning of beta-tubulin gene from Gibberella zeae and analysis its relationship with carbendazim-resistance, Wei Sheng Wu Xue Bao, vol.43, pp.424-429, 2003.

S. Li, Y. Li, and C. D. Smolke, Strategies for microbial synthesis of high-value phytochemicals, Nat Chem, vol.10, pp.395-404, 2018.

X. Li, S. Shin, S. Heinen, R. Dill-macky, F. Berthiller et al., Transgenic Wheat Expressing a Barley UDPGlucosyltransferase Detoxifies Deoxynivalenol and Provides High Levels of Resistance to Fusarium graminearum, Mol Plant-Microbe Interact, vol.28, pp.1237-1246, 2015.

X. Li, S. Sun, C. Li, S. Qiao, T. Wang et al., The strigolactonerelated mutants have enhanced lamina joint inclination phenotype at the seedling stage, J Genet Genomics, vol.41, pp.605-608, 2014.

X. Li, J. B. Zhang, B. Song, H. P. Li, H. Q. Xu et al., Resistance to Fusarium head blight and seedling blight in wheat is associated with activation of a cytochrome p450 gene, Phytopathology, vol.100, pp.183-191, 2010.

H. Lin, R. Wang, Q. Qian, M. Yan, X. Meng et al., DWARF27, an Iron-Containing Protein Required for the Biosynthesis of Strigolactones, Regulates Rice Tiller Bud Outgrowth, Plant Cell Online, vol.21, pp.1512-1525, 2009.

E. M. Linsmaier and F. Skoog, Organic Growth Factor Requirements of Tobacco Tissue Cultures, Physiol Plant, vol.18, pp.100-127, 1965.

K. J. Livak and T. D. Schmittgen, Analysis of relative gene expression data using real-time quantitative PCR and the 2-??CT method, Methods, vol.25, pp.402-408, 2001.

D. B. Lobell, W. Schlenker, and J. Costa-roberts, Climate trends and global crop production since 1980, Science (80-), vol.333, pp.616-620, 2011.

C. Longin, Future of Wheat Breeding is Driven by Hybrid Wheat and Efficient Strategies for Pre-Breeding on Quantitative Traits, Res Rev J Bot Sci, vol.32, p.33, 2016.

J. A. López-ráez, K. Shirasu, and E. Foo, Strigolactones in Plant Interactions with Beneficial and Detrimental Organisms: The Yin and Yang, Trends Plant Sci, 2017.

J. Lu, J. Hu, G. Zhao, F. Mei, and C. Zhang, An In-field Automatic Wheat Disease Diagnosis System, pp.1-15, 2017.

. Lucena-m-a, V. Valpuesta, R. Romero-aranda, and J. Mercado, Structural and physiological changes in the roots of tomato plants over-expressing a basic peroxidase, Physiol Plant, vol.118, pp.422-429, 2003.

K. Luo, H. Rocheleau, P. F. Qi, Y. L. Zheng, H. Y. Zhao et al., Indole-3-acetic acid in Fusarium graminearum: Identification of biosynthetic pathways and characterization of physiological effects, Fungal Biol, vol.120, pp.1135-1145, 2016.

F. Lupton, History of wheat breeding, Wheat Breed. Its Sci. basis, pp.51-70, 1987.

A. K. Machado, N. A. Brown, M. Urban, K. Kanyuka, and K. Hammond-kosack, RNAi as an emerging approach to control Fusarium Head Blight disease and mycotoxin contamination in cereals, Pest Manag Sci, vol.74, pp.790-799, 2017.

F. J. Maier, T. Miedaner, B. Hadeler, A. Felk, S. Salomon et al., Involvement of trichothecenes in fusarioses of wheat, barley and maize evaluated by gene disruption of the trichodiene synthase (Tri5) gene in three field isolates of different chemotype and virulence, Mol Plant Pathol, vol.7, pp.449-461, 2006.

O. C. Maloy, Plant Disease Management. Plant Heal Instr, 2005.

K. K. Mandadi, J. D. Pyle, and K. G. Scholthof, Comparative analysis of antiviral responses in Brachypodium distachyon and Setaria viridis reveals conserved and unique outcomes among C3 and C4 plant defenses, Mol Plant Microbe Interact, vol.27, pp.1277-1290, 2014.

K. K. Mandadi, K. Scholthof, and . Bg, Characterization of a viral synergism in the monocot Brachypodium distachyon reveals distinctly altered host molecular processes associated with disease, Plant Physiol, vol.160, pp.1432-1452, 2012.

C. Martinez, M. Buée, A. Jauneau, G. Bécard, R. Dargent et al., Effects of a fraction from maize root exudates on haploid strains of sporisorium reilianum f. sp. zeae, Plant Soil, vol.236, pp.145-153, 2001.

M. Marzec and A. Muszynska, In Silico analysis of the genes encoding proteins that are involved in the biosynthesis of the RMS/MAX/D pathway revealed new roles of strigolactones in plants, Int J Mol Sci, vol.16, pp.6757-6782, 2015.

