, DQ362950-isolate Arg/2/02-Argentina-A1
, GQ888741-strain UY/18/06 1-Uruguay-A2a
, DQ362952-isolate Arg/3/00-Argentina-A2 A2a
, KC731491-strain HMPV/PUNE/NIV0927648/09-India-A2a
, JN604827-isolate FLA4882-Colombia-A2
, AY530095-isolate JPS03-240-Japan-1B
, , p.3331, 2013.
, , 2013.
, , p.5406, 2013.
, KC731524-strain HMPV/PUNE/NIV11442/11-India-A2b
, HQ864260-isolate E694-Cambodia-A2b
, AY848859-isolate RSA/23/02-South Africa-B1
, JX082178-isolate CQ1254-China-B1
, DQ393719-isolate Peru5-2003-Peru-B1
, DQ362954-isolate Arg/2/00-Argentina-B1
, AY296034-isolate NL/1/99-Netherlands-B1
, , 2013.
, KC731513-strain HMPV/PUNE/NIV111361/11-India-B1 B1
, DQ393720-isolate Peru6-2003-Peru-B2
, HQ864230-isolate E233-Cambodia-B2
,
, JN604816-isolate FLA8902-Nicaragua-B2
, AY296040-isolate NL/1/94-Netherlands-B2
,
Global, regional, and national causes of child mortality in 2000-13, with projections to inform post-2015 priorities: an updated systematic analysis, The Lancet, vol.385, pp.430-470, 2015. ,
Burden of Human Metapneumovirus Infection in Young Children, N. Engl. J. Med, vol.368, pp.633-676, 2013. ,
The Burden of Respiratory Syncytial Virus Infection in Young Children, N. Engl. J. Med, vol.360, pp.588-98, 2009. ,
Global burden of acute lower respiratory infections due to respiratory syncytial virus in young children: a systematic review and meta-analysis, Lancet, vol.375, pp.1545-55, 2010. ,
Human metapneumovirus: review of an important respiratory pathogen, Int. J. Infect. Dis. IJID Off. Publ. Int. Soc. Infect. Dis, vol.25, pp.45-52, 2014. ,
Human metapneumovirus in patients hospitalized with acute respiratory infections: A meta-analysis, J. Clin. Virol, vol.81, pp.68-77, 2016. ,
Order-Mononegavirales, Virus Taxon ,
URL : https://hal.archives-ouvertes.fr/hal-01911212
, , 2012.
A newly discovered human pneumovirus isolated from young children with respiratory tract disease, Nat. Med, vol.7, pp.719-743, 2001. ,
A newly discovered human pneumovirus isolated from young children with respiratory tract disease, J. Infect. Dis, vol.185, pp.719-743, 2001. ,
Analysis of the Genomic Sequence of a Human Metapneumovirus, Virology, vol.295, pp.119-151, 2002. ,
Genetic diversity between human metapneumovirus subgroups, Virology, vol.315, pp.1-9, 2003. ,
Viral entry mechanisms: the increasing diversity of paramyxovirus entry, FEBS J, vol.276, pp.7217-7244, 2009. ,
Antigenic Characterization of Respiratory Syncytial Virus Strains with Monoclonal Antibodies, J. Infect. Dis, vol.151, pp.626-659, 1985. ,
Two distinct subtypes of human respiratory syncytial virus, J. Gen. Virol, vol.66, pp.2111-2135, 1985. ,
Circulation patterns of genetically distinct group A and B strains of human respiratory syncytial virus in a community, J. Gen. Virol, vol.79, pp.2221-2230, 1998. ,
Circulation Patterns of Group A and B Human Respiratory Syncytial Virus Genotypes in 5 Communities in North America, J. Infect. Dis, vol.181, pp.1891-1897, 2000. ,
Molecular characterization of human respiratory syncytial virus, 20102011: identification of genotype ON1 and a new subgroup B genotype in Thailand, Arch. Virol, vol.159, pp.499-507, 2013. ,
Prevalence and genetic characterization of respiratory syncytial virus (RSV) in hospitalized children in Korea, Arch. Virol, vol.157, pp.1039-50, 2012. ,
Genetic Variation in Attachment Glycoprotein Genes of Human Respiratory Syncytial Virus Subgroups A and B in Children in Recent Five Consecutive Years, PLoS ONE, vol.8, 2013. ,
Genetic Variability of Human Respiratory Syncytial Virus A Strains Circulating in Ontario: A Novel Genotype with a 72 Nucleotide G Gene Duplication, PLoS ONE, vol.7, 2012. ,
Circulation of a novel human respiratory syncytial virus Group B genotype during the 2014-2015 season in Catalonia (Spain), Clin. Microbiol. Infect. Off. Publ. Eur. Soc. Clin. Microbiol. Infect. Dis, 2015. ,
Displacement of predominant respiratory syncytial virus genotypes in Malaysia between, Infect. Genet. Evol. J. Mol. Epidemiol. Evol. Genet. Infect. Dis, vol.14, pp.357-60, 1989. ,
Molecular characterization of human respiratory syncytial virus subtype B: A novel genotype of subtype B circulating in China, J. Med. Virol, vol.87, pp.1-9, 2015. ,
Major changes in the G protein of human respiratory syncytial virus isolates introduced by a duplication of 60 nucleotides, J. Gen. Virol, vol.84, pp.3115-3135, 2003. ,
Genetic diversity and molecular epidemiology of respiratory syncytial virus over four consecutive seasons in South Africa: identification of new subgroup A and B genotypes, J. Gen. Virol, vol.82, pp.2117-2141, 2001. ,
Genetic Variability of Human Respiratory Syncytial Virus Group B in Panama Reveals a Novel Genotype BA14, J. Med. Virol, 2017. ,
Molecular Epidemiology of Human Metapneumovirus in Riyadh Province, Saudi Arabia, J. Mol. Microbiol. Biotechnol, vol.26, pp.414-435, 2016. ,
Genetic diversity, seasonality and transmission network of human metapneumovirus: identification of a unique sub-lineage of the fusion and attachment genes, vol.6, 2016. ,
Human metapneumovirus epidemiological and evolutionary patterns in Coastal Kenya, BMC Infect. Dis, vol.16, p.301, 2016. ,
Genetic variability of human metapneumovirus amongst an all ages population in Cambodia between, Infect. Genet. Evol. J. Mol. Epidemiol. Evol. Genet. Infect. Dis, vol.15, pp.43-52, 2007. ,
URL : https://hal.archives-ouvertes.fr/pasteur-00808148
, Novel Human Metapneumovirus Sublineage. Emerg. Infect. Dis, vol.12, pp.147-50, 2006.
Circulation of HRSV in Belgium: From Multiple Genotype Circulation to Prolonged Circulation of Predominant Genotypes, PLoS ONE, vol.8, 2013. ,
Emerging Genotypes of Human Respiratory Syncytial Virus Subgroup A among Patients in Japan, J. Clin. Microbiol, vol.47, pp.2475-82, 2009. ,
Subgroup Prevalence and Genotype Circulation Patterns of Human Respiratory Syncytial Virus in Belgium during Ten Successive Epidemic Seasons, J. Clin. Microbiol, vol.45, pp.3022-3052, 2007. ,
Genetic Relatedness of Infecting and Reinfecting Respiratory Syncytial Virus Strains Identified in a Birth Cohort From Rural Kenya, J. Infect. Dis, vol.206, pp.1532-1573, 2012. ,
Circulation of Human Respiratory Syncytial Virus Strains Among Hospitalized Children with Acute Lower Respiratory Infection in Malaysia, Evol. Bioinforma. Online, vol.9, pp.151-61, 2013. ,
Genotype circulation pattern of human respiratory syncytial virus in Iran, Infect. Genet. Evol. J. Mol. Epidemiol. Evol. Genet. Infect. Dis, vol.22, pp.130-133, 2014. ,
Molecular Epidemiology and Disease Severity of Human Respiratory Syncytial Virus in Vietnam, PLoS ONE, 2013. ,
Recovery from infants with respiratory illness of a virus related to chimpanzee coryza agent (CCA). I. Isolation, properties and characterization, Am. J. Hyg, vol.66, pp.281-90, 1957. ,
Viral Etiologies of Acute Respiratory Infections among Hospitalized Vietnamese Children, 2004. ,
, PLoS, vol.6, 2011.
