O. Aburto-oropeza, E. Ezcurra, G. Danemann, V. Valdez, J. Murray et al., Mangroves in the Gulf of California increase fishery yields, Proceedings of the National Academy of Sciences, pp.10456-10459, 2008.
DOI : 10.1023/A:1005493625658

N. Alexandris, B. Chatenoux, L. Lopez-torres, P. Peduzzi, . Unep et al., Monitoring mangrove restoration from space Reef Fishes of Bali, Indonesia. Bali Marine Rapid Assessment Program Present state and future of the world's mangrove forests, Environmental Conservation, vol.29, pp.15-68, 2002.

D. M. Alongi, Paradigm shifts in mangrove biology, 2009.

&. Brinson and M. M. , Coastal Wetlands: An Integrated Ecosystem Approach, pp.615-640

D. M. Alongi, Carbon payments for mangrove conservation: ecosystem constraints and uncertainties of sequestration potential, Environmental Science & Policy, vol.14, issue.4, pp.462-470, 2011.
DOI : 10.1016/j.envsci.2011.02.004

T. Asaeda, A. Barnuevo, K. Sanjaya, M. D. Fortes, Y. Kanesaka et al., Mangrove plantation over a limestone reef ??? Good for the ecology?, Estuarine, Coastal and Shelf Science, vol.173, pp.57-64, 2016.
DOI : 10.1016/j.ecss.2016.02.017

A. Bannari, D. Morin, F. Bonn, and A. R. Huete, A review of vegetation indices, Remote Sensing Reviews, vol.43, issue.1-2, pp.95-120, 1995.
DOI : 10.1007/BF00036048

E. B. Barbier, The protective service of mangrove ecosystems: A review of valuation methods, Marine Pollution Bulletin, vol.109, issue.2, pp.676-681, 2016.
DOI : 10.1016/j.marpolbul.2016.01.033

E. B. Barbier, S. D. Hacker, C. Kennedy, E. W. Koch, A. C. Stier et al., The value of estuarine and coastal ecosystem services, Ecological Monographs, vol.81, issue.2, pp.169-193, 2011.
DOI : 10.1890/ES10-00101.1

A. Bouchez, N. Pascault, C. Chardon, M. Bouvy, P. Cecchi et al., Mangrove microbial diversity and the impact of trophic contamination, Marine Pollution Bulletin, vol.66, issue.1-2, pp.39-46, 2012.
DOI : 10.1016/j.marpolbul.2012.11.015

URL : https://hal.archives-ouvertes.fr/hal-00956925

S. R. Carpenter, H. A. Mooney, J. Agard, D. Capistrano, R. S. Defries et al., Science for managing ecosystem services: Beyond the Millennium Ecosystem Assessment, Proceedings of the National Academy of Sciences, pp.1305-1312, 2009.
DOI : 10.1073/pnas.0702288104

F. S. Chapin, . Iii, S. R. Carpenter, G. P. Kofinas, C. Folke et al., Ecosystem stewardship: sustainability strategies for a rapidly changing planet, Trends in Ecology & Evolution, pp.241-249, 2010.
DOI : 10.1016/j.tree.2009.10.008

URL : https://dash.harvard.edu/bitstream/handle/1/9774650/Clark_EcosystemStewardship.pdf?sequence=1

S. Chaudhary, A. Mcgregor, D. Houston, and N. Chettri, The evolution of ecosystem services: A time series and discourse-centered analysis, Environmental Science & Policy, vol.54, pp.25-34, 2015.
DOI : 10.1016/j.envsci.2015.04.025

E. T. Choong, R. S. Wirakusumah, and S. S. Achmadi, Mangrove forest resources in Indonesia, Forest Ecology and Management, vol.33, issue.34, pp.33-34, 1990.
DOI : 10.1016/0378-1127(90)90183-C

