, Appl. Environ. Microbiol, vol.73, pp.3528-3535, 2007.
Krill Excretion Boosts Microbial Activity in the Southern Ocean, PLoS ONE, vol.9, p.89391, 2014. ,
Hot spot of N 2 fixation in the western tropical South Pacific pleads for a spatial decoupling between N 2 fixation and denitrification, Proc. Natl. Acad. Sci, vol.114, pp.2800-2801, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-01621724
Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient, ISME J, vol.7, pp.210-220, 2013. ,
Biomass and primary productivity of the cyanobacterium Trichodesmium spp. in the tropical N Atlantic Ocean, Deep Sea Res. Part Oceanogr. Res. Pap, vol.51, pp.173-203, 2004. ,
The Fate of a Southwest Pacific Bloom: Gauging the impact of submesoscale vs. mesoscale circulation on biological gradients in the subtropics, Biogeosciences Discuss, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-01634495
UCHIME improves sensitivity and speed of chimera detection, Bioinformatics, vol.27, pp.2194-2200, 2011. ,
The stoichiometry of consumer-driven nutrient recycling: theory,observations, and consequences, Ecology, vol.80, pp.735-751, 1999. ,
A study of plankton dynamics and nutrient cycling in the central gyre of the North Pacific Ocean, Limnol. Oceanogr, vol.18, pp.534-551, 1973. ,
Changes in community composition during dilution cultures of marine bacterioplankton as assessed by flow cytometric and molecular biological techniques, Environ. Microbiol, vol.2, issue.2, pp.191-201, 2000. ,
Nitrogen regeneration by the subtropical marine copepod Eucalanus pileatus, J. Plankton Res, vol.4, pp.725-734, 1982. ,
SAR11 Bacteria: The Most Abundant Plankton in the Oceans, Annu. Rev. Mar. Sci, vol.9, pp.231-255, 2017. ,
Digital zooplankton image analysis using the ZooScan integrated system, J. Plankton Res, vol.32, issue.3, pp.285-303, 2010. ,
Dissolved organic nitrogen dynamics in coastal waters and the effect of copepods, J. Exp. Mar. Biol. Ecol, vol.244, pp.219-238, 2000. ,
A simple and precise method for measuring ammonium in marine and freshwater ecosystems, Can. J. Fish. Aquat. Sci, vol.56, pp.1801-1808, 1999. ,
Contribution and pathways of diazotroph-derived nitrogen to zooplankton during the VAHINE mesocosm experiment in the oligotrophic New Caledonia lagoon, Biogeosciences, vol.13, pp.3131-3145, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-01443627
Size-fractionated mesozooplankton biomass, metabolism and grazing along a 50 N-30 S transect of the Atlantic Ocean, J. Plankton Res, vol.26, pp.1301-1313, 2004. ,
Uptake and release of dissolved organic phosphorus by representatives of a coastal marine ecosystem, Limnol Ocean, vol.9, pp.224-234, 1964. ,
The role of nitrogen fixation in biogeochemical cycling in the subtropical North Pacific Ocean, Nature, vol.388, pp.533-538, 1997. ,
Changes in bacterial diversity in response to dissolved organic matter supply in a continuous culture experiment, Aquat. Microb. Ecol, vol.69, pp.157-168, 2013. ,
Nitrospina-like bacteria are the main drivers of nitrite oxidation in the seasonal upwelling area of the Eastern South Pacific (Central Chile ?36°S): Nitriteoxidizing bacteria in the seasonal upwelling system off Concepcion, Environ. Microbiol. Rep, vol.6, pp.565-573, 2014. ,
Enumeration and cell cycle analysis of natural populations of marine picoplankton by flow cytometry using the nucleic acid stain SYBR Green I, Appl. Environ. Microbiol, vol.63, pp.186-193, 1997. ,
Effects of food nitrogen content and concentration on the forms of nitrogen excreted by the calanoid copepod, Acartia tonsa, J. Exp. Mar. Biol. Ecol, vol.359, pp.11-17, 2008. ,
Sloppy feeding in marine copepods: prey-size-dependent production of dissolved organic carbon, J. Plankton Res, vol.27, pp.27-35, 2004. ,
Production of dissolved organic carbon by sloppy feeding in the copepods Acartia tonsa, Centropages typicus, and Temora longicornis, Limnol. Oceanogr, vol.52, pp.79-84, 2007. ,
, Phosphate availability and the ultimate control of new nitrogen input by nitrogen fixation in the tropical Pacific Ocean, 2008.