Respiratory viruses in children hospitalized for acute lower respiratory tract infection in Ghana, Virol. J, vol.9, p.78, 2012. ,
Respiratory Viral Coinfections Identified by a 10-Plex Real-Time Reverse-Transcription Polymerase Chain Reaction Assay in Patients Hospitalized With Severe Acute Respiratory Illness-South Africa, J. Infect. Dis, vol.206, pp.159-65, 2009. ,
Viral Etiology and Clinical Profiles of Children with Severe Acute Respiratory Infections in China, PLoS ONE, vol.8, 2013. ,
Respiratory virus infections in hospitalized children and adults in Lao PDR, Influenza Other Respir. Viruses, vol.7, pp.1070-1078, 2013. ,
URL : https://hal.archives-ouvertes.fr/pasteur-00863482
High Seroprevalence of Neutralizing Capacity against Human Metapneumovirus in All Age Groups Studied in Bonn, Germany. Clin. Vaccine Immunol. CVI, vol.17, pp.481-485, 2010. ,
Epidemiology of respiratory syncytial virus in children in Cyprus during three consecutive winter seasons (2010-2013): age distribution, seasonality and association between prevalent genotypes and disease severity, Epidemiol. Infect, vol.142, pp.2406-2411, 2014. ,
Genetic Variability of Group A Human Respiratory Syncytial Virus Strains Circulating in Germany from 1998 to, J. Clin. Microbiol, vol.47, pp.1800-1810, 2007. ,
Novel Respiratory Syncytial Virus (RSV) Genotype ON1 Predominates in Germany during Winter Season 2012-13, PLoS ONE, vol.9, 2014. ,
A Study of the Genetic Variability of Human Respiratory Syncytial Virus (HRSV) in Cambodia Reveals the Existence of a New HRSV Group B Genotype?, J. Clin. Microbiol, vol.49, pp.3504-3517, 2011. ,
Respiratory Syncytial Virus Infection and Bronchiolitis, Pediatr. Rev, vol.35, 2014. ,
An outbreak of severe respiratory tract infection due to human metapneumovirus in a long-term care facility for the elderly in Oregon, J. Clin. Virol. Off. Publ. Pan Am. Soc. Clin. Virol, vol.53, pp.171-174, 2012. ,
Severe metapneumovirus infections among immunocompetent and immunocompromised patients admitted to hospital with respiratory infection, J. Med. Virol, vol.85, pp.530-536, 2013. ,
Humane metapneumovirus (HMPV) associated pulmonary infections in immunocompromised adults-Initial CT findings, disease course and comparison to respiratory-syncytial-virus (RSV) induced pulmonary infections, Eur. J. Radiol, vol.81, pp.4173-4181, 2012. ,
An outbreak of severe respiratory tract infection caused by human metapneumovirus in a residential care facility for elderly in, Euro Surveill. Bull. Eur. Sur Mal. Transm. Eur. Commun. Dis. Bull, vol.17, 2010. ,
Rates of Hospitalizations for Respiratory Syncytial Virus, Human Metapneumovirus, and Influenza Virus in Older Adults, J. Infect. Dis, vol.206, pp.56-62, 2012. ,
Genetic Variability of Human Metapneumovirus Infection: Evidence of a Shift in Viral Genotype without a Change in Illness, J. Infect. Dis, vol.193, pp.396-403, 2006. ,
Human Metapneumovirus: Insights from a Ten-Year Molecular and Epidemiological Analysis in Germany, PLoS ONE, vol.9, 2014. ,
, Human Metapneumovirus, vol.12, pp.1263-1269, 2001.
Co-circulation of genetically distinct human metapneumovirus and human bocavirus strains in young children with respiratory tract infections in Italy, J. Med. Virol, vol.83, pp.156-64, 2011. ,
URL : https://hal.archives-ouvertes.fr/hal-00599787
Co-circulating genetically divergent A2 human metapneumovirus strains among children in southern Taiwan, Arch. Virol, vol.153, pp.2207-2220, 2008. ,
Detection and Genetic Diversity of Human Metapneumovirus in Hospitalized Children with Acute Respiratory Infections in Southwest China, J. Clin. Microbiol, vol.50, pp.2714-2723, 2012. ,
Ten years of human metapneumovirus research, J. Clin. Virol. Off. Publ. Pan Am. Soc. Clin. Virol, vol.53, pp.97-105, 2012. ,
Genotypes of respiratory syncytial virus group B identified in Uruguay, Arch. Virol, vol.150, pp.603-612, 2004. ,
Natural History of Human Respiratory Syncytial Virus Inferred from Phylogenetic Analysis of the Attachment (G) Glycoprotein with a 60-Nucleotide Duplication, J. Virol, vol.80, pp.975-84, 2006. ,
New Genotypes within Respiratory Syncytial Virus Group B Genotype BA in Niigata, Japan. J. Clin. Microbiol, vol.48, pp.3423-3430, 2010. ,
Characterization of Human Metapneumoviruses Isolated from Patients in North America, J. Infect. Dis, vol.185, pp.1660-1663, 2002. ,
Antigenic and Genetic Variability of Human Metapneumoviruses, Emerg. Infect. Dis, vol.10, pp.658-66, 2004. ,
Genetic Variability of the G Glycoprotein Gene of Human Metapneumovirus, J. Clin. Microbiol, vol.42, pp.3532-3539, 2004. ,
Characterization of a Prefusion-Specific Antibody That Recognizes a Quaternary, Cleavage-Dependent Epitope on the RSV Fusion Glycoprotein, PLoS Pathog, vol.11, 2015. ,
A Recombinant Respiratory Syncytial Virus Vaccine Candidate Attenuated by a Low-Fusion F Protein Is Immunogenic and Protective against Challenge in Cotton Rats, J. Virol, vol.90, pp.7508-7526, 2016. ,
The Comparative Genomics of Human Respiratory Syncytial Virus Subgroups A and B: Genetic Variability and Molecular Evolutionary Dynamics, J. Virol, vol.87, pp.8213-8239, 2013. ,
Molecular evolution of human respiratory syncytial virus attachment glycoprotein (G) gene of new genotype ON1 and ancestor NA1, Infect. Genet. Evol. J. Mol. Epidemiol. Evol. Genet. Infect. Dis, vol.28, pp.183-91, 2014. ,
Analysis of linear epitopes recognised by the primary human antibody response to a variable region of the attachment (G) protein of respiratory syncytial virus, J. Med. Virol, vol.10, pp.297-304, 1997. ,
Site-directed serology with synthetic peptides representing the large glycoprotein G of respiratory syncytial virus, Proc. Natl. Acad. Sci. U. S. A, vol.84, pp.6572-6578, 1987. ,
Positive Selection Results in Frequent Reversible Amino Acid Replacements in the G Protein Gene of Human Respiratory Syncytial Virus, PLoS Pathog, vol.5, 2009. ,
Evolutionary dynamics of human and avian metapneumoviruses, J. Gen. Virol, vol.89, pp.2933-2975, 2008. ,
Genetic diversity and evolution of human metapneumovirus fusion protein over twenty years, Virol. J, vol.6, p.138, 2009. ,
Molecular epidemiology and molecular characterization of respiratory syncytial viruses at a tertiary care university hospital in Catalonia (Spain) during the 2013-2014 season, J. Clin. Virol, vol.66, pp.27-32, 2015. ,
Identification of group B respiratory syncytial viruses that lack the 60-nucleotide duplication after six consecutive epidemics of total BA dominance at coastal Kenya. Influenza Other Respir, Viruses, vol.7, pp.1008-1020, 2013. ,
Sequence variability of the respiratory syncytial virus (RSV) fusion gene among contemporary and historical genotypes of RSV/A and RSV/B. PloS One, vol.12, p.175792, 2017. ,
Population-Based Incidence of Human Metapneumovirus in Hospitalized Children, J. Infect. Dis, vol.201, pp.1890-1898, 2010. ,