P. Christie, K. Lowry, A. T. White, E. G. Oracion, L. Sievanen et al., Key findings from a multidisciplinary examination of integrated coastal management process sustainability, Ocean & Coastal Management, vol.48, issue.3-6, pp.468-483, 2005.
DOI : 10.1016/j.ocecoaman.2005.04.006

J. R. Clark, Integrated management of coastal zones. In, FAO Fisheries Technical Paper, 1992.

R. Costanza, R. Arge, R. De-groot, S. Farber, M. Grasso et al., The value of the world's ecosystem services and natural capital, Nature, vol.387, issue.6630, pp.253-260, 1997.
DOI : 10.1038/387253a0

C. Creighton, A. J. Hobday, and G. T. Pecl, Adapting Management of Marine Environments to a Changing Climate: A Checklist to Guide Reform and Assess Progress, Ecosystems, vol.28, issue.8, pp.187-219, 2016.
DOI : 10.1016/j.gloenvcha.2013.12.002

G. C. Daily, S. Polasky, J. Goldstein, P. M. Kareiva, H. A. Mooney et al., Ecosystem services in decision making: time to deliver, Frontiers in Ecology and the Environment, pp.21-28, 2009.
DOI : 10.1126/science.7455683

URL : http://onlinelibrary.wiley.com/doi/10.1890/080025/pdf

P. E. Dale, J. M. Knight, and P. G. Dwyer, Mangrove rehabilitation: a review focusing on ecological and institutional issues, Wetlands Ecology and Management, vol.55, issue.2???3, pp.587-604, 2014.
DOI : 10.1016/S1002-0160(11)60191-4

N. C. Duke, M. C. Ball, and J. C. Ellison, Factors Influencing Biodiversity and Distributional Gradients in Mangroves, Global Ecology and Biogeography Letters, vol.7, issue.1, pp.27-47, 1998.
DOI : 10.2307/2997695

URL : https://eprints.utas.edu.au/8301/1/8301.pdf

E. Dutrieux, C. Proisy, F. Fromard, R. Walcker, M. Ilman et al., Mangrove restoration in the vicinity of oil and gas facilities: lessons learnt from a large scale project Vulnerability assessment of mangroves to climate change and sea-level rise impacts, 2014 SPE Conference on Health, Safety, and Environment, pp.115-137, 2014.

J. C. Ellison, P. L. Erftemeijer, and R. R. Lewis, Climate Change Vulnerability Assessment and Adaptation Planning for Mangrove Systems Planting mangroves on intertidal mudflats: habitat restoration or habitat conversion? In, ECOTONE VIII Seminar " Enhancing Coastal Ecosystems Restoration for the 21st Century, World Wildlife Fund (WWF), 2000.

I. C. Feller, C. E. Lovelock, U. Berger, K. L. Mckee, S. B. Joye et al., Biocomplexity in Mangrove Ecosystems, Annual Review of Marine Science, vol.2, issue.1, pp.395-417, 2010.
DOI : 10.1146/annurev.marine.010908.163809

C. D. Field, Rehabilitation of Mangrove Ecosystems: An Overview, Marine Pollution Bulletin, vol.37, issue.8-12, p.37, 1999.
DOI : 10.1016/S0025-326X(99)00106-X

D. A. Friess, S. Y. Lee, and J. H. Primavera, Turning the tide on mangrove loss, Marine Pollution Bulletin, vol.109, issue.2, pp.673-675, 2016.
DOI : 10.1016/j.marpolbul.2016.06.085

F. Fromard, A. Gardel, C. Proisy, E. J. Anthony, and R. Walcker, Human threats and climate change impacts on mangrove ecosystem. In, Our Common Future Under Climate Change, COP21 International Scientific Conference 3D modeling of satellite spectral images, radiation budget and energy budget of urban landscapes, Meteorology and Atmospheric Physics, pp.187-207, 2008.