D. Masuda, M. Ishida, K. Yamaguchi, I. Yamaguchi, M. Kimura et al., Phytotoxic effects of trichothecenes on the growth and morphology of Arabidopsis thaliana, J Exp Bot, vol.58, pp.1617-1626, 2007.

Y. Matsuoka, Y. Vigouroux, M. M. Goodman, G. Sanchez, E. Buckler et al., A single domestication for maize shown by multilocus microsatellite genotyping, Proc Natl Acad Sci U S A, vol.99, pp.6080-6084, 2002.

R. Matusova, K. Rani, F. Verstappen, M. Franssen, M. Beale et al., The Strigolactone Germination Stimulants of the Plant-Parasitic Striga and Orobanche spp. Are Derived from the Carotenoid Pathway, Plant Physiol, vol.139, pp.920-934, 2005.

M. Mazaheri-naeini, S. K. Sabbagh, Y. Martinez, N. Séjalon-delmas, and C. Roux, Assessment of Ustilago maydis as a fungal model for root infection studies, Fungal Biol, vol.119, pp.145-153, 2015.

P. M. Mazumder and D. Sasmal, Mycotoxins -limits and regulations, Anc Sci Life, vol.20, pp.1-19, 2001.

. Mccartney-c-a, D. J. Somers, G. Fedak, R. M. Depauw, J. Thomas et al., The evaluation of FHB resistance QTLs introgressed into elite Canadian spring wheat germplasm, Mol Breed, vol.20, pp.209-221, 2007.

S. P. Mccormick, A. M. Stanley, . Stover-n-a, and N. J. Alexander, Trichothecenes: From simple to complex mycotoxins, Toxins (Basel), vol.3, pp.802-814, 2011.

M. Mclean, The phytotoxicity of selected mycotoxins on mature, germinating Zea mays embryos, Mycopathologia, vol.132, pp.173-183, 1995.

M. Mcmullen, G. Bergstrom, D. Wolf, E. Dill-macky, R. Hershman et al., Fusarium Head Blight Disease Cycle , Symptoms , and Impact on Grain Yield and Quality Frequency and Magnitude of Epidemics Since, Plant Dis, 1997.

M. Mcmullen, S. Halley, B. Schatz, S. Meyer, J. Jordahl et al., Integrated strategies for Fusarium head blight management in the United States, Cereal Res Commun, vol.36, pp.563-568, 2008.

D. W. Meinke, Arabidopsis thaliana: A Model Plant for Genome Analysis, Science (80-), vol.282, pp.662-682, 1998.

J. Merhej, B. A. Pinson-gadais, L. , R. , F. Barreau et al., Acidic pH as a determinant of TRI gene expression and trichothecene B biosynthesis in Fusarium graminearum, Food Addit Contam Part A, vol.27, pp.710-717, 2010.

A. Mesterhazy, Types and components of resistance to Fusarium head blight of wheat, Plant Breed, vol.114, pp.377-386, 1995.

M. Miransari, A. A. Khoshbakht, K. Niknam, and V. , Plant hormones as signals in arbuscular mycorrhizal symbiosis, Crit Rev Biotechnol, vol.34, pp.123-133, 2014.

M. Mizutani, Impacts of diversification of cytochrome P450 on plant metabolism, Biol Pharm Bull, vol.35, pp.824-832, 2012.

M. Mizutani and D. Ohta, Diversification of P450 Genes During Land Plant Evolution, Annu Rev Plant Biol, vol.61, pp.291-315, 2010.

M. Mizutani and F. Sato, Unusual P450 reactions in plant secondary metabolism, Arch Biochem Biophys, vol.507, pp.194-203, 2011.

K. Mochida and K. Shinozaki, Unlocking triticeae genomics to sustainably feed the future, Plant Cell Physiol, vol.54, pp.1931-1950, 2013.

J. Molina, M. Sikora, N. Garud, J. M. Flowers, S. Rubinstein et al., Molecular evidence for a single evolutionary origin of domesticated rice, Proc Natl Acad Sci, vol.108, pp.8351-8356, 2011.

S. Mondal, J. E. Rutkoski, G. Velu, P. K. Singh, . Crespo-herrera-l-a et al., Harnessing Diversity in Wheat to Enhance Grain Yield, Climate Resilience, Disease and Insect Pest Resistance and Nutrition Through Conventional and Modern Breeding Approaches, Front Plant Sci, vol.7, pp.1-15, 2016.

T. Morikawa, M. Mizutani, N. Aoki, B. Watanabe, H. Saga et al., Cytochrome P450 CYP710A Encodes the Sterol C-22 Desaturase in Arabidopsis and Tomato, PLANT CELL ONLINE, vol.18, pp.1008-1022, 2006.

J. Mühleisen, H. P. Piepho, H. P. Maurer, C. Longin, and J. C. Reif, Yield stability of hybrids versus lines in wheat, barley, and triticale, Theor Appl Genet, vol.127, pp.309-316, 2014.