Epidemiological and phylogenic study of human metapneumovirus infections during three consecutive outbreaks in Normandy, France, J. Med. Virol, vol.83, pp.517-541, 2011. ,
URL : https://hal.archives-ouvertes.fr/hal-00610724
The genetic variability of glycoproteins among respiratory syncytial virus subtype A in China between, Infect. Genet. Evol, vol.27, pp.339-386, 2009. ,
Genetic diversity in the G protein gene of group A human respiratory syncytial viruses circulating in Riyadh, Saudi Arabia, Arch. Virol, vol.159, pp.73-81, 2013. ,
A study of the genetic variability of human respiratory syncytial virus in Croatia, J. Med. Virol, vol.84, pp.1985-92, 2006. ,
Genetic variability of human respiratory syncytial virus in Pune, Western India, Infect. Genet. Evol, vol.20, pp.369-77, 2013. ,
Replacement and Positive Evolution of Subtype A and B Respiratory Syncytial Virus G-Protein Genotypes From 19972012 in South Africa, J. Infect. Dis, vol.208, pp.227-264, 2013. ,
Viral respiratory infections in hospitalized and community control children in Alaska, J. Med. Virol, vol.82, pp.1282-90, 2010. ,
Association between Respiratory Syncytial Virus Hospitalizations in Infants and Respiratory Sequelae: Systematic Review and Meta-Analysis, Pediatr. Infect. Dis. J, vol.1, 2013. ,
Human metapneumovirus infections in hospitalized children, Emerg. Infect. Dis, vol.9, pp.634-641, 2003. ,
Human metapneumovirus and lower respiratory tract disease in otherwise healthy infants and children, N. Engl. J. Med, vol.350, pp.443-450, 2004. ,
Molecular Analysis of Human Metapneumovirus Detected in Patients with Lower Respiratory Tract Infection in Upper Egypt, Int. J. Microbiol, 2014. ,
Phylogenetic and Phylodynamic Analyses of Human Metapneumovirus in Buenos Aires (Argentina) for a Three-Year Period, PLoS ONE, 2009. ,
Molecular epidemiology of human metapneumovirus (hMPV) in Cambodia, BMC Proc, vol.5, p.71, 2011. ,
, Subcommittee on Diagnosis and Management of Bronchiolitis. Diagnosis and Management of Bronchiolitis, Pediatrics, vol.118, pp.1774-93, 2006.
Prevalence of human metapneumovirus in children with acute lower respiratory infection in Changsha, China. J. Med. Virol, vol.85, pp.546-53, 2013. ,
Fatal human metapneumovirus infection following allogeneic hematopoietic stem cell transplantation, Transpl. Infect. Dis, vol.15, pp.97-101, 2013. ,
DOI : 10.1111/tid.12074
The epidemiology of respiratory syncytial virus lower respiratory tract infections in children less than 5 years of age in Indonesia, Pediatr. Infect. Dis. J, vol.30, pp.778-84, 2011. ,
Respiratory syncytial virus infections in hospitalized infants: Association between viral load, virus subgroup, and disease severity, J. Med. Virol, vol.79, pp.1951-1959, 2007. ,
Disease severity and viral load are correlated in infants with primary respiratory syncytial virus infection in the community, J. Med. Virol, vol.82, pp.1266-71, 2010. ,
Human metapneumovirus infection in young children hospitalized with respiratory tract disease, Pediatr. Infect. Dis. J, vol.25, pp.354-359, 2006. ,
Koch's postulates fulfilled for SARS virus, Nature, vol.423, pp.240-240, 2003. ,
DOI : 10.1038/423240a
Prednisolone reduces recurrent wheezing after a first wheezing episode associated with rhinovirus infection or eczema, J. Allergy Clin. Immunol, vol.119, pp.570-575, 2007. ,
DOI : 10.1016/j.jaci.2006.11.003
Diagnosis and testing in bronchiolitis: A systematic review, Arch. Pediatr. Adolesc. Med, vol.158, pp.119-145, 2004. ,
Metagenomic sequencing for virus identification in a public-health setting, J. Gen. Virol, vol.91, pp.2846-56, 2010. ,
Impact of a Rapid Respiratory Panel Test on Patient Outcomes, Arch. Pathol. Lab. Med, vol.139, pp.636-677, 2014. ,
Detection of respiratory viruses using non-molecular based methods, J. Clin. Virol. Off. Publ. Pan Am. Soc. Clin. Virol, vol.40, issue.1, pp.11-14, 2007. ,
Characterization of hospital and community-acquired respiratory syncytial virus in children with severe lower respiratory tract infections in Ho Chi Minh City, Influenza Other Respir. Viruses, vol.9, pp.110-119, 2010. ,
Comparison of the FilmArray Respiratory Panel and Prodesse Real-Time PCR Assays for Detection of Respiratory Pathogens, J. Clin. Microbiol, vol.49, pp.4083-4091, 2011. ,
Comparison of Luminex NxTAG Respiratory Pathogen Panel and xTAG Respiratory Viral Panel FAST Version 2 for the Detection of Respiratory Viruses, Ann. Lab. Med, vol.37, pp.267-71, 2017. ,
Comparison of the FilmArray assay and in-house real-time PCR for detection of respiratory infection, Scand. J. Infect. Dis, vol.46, pp.897-901, 2014. ,
Comparison of xTAG respiratory virus panel and Verigene Respiratory Virus Plus for detecting influenza virus and respiratory syncytial virus, J. Clin. Lab. Anal, vol.29, pp.116-137, 2015. ,
Evaluation of the BioFire FilmArray Respiratory Panel and the GenMark eSensor Respiratory Viral Panel on Lower Respiratory Tract Specimens, J. Clin. Microbiol, vol.52, pp.288-90, 2014. ,
Evaluation of Four Commercial Multiplex Molecular Tests for the Diagnosis of Acute Respiratory Infections, PLOS ONE, vol.10, p.130378, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01202047
Evaluation of the PrimerDesign TM genesig realtime reverse transcription-polymerase chain reaction assay and the INFINITI® Respiratory Viral Panel Plus assay for the detection of human metapneumovirus in Kuwait, Diagn. Microbiol. Infect. Dis, vol.72, pp.358-62, 2012. ,
Comparison of the fast track diagnostics respiratory 21 and Seegene Allplex multiplex polymerase chain reaction assays for the detection of respiratory viruses, Br. J. Biomed. Sci, vol.74, pp.85-94, 2017. ,
Screening of respiratory pathogens by Respiratory Multi Well System (MWS) r-gene TM assay in hospitalized patients, New Microbiol, vol.37, pp.231-237, 2014. ,
Improved Detection of Respiratory Pathogens by Use of High-Quality Sputum with TaqMan Array Card Technology, J. Clin. Microbiol, vol.55, pp.110-131, 2017. ,
A microfluidic chipcompatible bioassay based on single-molecule detection with high sensitivity and multiplexing, Lab. Chip, vol.10, pp.843-51, 2010. ,
Reverse transcription polymerase chain reaction and electrospray ionization mass spectrometry for identifying acute viral upper respiratory tract infections, Diagn. Microbiol. Infect. Dis, vol.69, pp.179-86, 2011. ,
Identification and classification of respiratory syncytial virus (RSV) strains by surface-enhanced Raman spectroscopy and multivariate statistical techniques, Anal. Bioanal. Chem, vol.390, pp.1551-1556, 2008. ,
, M des A étrangères et du D. Géographie et histoire
Étrangères Dév. Int, 2016. ,
, Etude multi-échelles des précipitations et du couvert végétal au Cameroun : analyses spatiales, tendances temporelles, facteurs climatiques et anthropiques de variabilité du NDVI
, , 2011.