A. J. Gilbert and R. Janssen, Use of environmental functions to communicate the values of a mangrove ecosystem under different management regimes, Ecological Economics, vol.25, issue.3, pp.323-346, 1998.
DOI : 10.1016/S0921-8009(97)00064-5

C. Giri, E. Ochieng, L. L. Tieszen, Z. Zhu, A. Singh et al., Status and distribution of mangrove forests of the world using earth observation satellite data, Global Ecology and Biogeography, vol.5, issue.1-2, pp.154-159, 2011.
DOI : 10.1029/153GM18

A. L. Gordon, Oceanography of the Indonesian Seas and Their Throughflow, Oceanography, vol.18, issue.4, pp.14-27, 2005.
DOI : 10.5670/oceanog.2005.01

A. L. Gordon and R. A. Fine, Pathways of water between the Pacific and Indian oceans in the Indonesian seas, Nature, vol.379, issue.6561, pp.146-149, 1996.
DOI : 10.1038/379146a0

N. F. Gusmawati, C. Zhi, B. Soulard, N. Selmaoui-folcher, and H. Lemonnier, Aquaculture ponds precise mapping in Perancak Estuary, Journal of Coastal Research, 2016.
DOI : 10.2112/si75-128.1

A. Huete, K. Didan, T. Miura, E. P. Rodriguez, X. Gao et al., Overview of the radiometric and biophysical performance of the MODIS vegetation indices, Remote Sensing of Environment, vol.83, issue.1-2, pp.195-213, 2002.
DOI : 10.1016/S0034-4257(02)00096-2

A. R. Huete, K. Didan, Y. E. Shimabukuro, P. Ratana, S. R. Saleska et al., Amazon rainforests green-up with sunlight in dry season, Geophysical Research Letters, vol.94, issue.D20, p.6405, 2006.
DOI : 10.1007/s004680050157

URL : http://onlinelibrary.wiley.com/doi/10.1029/2005GL025583/pdf

C. L. Huffard, M. V. Erdmann, and T. R. Gunawan, Geographic Priorities for Marine Biodiversity Conservation in Indonesia: Ministry of Marine Affairs and Fisheries and Marine Protected Areas Governance Program, 2012.

M. Ilman, P. Dargusch, and P. Dart, A historical analysis of the drivers of loss and degradation of Indonesia???s mangroves, Land Use Policy, vol.54, pp.448-459, 2016.
DOI : 10.1016/j.landusepol.2016.03.010

A. D. Irving, S. D. Connell, B. D. Russell, M. Jia, Z. Wang et al., Restoring Coastal Plants to Improve Global Carbon Storage: Reaping What We Sow Landsat-Based Estimation of Mangrove Forest Loss and Restoration in Guangxi Province, by Human and Natural Factors. Ieee Journal of Selected Topics in Applied Earth Observations and Remote Sensing, pp.311-323, 2011.

M. Kamal and S. Phinn, Hyperspectral Data for Mangrove Species Mapping: A??Comparison of Pixel-Based and Object-Based Approach, Remote Sensing, vol.6, issue.12, pp.2222-2242, 2011.
DOI : 10.1016/0034-4257(91)90048-B

W. Koedsin and C. Vaiphasa, Discrimination of Tropical Mangroves at the Species Level with EO-1 Hyperion Data, Remote Sensing, vol.39, issue.7, pp.3562-3582, 2013.
DOI : 10.1109/36.905238

E. Kristensen, Mangrove crabs as ecosystem engineers; with emphasis on sediment processes, Journal of Sea Research, vol.59, issue.1-2, pp.30-43, 2008.
DOI : 10.1016/j.seares.2007.05.004

C. Kuenzer, A. Bluemel, S. Gebhardt, T. V. Quoc, and S. Dech, Remote Sensing of Mangrove Ecosystems: A Review, Remote Sensing, vol.1, issue.12, pp.878-928, 2011.
DOI : 10.1016/S0272-7714(02)00405-5

R. R. Lewis, Ecologically based goal setting in mangrove forest and tidal marsh restoration, Ecological Engineering, vol.15, issue.3-4, pp.191-198, 2000.
DOI : 10.1016/S0925-8574(00)00070-7