Y. Muhovski, Molecular and genetic characterization of Fusarium head blight resistance in winter wheat Centenaire, 2012.

T. Murashige and F. Skoog, A Revised Medium for Rapid Growth and Bio Assays with Tobacco Tissue Cultures, Physiol Plant, vol.15, pp.473-497, 1962.

G. Nagahashi and D. D. Douds, Partial separation of root exudate components and their effects upon the growth of germinated spores of AM fungi, Mycol Res, vol.104, pp.1453-1464, 2000.

V. J. Nalam, M. I. Vales, C. Watson, S. F. Kianian, and O. Riera-lizarazu, Map-based analysis of genes affecting the brittle rachis character in tetraploid wheat, Triticum turgidum L.). Theor Appl Genet, vol.112, pp.373-381, 2006.

D. Nelson and D. Werck-reichhart, A P450-centric view of plant evolution, Plant J, vol.66, pp.194-211, 2011.
URL : https://hal.archives-ouvertes.fr/hal-00612866

D. C. Nelson, S. A. Waters, M. T. Flematti, G. R. Dixon, K. W. Beveridge et al., F-box protein MAX2 has dual roles in karrikin and strigolactone signaling in Arabidopsis thaliana, Proc Natl Acad Sci, vol.108, pp.8897-8902, 2011.

D. R. Nelson, Comparative Genomics of Rice and Arabidopsis, Analysis, p.727, 2004.

, Cytochrome P450 Genes and Pseudogenes from a Monocot and a Dicot, Plant Physiol, vol.135, pp.756-772

D. R. Nelson, The cytochrome p450 homepage, Hum Genomics, vol.4, pp.59-65, 2009.

D. R. Nelson, R. Ming, M. Alam, and M. Schuler, Comparison of Cytochrome P450 Genes from Six Plant Genomes, Trop Plant Biol, vol.1, pp.216-235, 2008.

W. Nganje, D. Bangsund, and F. Leistritz, Estimating the economic impact of a crop disease: the case of Fusarium head blight in US wheat and barley. Natl. Fusarium Head Blight Forum Proc, pp.275-281, 2002.

T. Nussbaumer, B. Warth, S. Sharma, C. Ametz, C. Bueschl et al., Joint Transcriptomic and Metabolomic Analyses Reveal Changes in the Primary Metabolism and Imbalances in the Subgenome Orchestration in the Bread Wheat Molecular Response to Fusarium graminearum, G3, vol.5, pp.2579-2592, 2015.

A. O'driscoll, F. Doohan, and E. Mullins, Exploring the utility of Brachypodium distachyon as a model pathosystem for the wheat pathogen Zymoseptoria tritici Plant Biology, BMC Res Notes, vol.8, pp.1-10, 2015.

D. P. O'keefe and K. J. Leto, Cytochrome P-450 from the Mesocarp of Avocado (Persea americana), Plant Physiol, vol.89, pp.1141-1149, 1989.

E. Oerke, Crop losses to pests, J Agric Sci, vol.144, pp.31-43, 2006.

H. Ogle, Disease management: exclusion, eradication and elimination, Plant Pathog. Plant Dis, pp.358-372, 1997.

T. Omura and R. Sato, The Carbon Monoxide-biding pigment of Liver Microsomes, J Biol Chem, vol.239, pp.2370-2378, 1964.

A. Palisot-de-beauvois, Essai d'une nouvelle agrostographie, ou, Nouveaux genres des graminées: avec figures représentant les caractères de tous les genres, p.182, 1812.

C. Parker, Observations on the current status of orobanche and striga problems worldwide, Pest Manag Sci, vol.65, pp.453-459, 2009.

M. Parniske, Arbuscular mycorrhiza: the mother of plant root endosymbioses, Nat Rev Microbiol, vol.6, pp.763-75, 2008.

D. W. Parry, P. Jenkinson, and L. Mcleod, Fusarium ear blight (scab) in small grain cereals-a review, Plant Pathol, vol.44, pp.207-238, 1995.

M. Pasquali and Q. Migheli, Genetic approaches to chemotype determination in type Btrichothecene producing Fusaria, Int J Food Microbiol, vol.189, pp.164-182, 2014.

J. Pasquet, Détoxication des mycotoxines par les plantes: analyse de l'interaction entre Brachypodium distachyon et Fusarium graminearum, 2014.

J. Pasquet, V. Changenet, C. Macadré, E. Boex-fontvieille, C. Soulhat et al., A Brachypodium UDP-glycosytransferase confers root tolerance to deoxynivalenol and resistance to Fusarium infection, Plant Physiol, vol.172, pp.559-574, 2016.