Fleuves et Rivières du Cameroun. Ministère de l'enseignement supérieur et de la recherche scientifique au Cameroun, 1986. ,
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Res, vol.22, pp.4673-80, 1994. ,
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0, Mol. Biol. Evol, vol.30, pp.2725-2734, 2013. ,
Prediction, conservation analysis, and structural characterization of mammalian mucin-type O-glycosylation sites, Glycobiology, vol.15, pp.153-64, 2005. ,
Not So Different After All: A Comparison of Methods for Detecting Amino Acid Sites Under Selection, Mol. Biol. Evol, vol.22, pp.1208-1230, 2005. ,
, Adaptive Evolution Server @ Datamonkey.org, 2015.
Frequent detection of viral coinfection in children hospitalized with acute respiratory tract infection using a real-time polymerase chain reaction, Pediatr. Infect. Dis. J, vol.27, pp.589-94, 2008. ,
The role of respiratory viral infections among children hospitalized for community-acquired pneumonia in a developing country, Pediatr. Infect. Dis. J, vol.27, pp.939-980, 2008. ,
Respiratory Viruses in Hospitalized Children with Influenza-Like Illness during the H1n1, PLoS ONE, vol.7, 2009. ,
Respiratory viruses from hospitalized children with severe pneumonia in the Philippines, BMC Infect. Dis, vol.12, p.267, 2012. ,
Viral pathogens associated with acute respiratory infections in central vietnamese children, Pediatr. Infect. Dis. J, vol.29, pp.75-82, 2010. ,
Epidemiology and seasonality of respiratory viral infections in hospitalized children in Kuala Lumpur, Malaysia: a retrospective study of 27 years, BMC Pediatr, vol.12, 2012. ,
Broad respiratory virus detection in infants hospitalized for bronchiolitis by use of a multiplex RT-PCR DNA microarray system, J. Med. Virol, vol.84, pp.979-85, 2012. ,
Human bocavirus and other respiratory viral infections in a 2-year cohort of hospitalized children, J. Med. Virol, vol.84, pp.99-108, 2012. ,
Etiology and epidemiology of viral pneumonia among hospitalized children in rural Mozambique: a malaria endemic area with high prevalence of human immunodeficiency virus, Pediatr. Infect. Dis. J, vol.30, pp.39-44, 2011. ,
Adenoviruses in the immunocompromised host, Clin. Microbiol. Rev, vol.5, pp.262-74, 1992. ,
Rates of respiratory virusassociated hospitalization in children aged <5 years in rural northern India, J. Infect, vol.68, pp.281-290, 2014. ,
Viral etiology of acute respiratory tract infections in children presenting to hospital: role of polymerase chain reaction and demonstration of multiple infections, Pediatr. Infect. Dis. J, vol.23, pp.1003-1010, 2004. ,
RNA viruses in young Nepalese children hospitalized with severe pneumonia, Pediatr. Infect. Dis. J, vol.30, pp.1032-1038, 2011. ,
Human bocavirus-the first 5 years, Rev. Med. Virol, vol.22, pp.46-64, 2012. ,
Viral etiology of lower respiratory tract infections in hospitalized children in Mexico, Pediatr. Infect. Dis. J, vol.23, pp.118-141, 2004. ,
Lower respiratory tract infection in hospitalized children, Respirol. Carlton Vic, vol.8, pp.83-92, 2003. ,
Human metapneumovirus infection among children hospitalized with acute respiratory illness, Emerg Infect Dis, vol.10, pp.700-705, 2004. ,
Human Metapneumovirus Infection in the Canadian Population, J. Clin. Microbiol, vol.41, pp.4642-4648, 2003. ,
Human metapneumovirus strains circulating in Latin America, Arch. Virol, vol.157, pp.563-571, 2011. ,
Outbreak of Human Metapneumovirus Infection in Norwegian Children, Pediatr. Infect. Dis. J, vol.23, issue.103, pp.436-476, 2004. ,
Prevalence and Clinical Symptoms of Human Metapneumovirus Infection in Hospitalized Patients, J. Infect. Dis, vol.188, pp.1571-1578, 2003. ,
Human metapneumovirus in children tested at a tertiary-care hospital, J. Infect. Dis, vol.190, pp.20-26, 2004. ,
Children with respiratory disease associated with metapneumovirus in Hong Kong, Emerg Infect Dis, 2003. ,
Circulation of a novel human respiratory syncytial virus group B genotype during the 2014-2015 season in Catalonia (Spain), Clin. Microbiol. Infect. Off. Publ. Eur. Soc. Clin. Microbiol. Infect. Dis, 2015. ,
Genotype variability and clinical features of human metapneumovirus isolated from Korean children, J. Mol. Diagn. JMD, vol.14, pp.61-65, 2007. ,
Dual Infection of Infants by Human Metapneumovirus and Human Respiratory Syncytial Virus Is Strongly Associated with Severe Bronchiolitis, J. Infect. Dis, vol.191, pp.382-388, 2005. ,
Absence of human metapneumovirus co-infection in cases of severe respiratory syncytial virus infection, Pediatr. Pulmonol, vol.41, pp.872-876, 2006. ,
Viral etiology and seasonality of influenza-like illness in Gabon, BMC Infect. Dis, vol.14, p.373, 2010. ,
Role of human metapneumovirus, human coronavirus NL63 and human bocavirus in infants and young children with acute wheezing, J. Med. Virol, vol.80, pp.906-918, 2008. ,
Development of real-time RT-PCR for detection of human metapneumovirus and genetic analysis of circulating strains, Arch. Virol, vol.159, pp.217-242, 2009. ,
Genetic Diversity of Human Metapneumovirus over 4 Consecutive Years in Australia, J. Infect. Dis, vol.193, pp.1630-1633, 2006. ,
Molecular detection and genetic variability of human metapneumovirus in Uruguay, J. Med. Virol, vol.82, pp.861-866, 2010. ,
High Genetic Diversity of the Attachment (G) Protein of Human Metapneumovirus, J. Clin. Microbiol, vol.42, pp.3406-3420, 2004. ,
Vaccine and mAb Snapshot-PATH Vaccine Resource Library, 2017. ,
Successive Respiratory Syncytial Virus Epidemics in Local Populations Arise from Multiple Variant Introductions, Providing Insights into Virus Persistence, J. Virol, vol.89, pp.11630-11672, 2015. ,
Epidemiology and Molecular Characterization of Human Respiratory Syncytial Virus in Senegal after Four Consecutive Years of Surveillance, PloS One, vol.11, p.157163, 2016. ,
Viral etiology of Severe Acute Respiratory Infections in hospitalized children in Cameroon, pp.2011-2013, 2016. ,
Risk factors of prolonged hospital stay in children with viral severe acute respiratory infections, J. Infect. Dev. Ctries, vol.8, pp.1285-93, 2014. ,
Viral etiology and seasonality of influenza-like illness in Gabon, BMC Infect. Dis, vol.14, p.373, 2010. ,
Severe acute respiratory infection in children in a densely populated urban slum in Kenya, BMC Infect. Dis, vol.15, 2007. ,
High rate of human bocavirus and adenovirus coinfection in hospitalized Israeli children, J. Clin. Microbiol, vol.46, pp.334-341, 2008. ,
Molecular typing and epidemiology profiles of human adenovirus infection among paediatric patients with severe acute respiratory infection in China, PloS One, vol.10, p.123234, 2015. ,
Severe Acute Respiratory Illness Deaths in Sub-Saharan Africa and the Role of Influenza: A Case Series From 8 ,
URL : https://hal.archives-ouvertes.fr/pasteur-01675405
, Countries. J. Infect. Dis, vol.212, pp.853-60, 2015.