URL : https://hal.archives-ouvertes.fr/hal-00330336
Phosphorus dynamics in cultures and natural populations of Trichodesmium spp, Mar. Ecol. Prog. Ser, vol.239, pp.45-55, 2002. ,
Ingestion of the cyanobacterium Trichodesmium spp. by pelagic harpacticoid copepods Macrosetella, Miracia and Oculosetella, Hydrobiologia, vol.292, pp.235-240, 1994. ,
Ingestion of 15 N 2-labelled Trichodesmium spp. and ammonium regeneration by the harpacticoid copepod Macrosetella gracilis, Mar. Biol, vol.125, pp.89-96, 1996. ,
The Rare Bacterial Biosphere, Annu. Rev. Mar. Sci, vol.4, pp.449-466, 2012. ,
Zooplankton activity fueling the microbial loop: differential growth response of bacteria from oligotrophic and eutrophic waters, Limnol. Oceanogr, vol.37, pp.1087-1092, 1992. ,
Improvement of the wet-oxidation procedure for simultaneous determination of particulate organic nitrogen and phosphorus collected on filters, Mar. Ecol.-Prog. Ser, vol.105, pp.203-203, 1994. ,
Influence of cladoceran grazing activity on dissolved organic matter, enzymatic hydrolysis and bacterial growth, J. Plankton Res, vol.23, pp.1249-1261, 2001. ,
Effects of diet on release of dissolved organic and inorganic nutrients by the copepod Acartia tonsa, Mar. Ecol. Prog. Ser, vol.386, pp.147-161, 2009. ,
The relative importance of sloppy feeding, excretion, and fecal pellet leaching in the release of dissolved carbon and nitrogen by Acartia tonsa copepods, J. Exp. Mar. Biol. Ecol, vol.404, pp.47-56, 2011. ,
Phytoplankton species-specific release of dissolved free amino acids and their selective consumption by bacteria, Limnol. Oceanogr, vol.58, pp.1123-1135, 2013. ,
Respiration and Phosphorus Excretion in Some Marine Populations, Ecology, vol.46, pp.877-881, 1965. ,
Introducing mothur: Open-Source, PlatformIndependent, Community-Supported Software for Describing and Comparing Microbial Communities, Appl. Environ. Microbiol, vol.75, pp.7537-7541, 2009. ,
Dynamics of dissolved organic nitrogen, Biogeochemestry of marine dissolved organic matter, pp.128-213, 2014. ,
Zooplankton and the Ocean Carbon Cycle, Annu. Rev. Mar. Sci, vol.9, pp.413-444, 2017. ,
Zooplankton vertical migration and the active transport of dissolved organic and inorganic carbon in the Sargasso Sea, Deep Sea Res. Part Oceanogr. Res. Pap, vol.47, pp.137-158, 2000. ,
Zooplankton vertical migration and the active transport of dissolved organic and inorganic nitrogen in the Sargasso Sea, Deep Sea Res. Part Oceanogr. Res. Pap, vol.49, pp.1445-1461, 2002. ,
Nitrogen consumption and metabolism in marine zooplankton, Nitrogen in the marine environment. Academic, pp.1135-1196, 2008. ,
Distribution and drivers of symbiotic and free-living diazotrophic cyanobacteria in the Western Tropical South Pacific, Biogeosciences Discuss, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-02024264
Planktonic grazers are a potentially important source of marine dissolved organic carbon, Limnol. Oceanogr, vol.42, pp.1364-1374, 1997. ,
Copepod feeding stimulates bacterioplankton activities in a low phosphorus system, Aquat. Biol, vol.2, pp.131-141, 2008. ,
Nitrogen excretion by copepods and its effect on ammonia-oxidizing communities from a coastal upwelling zone, Limnol. Oceanogr, 2017. ,
Bacterial growth response to copepod grazing in aquatic ecosystems, J. Mar. Biol. Assoc. UK, vol.87, p.667, 2007. ,
Relationships between zooplankton displacement volume, wet weight, dry weight, and carbon, Fish. Bull, vol.73, issue.4, pp.777-786, 1975. ,
Experimental studies on the feeding and reproduction of Calanoides patagoniensis (Copepoda, Calanoid) in a southern upwelling ecosystem of the Humboldt Current, Mar. Environ. Res, vol.91, pp.26-33, 2013. ,
Excretion of ammonia by zooplankton and its potential contribution to nitrogen requirements for primary production in the Catalan Sea, Mar. Biol, vol.119, pp.69-76, 1994. ,
The role of arctic zooplankton in biogeochemical cycles: respiration and excretion of ammonia and phosphate during summer, Polar Biol, vol.33, pp.1719-1731, 2010. ,