J. Pasquet, S. Chaouch, C. Macadré, S. Balzergue, S. Huguet et al., Differential gene expression and metabolomic analyses of Brachypodium distachyon infected by deoxynivalenol producing and non-producing strains of Fusarium graminearum, BMC Genomics, vol.15, p.629, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01063227

. Paul-p-a, P. E. Lipps, D. E. Hershman, M. P. Mcmullen, . Draper-m-a et al., Efficacy of Triazole-Based Fungicides for Fusarium Head Blight and Deoxynivalenol Control in Wheat: A Multivariate Meta-Analysis, Phytopathology, vol.98, pp.999-1011, 2008.

P. A. Paul, P. E. Lipps, D. E. Hershman, M. P. Mcmullen, M. A. Draper et al., A quantitative review of tebuconazole effect on Fusarium Head Blight and deoxynivalenol content in Wheat, Phytopathology, vol.97, pp.211-220, 2007.

D. Payros, I. Alassane-kpembi, A. Pierron, N. Loiseau, P. Pinton et al., Toxicology of deoxynivalenol and its acetylated and modified forms, Arch Toxicol, vol.90, pp.2931-2957, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01608637

. Peraldi-a, L. L. Griffe, C. Burt, G. Mcgrann, and P. Nicholson, Brachypodium distachyon exhibits compatible interactions with Oculimacula spp. and Ramularia collocygni, providing the first pathosystem model to study eyespot and ramularia leaf spot diseases, Plant Pathol, vol.63, pp.554-562, 2014.

A. Peraldi, G. Beccari, A. Steed, and P. Nicholson, Brachypodium distachyon: a new pathosystem to study Fusarium head blight and other Fusarium diseases of wheat, BMC Plant Biol, vol.11, p.100, 2011.

S. A. Pereyra, R. Dill-macky, and A. L. Sims, Survival and Inoculum Production of Gibberella zeae in Wheat Residue, Plant Dis, vol.88, pp.724-730, 2004.

. Phongdara-a,-nakkaew-a and S. Nualkaew, Isolation of the detoxification enzyme EgP450 from an oil palm EST library, Pharm Biol, vol.50, pp.120-127, 2012.

. Pierrel-m-a, Y. Batard, M. Kazmaier, C. Mignottevieux, F. Durst et al., Catalytic Properties of the Plant Cytochrome-P450 Cyp73 Expressed in YeastSubstrate-Specificity of a Cinnamate Hydroxylase, Eur J Biochem, vol.224, pp.835-844, 1994.

C. Pieterse, A. Leon-reyes, S. Van-der-ent, and S. Van-wees, Networking by small-molecule hormones in plant immunity, Nat Chem Biol, vol.5, pp.308-316, 2009.

M. Piisilä, . Keceli-m-a, G. Brader, L. Jakobson, I. Jõesaar et al., The F-box protein MAX2 contributes to resistance to bacterial phytopathogens in Arabidopsis thaliana, BMC Plant Biol, vol.15, p.53, 2015.

M. Pimentel, M. Escudero, E. Sahuquillo, M. Á. Minaya, and P. Catalán, Are diversification rates and chromosome evolution in the temperate grasses (Pooideae) associated with major environmental changes in the Oligocene-Miocene?, PeerJ, vol.5, p.3815, 2017.

F. Pinot and F. Beisson, Cytochrome P450 metabolizing fatty acids in plants: Characterization and physiological roles, FEBS J, vol.278, pp.195-205, 2011.

D. Pompon, B. Louerat, A. Bronine, and P. Urban, Yeast expression of animal and plant P450s in optimized redox environments, Methods Enzymol, vol.272, pp.51-64, 1996.

N. Ponts, L. Pinson-gadais, C. Barreau, F. Richard-forget, and T. Ouellet, Exogenous H2O2 and catalase treatments interfere with Tri genes expression in liquid cultures of Fusarium graminearum, FEBS Lett, vol.581, pp.443-447, 2007.

B. Poppenberger, F. Berthiller, D. Lucyshyn, T. Sieberer, R. Schuhmacher et al., Detoxification of the Fusarium Mycotoxin Deoxynivalenol by a UDP-glucosyltransferase from Arabidopsis thaliana, J Biol Chem, vol.278, pp.47905-47914, 2003.

J. J. Powell, J. Carere, T. L. Fitzgerald, J. Stiller, L. Covarelli et al., The Fusarium crown rot pathogen Fusarium pseudograminearum triggers a suite of transcriptional and metabolic changes in bread wheat (Triticum aestivum L.), Ann Bot, vol.119, pp.853-867, 2017.

N. Rawat, M. O. Pumphrey, S. Liu, X. Zhang, V. K. Tiwari et al., Wheat Fhb1 encodes a chimeric lectin with agglutinin domains and a pore-forming toxin-like domain conferring resistance to Fusarium head blight, Nat Genet, vol.48, pp.1576-1580, 2016.

J. C. Reif, P. Zhang, S. Dreisigacker, M. L. Warburton, M. Van-ginkel et al., Wheat genetic diversity trends during domestication and breeding, Theor Appl Genet, vol.110, pp.859-864, 2005.

H. Renault, J. E. Bassard, B. Hamberger, and D. Werck-reichhart, Cytochrome P450-mediated metabolic engineering: current progress and future challenges, Curr Opin Plant Biol, vol.19, pp.27-34, 2014.

