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, No cidA or cidB nucleotide sequence variant was shared between the three wPip groups. However, the wPipII-Lavar CidA_II(?/1) variant and the wPipIII-Slab CidA_III(?/8) variant presented the same amino-acid sequence. Based on their nucleotide sequences wPipIII-Slab exhibited ten variants of cidA, wPipII-Lavar three, wPipI-Tunis four and wPipI Utique seven. However, wPipIII-Slab exhibited only seven variants that differ in their amino-acid sequences since cidA_III(c/6) and cidA_III, Protein sequences alignment of the CidA variants found in the four Wolbachia strains wPipI-Tunis, wPipI-Utique, wPipII-Lavar and wPipIII-Slab (MAL lines)
The repertoire of CidB protein variants in the four MAL line wPip strains ,
, The first sequence is used as a reference to determine the polymorphic region. For more clarity, only polymorphic positions are represented, thus amino-acid positions are not continuous. When more than two contiguous amino-acids were variable the "-" symbol was used between the first and the last variable position of the zone. Colors show polymorphic blocks of residues present in variants regardless of their phylogenetic wPip group (I to III). However, no variant (i.e. complete CidB sequence) is common to wPip strains from different groups. S5 Fig. cidA copy number in the wPip strains infecting the four MAL lines. cidA copy number was measured by quantitative PCR as the ratio between the number of copies of the Wolbachia cidA gene and the Wolbachia wsp gene. The colored dots represent the cidA copy number per wPip genome in a male and the red strips represent the average cidA copy number per wPip genome for ten males per MAL lines, Protein sequences alignment of the CidB variants found in the four Wolbachia strains wPipI-Tunis, wPipI-Utique, wPipII-Lavar and wPipIII-Slab (MAL lines)
, cidB copy number was measured by quantitative PCR as the ratio between the number of copies of the Wolbachia cidB gene and the Wolbachia wsp gene. The colored dots represent the cidB copy number per wPip genome in a male and the red strips represent the average cidB copy number per wPip genome for ten males per MAL lines. Letters represent the different statistical groups, S6 Fig. cidB copy number in the wPip strains infecting the four MAL lines
, S7 Fig. cidA/cidB copy number in the wPip strains infecting the four MAL lines
, The colored dots represent the cidA/cidB copy number per wPip genome in a male and the red strips represent the average cidA/cidB copy number per wPip genome for ten males per MAL lines, cidA/cidB copy number was measured by quantitative PCR as the ratio between the number of copies of the Wolbachia cidB gene and the Wolbachia cidB gene
, cidA expression was measured by quantitative PCR as the ratio between the Wolbachia cidA gene expression and the Wolbachia wsp gene expression. The colored dots represent the cidA expression level per wPip genome in a male and the red strips represent the average cidA expression level per wPip genome for ten males per MAL lines. Expression levels of cidA genes were not significantly different between the, S8 Fig. cidA expression level in the wPip strains infecting the four MAL lines
, cidB expression was measured by quantitative PCR as the ratio between the Wolbachia cidB gene expression and the Wolbachia wsp gene expression. The colored dots represent the cidB expression level per wPip genome in a male and the red strips represent the average cidB expression level per wPip genome for ten males per MAL lines. Expression levels of cidB genes were not significantly different between the, S9 Fig. cidB expression level in the wPip strains infecting the four MAL lines
, S10 Fig. cidA/cidB expression level in the wPip strains infecting the four MAL lines
, The colored dots represent the cidA/cidB expression level per wPip genome in a male and the red strips represent the average cidA/cidB expression per wPip genome for ten males per MAL lines. Letters represent the different statistical groups (i.e. means with the same letter are not significantly different). sous 40° : Rémi, Grand Yoann, cidA/cidB expression levels was measured by quantitative PCR as the ratio between the number of copies of the Wolbachia cidA gene and the Wolbachia cidB gene
pour avoir été à mes côtés pendant toute la thèse, pour avoir accepté que je te taquine sans jamais bouder, pour être venu bosser le samedi avec moi, pour m'avoir soutenu pendant les moments difficiles, pour toutes ces fois où on est allée courir en râlant sur la thèse ,
, Merci à tous les autres doctorants : Laura, Alexis, Quentin V, Quentin M (je travaille sur une recette de savon sans huile de palme :p )
, Coco pour ces
, Marianne pour toutes ces soirées et aprèms piscines jeux de société !
, Merci à tous les autres copains de Montpellier et d'ailleurs : Matthis, 2014.