Importance of heterotrophic bacterial assimilation of ammonium and nitrate in the Barents Sea during summer, J Marine Syst, vol.38, pp.93-108, 2002. ,
Effect of Natural Sunlight on Bacterial Activity and Differential Sensitivity of Natural Bacterioplankton Groups in Northwestern Mediterranean Coastal Waters, Appl. Environ. Microbiol, vol.72, pp.5806-5813, 2006. ,
Krill Excretion Boosts Microbial Activity in the Southern Ocean, PLoS ONE, vol.9, p.89391, 2014. ,
Marine microorganism and global nutrient cycles, Nature, issue.15, p.437, 2005. ,
Enhancement of anammox by the excretion of diel vertical migrators, Proc. Natl. Acad. Sci, vol.111, pp.15653-15658, 2014. ,
Nitrogen excretion by marine zooplankton, pp.385-409, 1983. ,
Changes in bacterial community metabolism and composition during the degradation of dissolved organic matter from the jellyfish Aurelia aurita in a Mediterranean coastal lagoon, Environ. Sci. Pollut. Res, vol.22, pp.13638-13653, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01103187
Hot spot of N2 fixation in the western tropical South Pacific pleads for a spatial decoupling between N2 fixation and denitrification, Proc. Natl. Acad. Sci, vol.114, pp.2800-2801, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-01621724
Inorganic and organic nitrogen uptake by phytoplankton and heterotrophic bacteria in the stratified Mid-Atlantic Bight, Estuar. Coast. Shelf Sci, vol.88, pp.429-441, 2010. ,
DON as a source of bioavailable nitrogen for phytoplankton, Biogeosciences, vol.4, pp.283-296, 2007. ,
URL : https://hal.archives-ouvertes.fr/hal-00297614
Mesozooplankton influences on the microbial food web: direct and indirect trophic interactions in the oligotrophic open ocean, Limnol. Oceanogr, vol.44, pp.1370-1380, 1999. ,
, Mesozooplankton structure and functioning across the WesternTropical South Pacific Ocean, 2017.
, DOM source, sinks, reactivity and budgets. InHansell D. and Carlson C, pp.128-213, 2015.
Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient, ISME J, vol.7, pp.210-220, 2013. ,
Sources of urea in arctic seas: zooplankton metabolism, Mar. Ecol. Prog. Ser, vol.179, pp.41-54, 1999. ,
Natural assemblages of marine Proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low-and high-molecularweight dissolved organic matter, Appl. Environ. Microbiol, vol.66, pp.1692-1697, 2000. ,
Phosphate transfer between microbial size-fraction in Villefranche Bay (N. W. Mediterranean Sea), France in autumn 1992, OPHELIA, vol.41, pp.71-85, 1995. ,
Uptake of new and regenerated forms of nitrogen in primary productivity, Limnology and Oceanography, vol.12, pp.196-206, 1967. ,
The structure and functioning of the coastal upwelling system off central/southern Chile, Prog. Oceanogr, vol.75, pp.343-347, 2007. ,
Seasonal and inter-annual variation of mesozooplankton in the coastal upwelling zone off central-southern Chile, Prog. Oceanogr, vol.75, pp.470-485, 2007. ,
Zooplankton associated with the oxygen minimum zone system in the northern upwelling region of Chile during, Deep Sea Res. Part II Top. Stud. Oceanogr, vol.56, pp.1083-1094, 2000. ,
Assimilation and regeneration of inorganic nitrogen in a coastal upwelling system: ammonium and nitrate utilization, Mar. Ecol. Prog. Ser, vol.451, pp.1-14, 2012. ,
Changes in community composition during dilution cultures of marine bacterioplankton as assessed by flow cytometric and molecular biological techniques, Environ. Microbiol, vol.2, issue.2, pp.191-201, 2000. ,
Temporal variability and phylogenetic characterization of planktonic anammox bacteria in the coastal upwelling ecosystem off central Chile, Prog. Oceanogr, pp.110-120, 2012. ,
Nitrogen regeneration by the subtropical marine copepod Eucalanus pileatus, J. Plankton Res, vol.4, pp.725-734, 1982. ,
The microbiome of North Sea copepods, Helgol. Mar. Res, vol.67, pp.757-773, 2013. ,
SAR11 Bacteria: The Most Abundant Plankton in the Oceans, Annu. Rev. Mar. Sci, vol.9, pp.231-255, 2017. ,
Bacterial diversity associated with freshwater zooplankton, Environ. Microbiol. Rep, vol.1, pp.50-55, 2009. ,
, ICES Zooplankton Methodology Manual, p.684, 2000.