K. C. Roach, M. Feretzaki, S. Sun, and J. Heitman, Unisexual reproduction, Adv Genet, vol.85, pp.255-305, 2014.

T. Robineau, Y. Batard, S. Nedelkina, F. Cabello-hurtado, M. Leret et al., The chemically inducible plant cytochrome P450 CYP76B1 actively metabolizes phenylureas and other xenobiotics, Plant Physiol, vol.118, pp.1049-1056, 1998.

O. Rocha, K. Ansari, and F. M. Doohan, Effects of trichothecene mycotoxins on eukaryotic cells: A review, Food Addit Contam, vol.22, pp.369-378, 2005.

A. P. Roelfs, Effects of Barberry Eradication on Stem Rust in the United States, Plant Dis, vol.66, p.177, 1982.

A. Routledge, G. Shelley, J. Smith, N. J. Talbot, J. Draper et al., Magnaporthe grisea interactions with the model grass Brachypodium distachyon closely resemble those with rice (Oryza sativa), Mol Plant Pathol, vol.5, pp.253-265, 2004.

P. Rozp?dek, A. M. Domka, M. Nosek, R. Wa?ny, R. J. J?drzejczyk et al., The Role of Strigolactone in the Cross-Talk Between Arabidopsis thaliana and the Endophytic Fungus Mucor sp, Front Microbiol, vol.9, pp.1-14, 2018.

J. C. Rudd, R. D. Horsley, L. Mckendry-a, and E. M. Elias, Host Plant Resistance Genes for Fusarium Head Blight : Sources , Mechanisms, Crop Sci, vol.41, pp.620-627, 1993.

J. J. Rudd, K. Kanyuka, K. Hassani-pak, M. Derbyshire, A. Andongabo et al., Transcriptome and Metabolite Profiling of the Infection Cycle of Zymoseptoria tritici on Wheat Reveals a Biphasic Interaction with Plant Immunity Involving Differential Pathogen Chromosomal Contributions and a Variation on the Hemibiotrophic Lifest, Plant Physiol, vol.167, pp.1158-1185, 2015.

S. K. Sabbagh, Effect of GR24, a synthetic analogue of strigolactones, on gene expression of solopathogenic strain of sporisorium reilianum, African J Biotechnol, vol.10, pp.15739-15743, 2011.

S. K. Sabbagh, Adaptation à la pénétration racinaire de deux Ustilaginaceae parasites du mais : Ustilago maydis et Sporisorium reilianum -Analyse microscopique et transcriptomique, 2008.

S. K. Sabbagh, M. Mazaheri, N. Panjehkeh, and M. Salari, Transcriptomic analysis of Sporisorium reilianum in response to the strigolactone analogue GR24, Phytopathol Mediterr, vol.51, pp.283-291, 2012.

W. Saeed, S. Naseem, and Z. Ali, Strigolactones Biosynthesis and Their Role in Abiotic Stress Resilience in Plants: A, Critical Review. Front Plant Sci, vol.8, pp.1-13, 2017.

F. Salamini, H. Özkan, A. Brandolini, R. Schäfer-pregl, and W. Martin, Genetics and geography of wild cereal domestication in the near east, Nat Rev Genet, vol.3, pp.429-441, 2002.

A. Salvioli, S. Ghignone, M. Novero, L. Navazio, F. Venice et al., Symbiosis with an endobacterium increases the fitness of a mycorrhizal fungus, raising its bioenergetic potential, ISME J, vol.10, pp.130-144, 2016.

H. Sandermann, Plant metabolism of xenobiotics, Trends Biochem Sci, vol.17, pp.82-84, 1992.

H. Sandermann, Higher plant metabolism of xenobiotics: the "green liver" concept, Pharmacogenetics, vol.4, pp.225-241, 1994.

G. V. Sandoya and M. Buanafina, Differential responses of Brachypodium distachyon genotypes to insect and fungal pathogens, Physiol Mol Plant Pathol, vol.85, pp.53-64, 2014.

D. Sang, D. Chen, G. Liu, Y. Liang, L. Huang et al., Strigolactones regulate rice tiller angle by attenuating shoot gravitropism through inhibiting auxin biosynthesis, Proc Natl Acad Sci, vol.111, pp.11199-11204, 2014.

K. Satoh, K. Yoneyama, H. Kondoh, T. Shimizu, T. Sasaya et al., Relationship between gene responses and symptoms induced by Rice grassy stunt virus, Front Microbiol, vol.4, p.313, 2013.

M. Schalk, M. Pierrel, A. Zimmerlin, Y. Batard, F. Durst et al., Xenobiotics : Substrates and Inhibitors of the Plant Cytochrome P450, Enzyme, vol.3, pp.229-234, 1997.

C. Schmeitzl, B. Warth, P. Fruhmann, H. Michlmayr, A. Malachová et al., The metabolic fate of deoxynivalenol and its acetylated derivatives in a wheat suspension culture: Identification and detection of DON-15-O-glucoside, 2015.