, Virus Taxonomy. 9th Report of the International Committee on Taxonomy of Viruses, pp.125-141, 2011.
URL : https://hal.archives-ouvertes.fr/pasteur-01977366
Using the Whole-Genome Sequence To Characterize and Name Human Adenoviruses?, J. Virol, vol.85, pp.5701-5703, 2011. ,
Dramatic Decline of Respiratory Illness Among US Military Recruits After the Renewed Use of Adenovirus Vaccines, Clin. Infect. Dis, vol.59, pp.962-970, 2014. ,
New drug on the horizon for treating adenovirus, Expert Opin. Pharmacother, vol.0, pp.1-5, 2015. ,
An outbreak of adenovirus type 7 in a residential facility for severely disabled children, Pediatr. Infect. Dis. J, vol.30, pp.948-52, 2011. ,
Evaluating the performance of a rapid antigen test for the detection of influenza virus in clinical specimens from children in Cameroon, Influenza Other Respir. Viruses, vol.8, pp.131-135, 2014. ,
Molecular characterization of human adenovirus infection in Thailand, Virol. J, vol.10, p.193, 2009. ,
Real-Time Blood Plasma Polymerase Chain Reaction for Management of Disseminated Adenovirus Infection, Clin. Infect. Dis, vol.38, pp.45-52, 2004. ,
Real-Time Quantitative PCR Assays for Detection and Monitoring of Pathogenic Human Viruses in Immunosuppressed Pediatric Patients, J. Clin. Microbiol, vol.42, pp.5189-98, 2004. ,
Molecular identification of adenoviruses associated with respiratory infection in Egypt from, BMC Infect. Dis, vol.14, p.50, 2003. ,
A Molecular Epidemiology Survey of Respiratory Adenoviruses Circulating in Children Residing in Southern Palestine, PLoS ONE, vol.7, 2012. ,
High-Incidence of Human Adenoviral Co-Infections in Taiwan, PLoS ONE, vol.8, 2013. ,
Adenoviruses associated with acute respiratory diseases reported in Beijing from, PloS One, vol.10, p.121375, 2011. ,
Spread of Epidemic Keratoconjunctivitis Due to a Novel Serotype of Human Adenovirus in Japan, J. Clin. Microbiol, vol.47, pp.2678-2687, 2009. ,
New Adenovirus Species Found in a Patient Presenting with Gastroenteritis, J. Virol, vol.81, pp.5978-84, 2007. ,
Evidence of Molecular Evolution Driven by Recombination Events Influencing Tropism in a Novel Human Adenovirus that Causes Epidemic Keratoconjunctivitis, PLoS ONE, 2009. ,
Computational Analysis Identifies Human Adenovirus Type 55 as a Re-Emergent Acute Respiratory Disease Pathogen, J. Clin. Microbiol, vol.48, pp.991-994, 2010. ,
Temporal changes in respiratory adenovirus serotypes circulating in the greater Toronto area, Virol. J, vol.10, p.15, 2008. ,
Adenovirus Respiratory Tract Infections in Peru, Lynch JP, Fishbein M, Echavarria M. Adenovirus. Semin. Respir. Crit. Care Med, vol.7, pp.494-511, 2011. ,
Global and regional burden of hospital admissions for severe acute lower respiratory infections in young children in 2010: a systematic analysis, Lancet, vol.381, pp.1380-1390, 2013. ,
Viruses in community-acquired pneumonia in children aged less than 3 years old: high rate of viral coinfection, J Med Virol, vol.80, pp.1843-1849, 2008. ,
Global burden of acute lower respiratory infections due to respiratory syncytial virus in young children: a systematic review and meta-analysis, Lancet, vol.375, pp.1545-1555, 2010. ,
Viral etiology of hospitalized acute lower respiratory infections in children under 5 years of age-a systematic review and meta-analysis, Croat Med J, vol.54, pp.122-134, 2013. ,
Viral etiology of acute lower respiratory tract infections in hospitalized young children in Northern Taiwan, J Microbiol Immunol Infect, vol.44, pp.184-190, 2011. ,
Viral infections of the lower respiratory tract, Curr Infect Dis Rep, vol.14, pp.284-291, 2012. ,
Emerging respiratory agents: new viruses for old diseases?, J Clin Virol, vol.42, pp.233-243, 2008. ,
Cloning of a human parvovirus by molecular screening of respiratory tract samples, Proc Natl Acad Sci, vol.102, pp.12891-12896, 2005. ,
Use of a multiplex PCR/RT-PCR approach to assess the viral causes of influenza-like illnesses in cambodia during three consecutive dry seasons, J Med Virol, vol.82, pp.1762-1772, 2010. ,
URL : https://hal.archives-ouvertes.fr/pasteur-00808228
Advances in the laboratory diagnosis of viral respiratory disease, Pediatr Infect Dis J, vol.23, pp.6-10, 2004. ,
Circulation of human influenza viruses and emergence of Oseltamivir-resistant A(H1N1) viruses in Cameroon, Central Africa, BMC Infect Dis, vol.10, pp.1-5, 2010. ,
URL : https://hal.archives-ouvertes.fr/hal-00542166
Spatiotemporal circulation of influenza viruses in 5 african countries during 2008-2009: a collaborative study of the institut Pasteur International Network, J Infect Dis, vol.206, pp.5-13, 2012. ,
URL : https://hal.archives-ouvertes.fr/pasteur-00835730
Viral etiology of influenza-like illnesses in Cameroon, J Infect Dis, vol.206, pp.29-35, 2009. ,
,
, The Authors. Influenza and Other Respiratory Viruses Published by, 2016.
Strategy to enhance influenza surveillance worldwide, Emerg Infect Dis, vol.15, pp.1271-1278, 2009. ,
, CDC protocol of realtime RTPCR for swine flu influenza A (H1N1). Geneva, 2009.