A global estimation of mesozooplankton ammonium excretion in the open ocean, J. Plankton Res, vol.30, pp.577-585, 2008. ,
Patterns of copepod diversity in the Chilean coastal upwelling system, Deep Sea Res. Part II Top. Stud. Oceanogr, vol.57, pp.2089-2097, 2010. ,
Metabolic rates of epipelagic marine copepods as a function of body mass and temperature, Mar. Biol, vol.139, pp.587-596, 2001. ,
Uptake and release of dissolved organic phosphorus by representatives of a coastal marine ecosystem. Limnol Ocean, vol.9, pp.224-234, 1964. ,
Diet composition and quality for Calanus finmarchicus egg production and hatching success off south-west Iceland, Marine Biology, vol.140, pp.1195-1206, 2002. ,
Ammonium excretion and oxygen respiration of tropical copepods and euphausiids exposed to oxygen minimum zone conditions, Biogeosciences Discuss, vol.12, pp.17329-17366, 2015. ,
Introduction to organic geochemistry, 2005. ,
Changes in bacterial diversity in response to dissolved organic matter supply in a continuous culture experiment, Aquat. Microb. Ecol, vol.69, pp.157-168, 2013. ,
Net zooplankton and the biological pump: a comparison between the oligotrophie and mesotrophic equatorial Pacific, 1997. ,
Algal-bacterial competition for phosphorus from dissolved DNA, ATP, and orthophosphate in a mesocosm experiment, Limnol. Oceanogr, vol.52, p.1407, 2007. ,
Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea, Proc. Natl. Acad. Sci, vol.107, pp.16420-16427, 2010. ,
Nitrogen excretion by the calanoid copepod Acartia tonsa: results of mesocosm experiments, J. Plankton Res, vol.20, pp.1767-1780, 1998. ,
Effects of food nitrogen content and concentration on the forms of nitrogen excreted by the calanoid copepod, Acartia tonsa, J. Exp. Mar. Biol. Ecol, vol.359, pp.11-17, 2008. ,
Effects of grazer and substrate amendments on nutrient and plankton dynamics in estuarine enclosures, Aquat. Microb. Ecol, vol.12, pp.251-261, 1997. ,
Ammonium cycling under a strong oxygen gradient associated with the Oxygen Minimum Zone off northern Chile (? 23 S), Mar Ecol Prog Ser, vol.288, pp.35-43, 2005. ,
Potential contribution of planktonic components to ammonium cycling in the coastal area off central-southern Chile during non-upwelling conditions, Prog. Oceanogr, pp.43-49, 2012. ,
Dissolved inorganic and organic phosphorus uptake in Trichodesmium and the microbial community: The importance of phosphorus ester in the Sargasso Sea, Limnol. Oceanogr, vol.55, pp.1390-1399, 2010. ,
The Oceanic Phosphorus Cycle, Chem. Rev, vol.107, pp.563-576, 2007. ,
Nitrogen excretion by mesozooplankton in a coastal upwelling area: Seasonal trends and implications for biological production, J. Exp. Mar. Biol. Ecol, vol.406, pp.116-124, 2011. ,
Excretion of phosphate and soluble organic phosphorus compounds by zooplankton, Limnol. Oceanogr, vol.8, pp.50-55, 1963. ,
Biomass and abundance, ICES Zooplankton Metodology Manual, pp.83-174, 2000. ,
Source of the 70-Day Mesoscale Eddy Variability in the Coral Sea and the North Fiji Basin, J. Phys. Oceanogr, vol.39, issue.2, pp.404-420, 2009. ,
Influence of cladoceran grazing activity on dissolved organic matter, enzymatic hydrolysis and bacterial growth, J. Plankton Res, vol.23, pp.1249-1261, 2001. ,
Why dissolved organic matter: DOC in ancient oceans and past climate change, Biogeochemistry of Marine Dissolved Organic Matter, pp.128-213, 2015. ,
Effects of diet on release of dissolved organic and inorganic nutrients by the copepod Acartia tonsa, Mar. Ecol. Prog. Ser, vol.386, pp.147-161, 2009. ,
The relative importance of sloppy feeding, excretion, and fecal pellet leaching in the release of dissolved carbon and nitrogen by Acartia tonsa copepods, J. Exp. Mar. Biol. Ecol, vol.404, pp.47-56, 2011. ,