, Toxins (Basel), vol.7, pp.3112-3126

M. Schmidt-heydt, M. N. Geisen, and R. , Stress induction of mycotoxin biosynthesis genes by abiotic factors, FEMS Microbiol Lett, vol.284, pp.142-149, 2008.

K. Schneebeli, U. Mathesius, and M. Watt, Brachypodium distachyon is a pathosystem model for the study of the wheat disease rhizoctonia root rot, Plant Pathol, vol.64, pp.91-100, 2015.

W. S. Schneider-c-a,-rasband and K. W. Eliceiri, NIH Image to ImageJ : 25 years of image analysis HISTORICAL commentary NIH Image to ImageJ : 25 years of image analysis, Nat Methods, vol.9, pp.671-675, 2012.

. Schuler-m-a and D. Werck-reichhart, Functional Genomics of P450s, Annu Rev Plant Biol, vol.54, pp.629-667, 2003.

J. Schumacher, A. Simon, K. C. Cohrs, M. Viaud, and P. Tudzynski, The Transcription Factor BcLTF1 Regulates Virulence and Light Responses in the Necrotrophic Plant Pathogen Botrytis cinerea, PLoS Genet, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01019558

. Schüßler-a, D. Chwarzott, and C. Walker, A new fungal phylum, the Glomeromy-cota: phylogeny and evolution, Mycol Res, vol.105, pp.1413-1421, 2001.

W. Schweiger, J. Boddu, S. Shin, B. Poppenberger, F. Berthiller et al., Validation of a Candidate Deoxynivalenol-Inactivating UDPGlucosyltransferase from Barley by Heterologous Expression in Yeast, Mol PlantMicrobe Interact, vol.23, pp.977-986, 2010.

W. Schweiger, J. Pasquet, T. Nussbaumer, M. Paris, G. Wiesenberger et al., Functional characterization of two clusters of Brachypodium distachyon UDP-glycosyltransferases encoding putative deoxynivalenol detoxification genes, Mol Plant Microbe Interact, vol.26, pp.781-92, 2013.

W. Schweiger, B. Steiner, C. Ametz, G. Siegwart, G. Wiesenberger et al., Transcriptomic characterization of two major Fusarium resistance quantitative trait loci (QTLs), Fhb1 and Qfhs.ifa-5A, identifies novel candidate genes, Mol Plant Pathol, vol.14, pp.772-785, 2013.

C. Screpanti, K. Yoneyama, and H. J. Bouwmeester, Strigolactones and parasitic weed management 50 years after the discovery of the first natural strigolactone strigol: status and outlook, Pest Manag Sci, vol.72, pp.2013-2015, 2016.

K. Y. Seong, M. Pasquali, X. Zhou, J. Song, K. Hilburn et al., Global gene regulation by Fusarium transcription factors Tri6 and Tri10 reveals adaptations for toxin biosynthesis, Mol Microbiol, vol.72, pp.354-367, 2009.

Y. Seto, A. Sado, K. Asami, A. Hanada, M. Umehara et al., Carlactone is an endogenous biosynthetic precursor for strigolactones, Proc Natl Acad Sci U S A, vol.111, pp.1640-1645, 2014.

P. R. Shewry, J Exp Bot, vol.60, pp.1537-1553, 2009.

S. Shin, J. Torres-acosta, J. Heinden, S. Mccormick, M. Lemmens et al., Transgenic Arabidopsis thaliana expressing a barley methylation and chromatin patterning UDP-glucosyltransferase exhibit resistance to the mycotoxin deoxynivalenol, J Exp Bot, vol.63, pp.4731-4740, 2012.

N. Shinohara, C. Taylor, and O. Leyser, Strigolactone Can Promote or Inhibit Shoot Branching by Triggering Rapid Depletion of the Auxin Efflux Protein PIN1 from the Plasma Membrane, PLoS Biol, 2013.

B. Siminszky, Plant cytochrome P450-mediated herbicide metabolism, Phytochem Rev, vol.5, pp.445-458, 2006.

B. Siminszky, F. T. Corbin, E. R. Ward, T. J. Fleischmann, and R. E. Dewey, Expression of a soybean cytochrome P450 monooxygenase cDNA in yeast and tobacco enhances the metabolism of phenylurea herbicides, Proc Natl Acad Sci U S A, vol.96, pp.1750-1755, 1999.

K. J. Simons, J. P. Fellers, H. N. Trick, Z. Zhang, Y. S. Tai et al., Molecular characterization of the major wheat domestication gene Q, Genetics, vol.172, pp.547-555, 2006.

R. P. Singh, P. K. Singh, J. Rutkoski, D. P. Hodson, X. He et al., Disease Impact on Wheat Yield Potential and Prospects of Genetic Control, Annu Rev Phytopathol, vol.54, pp.303-325, 2016.