The role of respiratory viral infections among children hospitalized for community-acquired pneumonia in a developing country, Pediatr Infect Dis J, vol.27, pp.939-941, 2008. ,
Respiratory viruses from hospitalized children with severe pneumonia in the Philippines, BMC Infect Dis, vol.12, p.267, 2012. ,
Respiratory viruses in hospitalized children with influenza-like illness during the H1n1, PLoS ONE, vol.7, pp.1-7, 2009. ,
Frequent detection of viral coinfection in children hospitalized with acute respiratory tract infection using a real-time polymerase chain reaction, Pediatr Infect Dis J, vol.27, pp.589-594, 2008. ,
Viral pathogens associated with acute respiratory infections in central vietnamese children, Pediatr Infect Dis J, vol.29, pp.75-77, 2009. ,
Respiratory viruses in children hospitalized for acute lower respiratory tract infection in Ghana, Virol J, vol.9, pp.1-8, 2012. ,
Epidemiology and seasonality of respiratory viral infections in hospitalized children in Kuala Lumpur, Malaysia: a retrospective study of 27 years, BMC Pediatr, vol.12, pp.1-9, 2012. ,
Viral etiology and clinical profiles of children with severe acute respiratory infections in China, PLoS ONE, vol.8, pp.1-10, 2013. ,
Viral respiratory infections in hospitalized and community control children in Alaska, J Med Virol, vol.82, pp.1282-1290, 2010. ,
Broad respiratory virus detection in infants hospitalized for bronchiolitis by use of a multiplex RT-PCR DNA microarray system, J Med Virol, vol.84, pp.979-985, 2012. ,
Human bocavirus and other respiratory viral infections in a 2-year cohort of hospitalized children, J Med Virol, vol.84, pp.99-108, 2012. ,
Respiratory virus infections in hospitalized children and adults in Lao PDR, Influenza Other Respir Viruses, vol.7, pp.1070-1078, 2013. ,
URL : https://hal.archives-ouvertes.fr/pasteur-00863482
Respiratory viral coinfections identified by a 10-plex real-time reverse-transcription polymerase chain reaction assay in patients hospitalized with severe acute respiratory illness-South Africa, J Infect Dis, vol.206, pp.159-165, 2009. ,
Etiology and Epidemiology of Viral Pneumonia Among Hospitalized Children in Rural Mozambique, Pediatr Infect Dis J, vol.30, pp.39-44, 2011. ,
Adenoviruses in the immunocompromised host, Clin Microbiol Rev, vol.5, pp.262-274, 1992. ,
Detection of new respiratory viruses in hospitalized infants with bronchiolitis: a three-year prospective study, Acta Paediatr, vol.99, pp.883-887, 2010. ,
Lower respiratory tract infection in hospitalized children, Respirology, vol.8, pp.83-89, 2003. ,
Viral etiology of lower respiratory tract infections in hospitalized children in Mexico, Pediatr Infect Dis J, vol.23, pp.118-123, 2004. ,
RNA viruses in young nepalese children hospitalized with severe pneumonia, Pediatr Infect Dis J, vol.30, pp.1032-1036, 2011. ,
Human bocavirus-the first 5 years, Rev Med Virol, vol.22, pp.46-64, 2012. ,
Viral etiologies of acute respiratory infections among hospitalized vietnamese children in Ho Chi Minh city, PLoS ONE, vol.6, pp.1-9, 2004. ,
Viral Etiology of Acute Respiratory Tract Infections in Children Presenting to Hospital, Pediatr Infect Dis J, vol.23, pp.1003-1007, 2004. ,
Rates of respiratory virusassociated hospitalization in children aged <5 years in rural northern India, J Infect, vol.13, pp.1-22, 2013. ,
Performance of diagnostic tests to detect respiratory viruses in older adults, Diagn Microbiol Infect Dis, vol.67, pp.246-250, 2010. ,
Detecting respiratory viruses in asymptomatic children, Pediatr Infect Dis J, vol.31, pp.1221-1226, 2012. ,
Viral and bacterial causes of severe acute respiratory illness among children aged less than 5 years in a high malaria prevalence area of western Kenya, Pediatr Infect Dis J, vol.32, pp.14-19, 2007. ,
Persistence of rhinovirus and enterovirus RNA after acute respiratory illness in children, J Med Virol, vol.72, pp.695-699, 2004. ,
, Viral etiology of SARI in Cameroon, pp.2011-2013
, The Authors. Influenza and Other Respiratory Viruses Published by, 2016.
Cloning of a human parvovirus by molecular screening of respiratory tract samples, Proc Natl Acad Sci USA, vol.102, pp.12891-12897, 2005. ,
A newly identified bocavirus species in human stool, J Infect Dis, vol.199, pp.196-200, 2009. ,
Human bocaviruses are highly diverse, dispersed, recombination prone, and prevalent in enteric infections, J Infect Dis, vol.201, pp.1633-1676, 2010. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01375294
A novel bocavirus associated with acute gastroenteritis in Australian children, PLoS Pathog, vol.5, p.1000391, 2009. ,
Human bocavirus-the first 5 years, Rev Med Virol, vol.22, pp.46-64, 2012. ,
Genetic variability of human metapneumo-and bocaviruses in children with respiratory tract infections. Influenza Other Respir Viruses, vol.8, pp.107-122, 2014. ,
Co-circulation of genetically distinct human metapneumovirus and human bocavirus strains in young children with respiratory tract infections in Italy, J Med Virol, vol.83, pp.156-64, 2011. ,
URL : https://hal.archives-ouvertes.fr/hal-00599787
Human metapneumovirus and human bocavirus associated with respiratory infection in Apulian population, Virology, vol.417, pp.64-70, 2011. ,
Detection of human bocavirus in hospitalised children, J Paediatr Child Health, vol.45, pp.149-53, 2009. ,
Epidemic and molecular evolution of human bocavirus in hospitalized children with acute respiratory tract infection, Eur J Clin Microbiol Infect Dis, vol.34, pp.75-81, 2015. ,
Human bocavirus in Pakistani children with gastroenteritis, J Med Virol, vol.87, pp.656-63, 2015. ,
Human bocavirus in children with acute respiratory infections in Vietnam, J Med Virol, vol.86, pp.988-94, 2014. ,
Human bocavirus isolated from children with acute respiratory tract infections in Korea, J Med Virol, vol.86, pp.2011-2019, 2010. ,
High prevalence of human bocavirus 1 in infants with lower acute respiratory tract disease in Argentina, Braz J Infect Dis, vol.16, pp.38-44, 2007. ,
Human bocavirus infections in hospitalized children and adults, Emerg Infect Dis, vol.14, pp.217-238, 2008. ,
Detection of human bocavirus in Canadian children in a 1-year study, J Clin Microbiol, vol.45, pp.610-613, 2007. ,
Human bocavirus infection in young children in the United States: molecular epidemiological profile and clinical characteristics of a newly emerging respiratory virus, J Infect Dis, vol.194, pp.1276-82, 2006. ,
Molecular detection and phylogenetic analysis of Kenyan human bocavirus isolates, J Infect Dev Ctries, vol.8, pp.221-228, 2014. ,
Role of human metapneumovirus, human coronavirus NL63 and human bocavirus in infants and young children with acute wheezing, J Med Virol, vol.80, pp.906-918, 2008. ,
Human bocavirus in hospitalized children, S Afr Emerg Infect Dis, vol.12, pp.1457-1465, 2006. ,