Use of phytoplankton-derived dissolved organic carbon by different types of bacterioplankton: Use of phytoplankton-derived DOC by bacterioplankton, Environ. Microbiol, vol.14, pp.2348-2360, 2012. ,
Phytoplankton species-specific release of dissolved free amino acids and their selective consumption by bacteria, Limnol. Oceanogr, vol.58, pp.1123-1135, 2013. ,
Respiration and Phosphorus Excretion in Some Marine Populations, Ecology, vol.46, pp.877-881, 1965. ,
Hypoxia Tolerance and Metabolic Suppression in Oxygen Minimum Zone Euphausiids: Implications for Ocean Deoxygenation and Biogeochemical Cycles, Integr. Comp. Biol, vol.56, pp.510-523, 2016. ,
Biogeochemistry of Marine Dissolved Organic Matter, pp.128-213, 2015. ,
The role of zooplankton in the regeneration of nitrogen in a coastal upwelling system off northwest, Africa. Deep-Sea Res, vol.24, pp.49-56, 1977. ,
Coastal upwelling and seasonal cycles that influence the water column over the continental shelf off central Chile, Prog. Oceanogr, vol.75, pp.363-382, 2007. ,
Emerging patterns of marine nitrogen fixation, Nature Reviews Microbiology, vol.9, pp.499-508, 2011. ,
Zooplankton and the Ocean Carbon Cycle, Annu. Rev. Mar. Sci, vol.9, pp.413-444, 2017. ,
Zooplankton vertical migration and the active transport of dissolved organic and inorganic carbon in the Sargasso Sea, Deep Sea Res. Part Oceanogr. Res. Pap, vol.47, pp.137-158, 2000. ,
Zooplankton vertical migration and the active transport of dissolved organic and inorganic nitrogen in the Sargasso Sea, Deep Sea Res. Part Oceanogr. Res. Pap, vol.49, pp.1445-1461, 2002. ,
Nitrogen consumption and metabolism in marine zooplankton, Nitrogen in the marine environment. Academic, pp.1135-1196, 2008. ,
Planktonic grazers are a potentially important source of marine dissolved organic carbon, Limnol. Oceanogr, vol.42, pp.1364-1374, 1997. ,
Linkage between crustacean zooplankton and aquatic bacteria, Aquat. Microb. Ecol, vol.61, pp.261-277, 2010. ,
Jellyfish modulate bacterial dynamic and community structure, PLoS One, vol.7, p.39274, 2012. ,
Microbial transformation of jellyfish organic matter affects the nitrogen cycle in the marine water column-A Black Sea case study, J. Exp. Mar. Biol. Ecol, vol.475, pp.19-30, 2016. ,
Copepod feeding stimulates bacterioplankton activities in a low phosphorus system, Aquat. Biol, vol.2, pp.131-141, 2008. ,
Fixation and preservation of molluscan zooplankton, Zooplankton fixation and preservation, pp.290-300, 1976. ,
Phytoplankton food quality determines time windows for successful zooplankton reproductive pulses, Ecology, vol.87, pp.2992-2999, 2006. ,
URL : https://hal.archives-ouvertes.fr/hal-00358474
Bacterial growth response to copepod grazing in aquatic ecosystems, J. Mar. Biol. Assoc. UK, vol.87, p.667, 2007. ,
Net and gross incorporation of nitrogen by marine copepods fed on 15N-labelled diatoms: Methodology and trophic studies, J. Exp. Mar. Biol. Ecol, vol.352, pp.295-305, 2007. ,
URL : https://hal.archives-ouvertes.fr/hal-00482361
Use of Inorganic and Organic Nitrogen by Synechococcus spp. and Diatoms on the West Florida Shelf as Measured Using Stable Isotope Probing, Appl. Environ. Microbiol, vol.75, pp.6662-6670, 2009. ,
Influence of decomposing jellyfish on the sediment oxygen demand and nutrient dynamics, Hydrobiologia, vol.616, pp.151-160, 2009. ,
The significance of nitrification for oceanic new production, Nature, vol.447, pp.999-1002, 2007. ,
, Nitrogen Cycling in the Ocean: New Perspectives on Processes and Paradigms, vol.68, pp.1015-1024, 2002.
Differential microbial uptake of dissolved amino acids and amino sugars in surface waters of the Atlantic Ocean, J. Plankton Res, vol.30, pp.211-220, 2007. ,
URL : https://hal.archives-ouvertes.fr/hal-00528831