K. C. Macmillan.-london-snowden, A. J. Simkin, B. J. Janssen, K. R. Templeton, H. M. Loucas et al., The Decreased apical dominance1/Petunia hybrida CAROTENOID CLEAVAGE DIOXYGENASE8 gene affects branch production and plays a role in leaf senescence, root growth, and flower development, Smith W (1884) Diseases of Field and Garden Crops, vol.17, pp.746-59, 2005.

R. Soares, A. Ricelli, C. Fanelli, D. Caputo, G. De-cesare et al., Advances, challenges and opportunities for point-of-need screening of mycotoxins in foods and feeds, Analyst, 2018.

M. Sorahinobar, H. Soltanloo, V. Niknam, H. Ebrahimzadeh, B. Moradi et al., Physiological and molecular responses of resistant and susceptible wheat cultivars to Fusarium graminearum mycotoxin extract, Can J Plant Pathol, vol.39, pp.444-453, 2017.

K. Sorefan, J. Booker, K. Haurogné, K. Haurogne, M. Goussot et al., MAX4 and RMS1 are orthologous dioxygenase-like genes that regulate shoot branching in Arabidopsis and pea MAX4 and RMS1 are orthologous dioxygenase-like genes that regulate shoot branching in Arabidopsis and pea, Genes Dev, vol.17, pp.1469-1474, 2003.

R. J. Soreng, P. M. Peterson, K. Romaschenko, G. Davidse, J. K. Teisher et al., A worldwide phylogenetic classification of the Poaceae (Gramineae) II: An update and a comparison of two 2015 classifications, J Syst Evol, vol.55, pp.259-290, 2017.

J. M. Soriano, L. González, and C. A. , Mechanism of action of sphingolipids and their metabolites in the toxicity of fumonisin B1, Prog Lipid Res, vol.44, pp.345-356, 2005.

G. Steinberg, Cell biology of Zymoseptoria tritici: Pathogen cell organization and wheat infection, Fungal Genet Biol, vol.79, pp.17-23, 2015.

B. Steiner, H. Kurz, M. Lemmens, and H. Buerstmayr, Differential gene expression of related wheat lines with contrasting levels of head blight resistance after Fusarium graminearum inoculation, Theor Appl Genet, vol.118, pp.753-764, 2009.

S. Steinkellner, V. Lendzemo, I. Langer, P. Schweiger, T. Khaosaad et al., Flavonoids and strigolactones in root exudates as signals in symbiotic and pathogenic plant-fungus interactions, Molecules, vol.12, pp.1290-1306, 2007.

E. Stes, S. Depuydt, D. Keyser, A. Matthys, C. Audenaert et al., Strigolactones as an auxiliary hormonal defence mechanism against leafy gall syndrome in Arabidopsis thaliana, J Exp Bot, vol.66, pp.5123-5134, 2015.

E. Stes, I. Francis, I. Pertry, A. Dolzblasz, S. Depuydt et al., The leafy gall syndrome induced by Rhodococcus fascians, FEMS Microbiol Lett, vol.342, pp.187-195, 2013.

P. Stirnberg, K. Van-de-sande, and H. Leyser, MAX1 and MAX2 control shoot lateral branching in Arabidopsis, Development, vol.129, pp.1131-1172, 2002.

D. L. Sudakin, Trichothecenes in the environment: Relevance to human health, Toxicol Lett, vol.143, pp.97-107, 2003.

M. Umehara, A. Hanada, S. Yoshida, K. Akiyama, T. Arite et al., Inhibition of shoot branching by new terpenoid plant hormones, Nature, vol.455, pp.195-200, 2008.

J. N. Valitova, . Sulkarnayeva-a-g, and F. Minibayeva, Plant Sterols: Diversity, Biosynthesis, and Physiological Functions, vol.81, pp.819-834, 2016.

R. Vallabhaneni, L. Bradbury, and E. T. Wurtzel, The carotenoid dioxygenase gene family in maize, sorghum, and rice, Arch Biochem Biophys, vol.504, pp.104-111, 2010.

A. Viefhues, J. Heller, N. Temme, and P. Tudzynski, Redox systems in Botrytis cinerea: impact on development and virulence, Mol Plant Microbe Interact, vol.27, pp.858-74, 2014.

M. H. Vilmorin, Essais De Croisement Entre Blés Différents, Bull la Société Bot Fr, vol.27, pp.356-361, 1880.

J. Vogel and J. Bragg, Brachypodium distachyon, a New Model for the Triticeae, pp.427-449, 2009.

J. Vogel and T. Hill, High-efficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd21-3, Plant Cell Rep, vol.27, pp.471-478, 2008.

J. P. Vogel, M. Tuna, H. Budak, N. Huo, Y. Q. Gu et al., Development of SSR markers and analysis of diversity in Turkish populations of Brachypodium distachyon, BMC Plant Biol, vol.9, pp.1-11, 2009.

S. Walter and F. Doohan, Transcript profiling of the phytotoxic response of wheat to the Fusarium mycotoxin deoxynivalenol, Mycotoxin Res, vol.27, pp.221-230, 2011.