Viral etiology of severe acute respiratory infections in hospitalized children in Cameroon, Influenza Other Respir Viruses, vol.10, issue.5, pp.386-93, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-02367379
Detection of bocavirus in children suffering from acute respiratory tract infections in Saudi Arabia, PLoS ONE, vol.8, p.55500, 2013. ,
Phylogenetic analysis of human bocavirus isolated from children with acute respiratory illnesses and gastroenteritis in Iran, Scand J Infect Dis, vol.42, pp.598-603, 2010. ,
High rate of human bocavirus and adenovirus coinfection in hospitalized Israeli children, J Clin Microbiol, vol.46, pp.334-341, 2008. ,
Evidence of human coronavirus HKU1 and human bocavirus in Australian children, J Clin Virol, vol.35, pp.99-102, 2006. ,
MEGA6: molecular evolutionary genetics analysis version 6.0, Mol Biol Evol, vol.30, pp.2725-2734, 2013. ,
Global burden of acute lower respiratory infections due to respiratory syncytial virus in young children: a systematic review and meta-analysis, Lancet, vol.375, pp.1545-55, 2010. ,
The G glycoprotein of human respiratory syncytial viruses of subgroups A and B: extensive sequence divergence between antigenically related proteins, Proc. Natl. Acad. Sci. U. S. A, vol.84, pp.5625-5634, 1987. ,
Genetic diversity of the attachment protein of subgroup B respiratory syncytial viruses, J. Virol, vol.65, pp.5425-5459, 1991. ,
Molecular Characterization of Circulating Respiratory Syncytial Virus (RSV) Genotypes in Gilgit Baltistan Province of Pakistan during 2011-2012 Winter Season, PLoS ONE, vol.8, 2013. ,
A Study of the Genetic Variability of Human Respiratory Syncytial Virus (HRSV) in Cambodia Reveals the Existence of a New HRSV Group B Genotype?, J. Clin. Microbiol, vol.49, pp.3504-3517, 2011. ,
New Genotypes within Respiratory Syncytial Virus Group B Genotype BA in Niigata, Japan. J. Clin. Microbiol, vol.48, pp.3423-3430, 2010. ,
Evaluation of respiratory syncytial virus group A and B genotypes among nosocomial and community-acquired pediatric infections in southern Brazil, Virol. J, vol.11, p.36, 2014. ,
Epidemiological Changes of Respiratory Syncytial Virus (RSV) Infections in Israel, PLoS ONE ,
Displacement of predominant respiratory syncytial virus genotypes in Malaysia between, Infect. Genet. Evol. J. Mol. Epidemiol. Evol. Genet. Infect. Dis, vol.14, pp.357-60, 1989. ,
Molecular evolution of attachment glycoprotein (G) gene in human respiratory syncytial virus detected in Japan, Infect. Genet. Evol. J. Mol. Epidemiol. Evol. Genet. Infect. Dis, vol.18, pp.168-73, 2008. ,
Genetic characterization of human respiratory syncytial virus detected in hospitalized children in the Philippines from 2008 to 2012, J. Clin. Virol, vol.57, pp.59-65, 2013. ,
Novel Respiratory Syncytial Virus (RSV) Genotype ON1 Predominates in Germany during Winter Season 2012-13, PLoS ONE, vol.9, 2014. ,
Molecular Epidemiology and Disease Severity of Human Respiratory Syncytial Virus in Vietnam, PLoS ONE, vol.8, 2013. ,
Two distinct subtypes of human respiratory syncytial virus, J. Gen. Virol, vol.66, pp.2111-2135, 1985. ,
Circulation patterns of genetically distinct group A and B strains of human respiratory syncytial virus in a community, J. Gen. Virol, vol.79, pp.2221-2230, 1998. ,
Circulation Patterns of Group A and B Human Respiratory Syncytial Virus Genotypes in 5 Communities in North America, J. Infect. Dis, vol.181, pp.1891-1897, 2000. ,
Prevalence and genetic characterization of respiratory syncytial virus (RSV) in hospitalized children in Korea, Arch. Virol, vol.157, pp.1039-50, 2012. ,
Genetic Variation in Attachment Glycoprotein Genes of Human Respiratory Syncytial Virus Subgroups A and B in Children in Recent Five Consecutive Years, PLoS ONE, vol.8, 2013. ,
Genetic Variability of Human Respiratory Syncytial Virus A Strains Circulating in Ontario: A Novel Genotype with a 72 Nucleotide G Gene Duplication, PLoS ONE, vol.7, 2012. ,
Emerging Genotypes of Human Respiratory Syncytial Virus Subgroup A among Patients in Japan, J. Clin. Microbiol, vol.47, pp.2475-82, 2009. ,
Molecular characterization of human respiratory syncytial virus, 2010-2011: identification of genotype ON1 and a new subgroup B genotype in Thailand, Arch. Virol, vol.159, pp.499-507, 2013. ,
Genotypes of respiratory syncytial virus group B identified in Uruguay, Arch. Virol, vol.150, pp.603-612, 2004. ,
Circulation of a novel human respiratory syncytial virus Group B genotype during the 20142015 season in Catalonia (Spain), Clin. Microbiol. Infect. Off. Publ. Eur. Soc. Clin. Microbiol. Infect. Dis, 2015. ,
Molecular characterization of human respiratory syncytial virus subtype B: A novel genotype of subtype B circulating in China, J. Med. Virol, vol.87, pp.1-9, 2015. ,
Natural History of Human Respiratory Syncytial Virus Inferred from Phylogenetic Analysis of the Attachment (G) Glycoprotein with a 60-Nucleotide Duplication, J. Virol, vol.80, pp.975-84, 2006. ,
Major changes in the G protein of human respiratory syncytial virus isolates introduced by a duplication of 60 nucleotides, J. Gen. Virol, vol.84, pp.3115-3135, 2003. ,
Genetic Variability of Human Respiratory Syncytial Virus Group B in Panama Reveals a Novel Genotype BA14, J. Med. Virol, 2017. ,
Vaccine and mAb Snapshot-PATH Vaccine Resource Library ,
Successive Respiratory Syncytial Virus Epidemics in Local Populations Arise from Multiple Variant Introductions, Providing Insights into Virus Persistence, J. Virol, vol.89, pp.11630-11672, 2015. ,
Epidemiology and Molecular Characterization of Human Respiratory Syncytial Virus in Senegal after Four Consecutive Years of Surveillance, PloS One, vol.11, p.157163, 2016. ,
Viral Etiology of Influenza-Like Illnesses in Cameroon, J. Infect. Dis, vol.206, pp.29-35, 2009. ,
Viral etiology of Severe Acute Respiratory Infections in hospitalized children in Cameroon, pp.2011-2013, 2016. ,
A study of the genetic variability of human respiratory syncytial virus in Croatia, 2006. ,
, J. Med. Virol, vol.84, pp.1985-92, 2012.
, , p.4539, 2012.
, , p.4536, 2012.
, , p.4724, 2012.
, , p.4731, 2012.
, , p.4837, 2012.
, , p.4841, 2012.
, , p.4846, 2012.
, , p.4940, 2012.
, , p.4941, 2012.
, , p.4945, 2012.
, , p.5447, 2012.
, , p.5722, 2012.
, , p.4280, 2012.
, , p.5487, 2012.
, , p.4546, 2012.
, , p.5506, 2013.
, , 2013.
, , p.4772, 2012.
, , p.5226, 2013.
, , 2013.
, , 2013.
, , p.5229, 2013.
, , 2013.
, , 2013.
, , 2013.
, , 2012.
, , vol.5628, 2013.
, , 2013.
, , p.5401, 2013.
, , p.5939, 2012.
, , p.4835, 2012.
, , p.4733, 2012.
,
, AF348825-isolate SA0025-SAB-1
, AF348814-isolate SA99V470-GB3
,
, AY488794-isolate mon/1/99-URU1
, AY488801-isolate mon/4/01-SAB3
,
, AF348821-isolate SA99V800-SAB-2
, AY333364-strain BA4128/99B-BA-1
, , pp.20410-20411
, , pp.20265-20266
, AY488806-isolate mon/9, pp.1-2
, AY488803-isolate mon/6/01 G-URU2
, M17213-Ref strain CH18537-HRSV-B
, , 2013.
, , 2013.
, , 2013.
, , p.5906, 2013.
, , 2013.
, , p.4732, 2012.
,
, , 2011.
, , 2011.
,
,
,
,
,
, , 1961.
, AF233918-isolate NY20-GA-6
, AF233901-isolate AL19452-2-GA-6
, AF233912-isolate MO15-GA5
, AF233918-isolate NY20-GA-6
, AF233901-isolate AL19452-2-GA-6
, , 1961.
,
,
, AF233915-isolate MO55-GA-2
, JX568890-isolate POA/20C/10-Brazil-NA1
, , 2013.
,
, JX131641-strain Riyadh 83/2009-Saudi Arabia-NA1
, , 2011.
, , 2011.
,
,
,
,
, , p.5906, 2013.
, , 2013.
, , 2013.
,
, , 2013.
, , p.4732, 2012.
,
, , p.4546, 2012.
, , pp.4-004
, , vol.5628, 2013.
,
,
, , p.5401, 2013.
, , p.5939, 2012.
, , p.4835, 2012.
, , p.4772, 2012.
, , p.4733, 2012.
,
, AF348825-isolate SA0025-SAB-1
,
, AY333364-strain BA4128/99B-BA-1
, AY488794-isolate mon/1/99-URU1
, AY488801-isolate mon/4/01-SAB3
,
, AF348821-isolate SA99V800-SAB-2
, AF348814-isolate SA99V470-GB3
, , pp.20410-20411
, , pp.20265-20266
, AY488803-isolate mon/6/01 G-URU2
, AY488806-isolate mon/9, pp.1-2
, M17213-Ref strain CH18537-HRSV-B M11486-Ref Strain A2-1961, p.155
, Article 1 en preparation Title: Molecular characterization of human adenovirus associated with acute respiratory infections in Cameroon from 2011 to 2014. Summary Background: Human adenoviruses (HAdVs) cause a wide range of diseases, including respiratory infections worldwide. Studies on the molecular epidemiology of HAdVs are limited in Cameroon. Objective: To document the different serotypes HAdV circulating in Cameroon in children with acute respiratory infections
, The HAdV was typed by amplification and sequencing of partial hexon gene and a real-time PCR. Results: HAdV interspecies Co-infections were 22.2%. Six species of HAdV (Mastadenovirus A to F) were detected with B (78.5%) and C (34.8%) being the predominant strains, Methods: Nasopharyngeal swabs were collected from 219 HAdV positive children under 15 years from, vol.7, 2011.
Risk factors of prolonged hospital stay in children with viral severe acute respiratory infections, J. Infect. Dev. Ctries, vol.8, pp.1285-93, 2014. ,
Viral etiology and seasonality of influenza-like illness in Gabon, BMC Infect. Dis, vol.14, p.373, 2010. ,
Severe acute respiratory infection in children in a densely populated urban slum in Kenya, BMC Infect. Dis, 2007. ,
High rate of human bocavirus and adenovirus coinfection in hospitalized Israeli children, J. Clin. Microbiol, vol.46, pp.334-341, 2008. ,
Molecular typing and epidemiology profiles of human adenovirus infection among paediatric patients with severe acute respiratory infection in China, PloS One, vol.10, p.123234, 2015. ,
Severe Acute Respiratory Illness Deaths in Sub-Saharan Africa and the Role of Influenza: A Case Series From 8 ,
URL : https://hal.archives-ouvertes.fr/pasteur-01675405
, Countries. J. Infect. Dis, vol.212, pp.853-60, 2015.
, Virus Taxonomy. 9th Report of the International Committee on Taxonomy of Viruses, pp.125-166, 2011.
URL : https://hal.archives-ouvertes.fr/pasteur-01977366
Using the Whole-Genome Sequence To Characterize and Name Human Adenoviruses?, J. Virol, vol.85, pp.5701-5703, 2011. ,
Dramatic Decline of Respiratory Illness Among US Military Recruits After the Renewed Use of Adenovirus Vaccines, Clin. Infect. Dis, vol.59, pp.962-970, 2014. ,
New drug on the horizon for treating adenovirus, Expert Opin. Pharmacother, vol.0, pp.1-5, 2015. ,
An outbreak of adenovirus type 7 in a residential facility for severely disabled children, Pediatr. Infect. Dis. J, vol.30, pp.948-52, 2011. ,
Viral etiology of Severe Acute Respiratory Infections in hospitalized children in Cameroon, pp.2011-2013, 2016. ,
Evaluating the performance of a rapid antigen test for the detection of influenza virus in clinical specimens from children in Cameroon, Influenza Other Respir. Viruses, vol.8, pp.131-135, 2014. ,
Molecular characterization of human adenovirus infection in Thailand, Virol. J, vol.10, p.193, 2009. ,
Real-Time Blood Plasma Polymerase Chain Reaction for Management of Disseminated Adenovirus Infection, Clin. Infect. Dis, vol.38, pp.45-52, 2004. ,
Real-Time Quantitative PCR Assays for Detection and Monitoring of Pathogenic Human Viruses in Immunosuppressed Pediatric Patients, J. Clin. Microbiol, vol.42, pp.5189-98, 2004. ,
Molecular identification of adenoviruses associated with respiratory infection in Egypt from, BMC Infect. Dis, vol.14, p.50, 2003. ,
A Molecular Epidemiology Survey of Respiratory Adenoviruses Circulating in Children Residing in Southern Palestine, PLoS ONE, vol.7, 2012. ,
High-Incidence of Human Adenoviral Co-Infections in Taiwan, PLoS ONE, vol.8, 2013. ,
Adenoviruses associated with acute respiratory diseases reported in Beijing from, PloS One, vol.10, p.121375, 2011. ,
Spread of Epidemic Keratoconjunctivitis Due to a Novel Serotype of Human Adenovirus in Japan, J. Clin. Microbiol, vol.47, pp.2678-2687, 2009. ,
New Adenovirus Species Found in a Patient Presenting with Gastroenteritis, J. Virol, vol.81, pp.5978-84, 2007. ,
Evidence of Molecular Evolution Driven by Recombination Events Influencing Tropism in a Novel Human Adenovirus that Causes Epidemic Keratoconjunctivitis, PLoS ONE, 2009. ,
Computational Analysis Identifies Human Adenovirus Type 55 as a Re-Emergent Acute Respiratory Disease Pathogen, J. Clin. Microbiol, vol.48, pp.991-994, 2010. ,
Temporal changes in respiratory adenovirus serotypes circulating in the greater Toronto area, Virol. J, vol.10, 2008. ,
Adenovirus Respiratory Tract Infections in Peru, PLoS ONE, vol.7, 2012. ,
, Adenovirus. Semin. Respir. Crit. Care Med, vol.32, pp.494-511, 2011.
Computational analysis and identification of an emergent human adenovirus pathogen implicated in a respiratory fatality, Virology, vol.409, pp.141-148, 2011. ,
Adenovirus infections in hospitalized patients in Israel: epidemiology and molecular characterization, J. Clin. Microbiol, vol.49, 2011. ,
, DQ393829.1-HAdV-D49
, AB330100.1-HAdV-D19
, EF153473.1-HAdV-D48
, AC 000006.1-HAdV-D17
, FJ404771.1-HAdV-D22
, AB562586.1-HAdV-D15
, GQ384080.1-HAdV-D36
, AB448767.1-HAdV-D8
, AB330131.1-HAdV-B50
, AY803294.1-HAdV-B14
, AY737797.1-HAdV-B34