S. Walter, P. Nicholson, and F. M. Doohan, Action and reaction of host and pathogen during Fusarium head blight disease, New Phytol, vol.185, pp.54-66, 2010.

S. N. Wegulo, P. S. Baenziger, J. Hernandez-nopsa, W. W. Bockus, and H. Hallen-adams, Management of Fusarium head blight of wheat and barley, Crop Prot, vol.73, pp.100-107, 2015.

D. Werck-reichhart, S. Bak, and S. Paquette, Cytochromes p450, Arabidopsis Book, vol.1, p.28, 2002.
URL : https://hal.archives-ouvertes.fr/hal-01738310

W. Oller, A. L. Agostini, E. Capozucca, C. Milrad, S. R. Tigier et al., Overexpression of a basic peroxidase in transgenic tomato (Lycopersicon esculentum Mill. cv. Pera) hairy roots increases phytoremediation of phenol, Plant Sci, vol.169, pp.1102-1111, 2005.

J. H. Williams, T. D. Phillips, P. E. Jolly, J. K. Stiles, C. M. Jolly et al., Human aflatoxin in developing countries: a review of toxicology, exposure, potential health consequences, and interventions, Am J Clin Nutr, vol.80, pp.1106-1122, 2004.

W. Xiang, X. Wang, and T. Ren, Expression of a wheat cytochrome P450 monooxygenase cDNA in yeast catalyzes the metabolism of sulfonylurea herbicides, vol.85, pp.1-6, 2006.

T. Yamada, Y. Kambara, H. Imaishi, and H. Ohkawa, Molecular cloning of novel cytochrome P450 species induced by chemical treatments in cultured tobacco cells, Pestic Biochem Physiol, vol.68, pp.11-25, 2000.

Y. Yamada, S. Furusawa, S. Nagasaka, K. Shimomura, S. Yamaguchi et al., Strigolactone signaling regulates rice leaf senescence in response to a phosphate deficiency, Planta, vol.240, pp.399-408, 2014.

R. Yao, M. Z. Yan, L. Li, S. Wang, F. Ma et al., DWARF14 is a non-canonical hormone receptor for strigolactone, Nature, vol.536, pp.469-473, 2016.

K. Yoneyama, N. Mori, T. Sato, A. Yoda, X. Xie et al., Conversion of carlactone to carlactonoic acid is a conserved function of MAX1 homologs in strigolactone biosynthesis, New Phytol, 2018.

K. Yoneyama, X. Xie, H. Sekimoto, Y. Takeuchi, S. Ogasawara et al., Strigolactones, host recognition signals for root parasitic plants and arbuscular mycorrhizal fungi, from Fabaceae plants, New Phytol, vol.179, pp.484-494, 2008.

M. Yoshida, T. Nakajima, K. Tomimura, F. Suzuki, M. Arai et al., Effect of the Timing of Fungicide Application on Fusarium Head Blight and Mycotoxin Contamination in Wheat, Plant Dis, vol.96, pp.845-851, 2012.

O. Young and H. Beevers, Mixed function oxidases from germinating castor bean endosperm, Phytochemistry, vol.15, pp.379-385, 1976.

Y. Zhang, X. Cheng, Y. Wang, C. Díez-simón, K. Flokova et al., The tomato MAX1 homolog, SlMAX1 , is involved in the biosynthesis of tomato strigolactones from carlactone, New Phytol, 2018.

Y. Zhang, A. Van-dijk, A. Scaffidi, G. R. Flematti, M. Hofmann et al., Rice cytochrome P450 MAX1 homologs catalyze distinct steps in strigolactone biosynthesis, Nat Chem Biol, vol.10, pp.1028-1033, 2014.

J. Zhao, M. Wang, X. Chen, and Z. Kang, Role of Alternate Hosts in Epidemiology and Pathogen Variation of Cereal Rusts, Annu Rev Phytopathol, vol.54, pp.207-228, 2016.

R. L. Zimdahl, Weed Classification. Fundam. Weed Sci, pp.49-61, 2018.

A. V. Zimin, D. Puiu, R. Hall, S. Kingan, B. J. Clavijo et al., The first nearcomplete assembly of the hexaploid bread wheat genome, Triticum aestivum, pp.1-7, 2017.

J. Zou, S. Zhang, W. Zhang, G. Li, Z. Chen et al., The rice HIGH-TILLERING DWARF1 encoding an ortholog of Arabidopsis MAX3 is required for negative regulation of the outgrowth of axillary buds, Plant J, vol.48, pp.687-696, 2006.

B. Zwanenburg and D. Blanco-ania, Strigolactones: new plant hormones in the spotlight, J Exp Bot, 2018.

B. Zwanenburg, H. Regeling, C. W. Van-tilburg-joukema, V. Oss, B. Molenveld et al., Securing Important Strigolactone Key Structures: Orobanchol and 5-Deoxystrigol, European J Org Chem, pp.2163-2169, 2016.