R. R. Lewis, Ecological engineering for successful management and restoration of mangrove forests, Ecological Engineering, vol.24, issue.4, pp.403-418, 2005.
DOI : 10.1016/j.ecoleng.2004.10.003

R. R. Lewis, E. C. Milbrandt, B. Brown, K. W. Krauss, A. S. Rovai et al., Stress in mangrove forests: Early detection and preemptive rehabilitation are essential for future successful worldwide mangrove forest management Five steps to successfull ecological restoration: Mangrove Action Project The ecology of mangroves, Marine Pollution Bulletin Lewis, Annual Review of Ecology and Systematics, vol.5, pp.39-64, 1974.

W. D. Mctaggart, HYDROLOGIC MANAGEMENT IN BALI, Singapore Journal of Tropical Geography, vol.57, issue.2, pp.96-111, 1989.
DOI : 10.1007/BF00891740

J. M. Montoya and D. Raffaelli, Climate change, biotic interactions and ecosystem services, Philosophical Transactions of the Royal Society B: Biological Sciences, vol.365, issue.5309, pp.2013-2018, 2010.
DOI : 10.1126/science.276.5309.122

URL : http://rstb.royalsocietypublishing.org/content/royptb/365/1549/2013.full.pdf

A. Olagoke, R. Peters, J. Vogt, C. Proisy, and U. Berger, Scaling mangrove tree responses and stand structure dynamics to environmental change: a simulation study The role of law and legal institutions in determining the sustainability of integrated coastal management projects in Indonesia, MMM4 -Mangrove & Macrobenthos Meeting. St. Augustine, Florida, pp.450-467, 2005.

R. B. Pollnac and R. S. Pomeroy, The Loss of Species: Mangrove Extinction Risk and Geographic Areas of Global Concern Factors influencing the sustainability of integrated coastal management projects in the Philippines and Indonesia, PLoS ONE Ocean & Coastal Management, vol.5, issue.48, pp.233-251, 2005.

J. H. Primavera, M. Dela-cruz, C. Montilijao, H. Consunji, M. Dela-paz et al., Preliminary assessment of post-Haiyan mangrove damage and short-term recovery in Eastern Samar, central Philippines, Marine Pollution Bulletin, vol.109, issue.2, pp.744-750, 2016.
DOI : 10.1016/j.marpolbul.2016.05.050

C. Proisy, P. Couteron, and F. Fromard, Predicting and mapping mangrove biomass from canopy grain analysis using Fourier-based textural ordination of IKONOS images, Remote Sensing of Environment, vol.109, issue.3, pp.379-392, 2007.
DOI : 10.1016/j.rse.2007.01.009

URL : https://hal.archives-ouvertes.fr/hal-00164854

C. Proisy, J. Féret, N. Lauret, J. C. Gastellu-etchegorry, N. Gratiot et al., Mud bank colonization by opportunistic mangroves: A case study from French Guiana using lidar data, Continental Shelf Research, vol.29, issue.3, pp.632-641, 2009.
DOI : 10.1016/j.csr.2008.09.017

URL : https://hal.archives-ouvertes.fr/hal-00480736

A. F. Rahman, D. Dragoni, K. Didan, A. Barreto-munoz, and J. A. Hutabarat, Detecting large scale conversion of mangroves to aquaculture with change point and mixed-pixel analyses of high-fidelity MODIS data, Remote Sensing of Environment, vol.130, pp.96-107, 2013.
DOI : 10.1016/j.rse.2012.11.014

R. Rahmania, C. Proisy, G. Viennois, A. Andayani, B. Subki et al., 13 Years of changes in the extent and physiognomy of mangroves after shrimp farming abandonment, Bali, 2015 8th International Workshop on the Analysis of Multitemporal Remote Sensing Images (Multi-Temp), pp.2015-2016, 2015.
DOI : 10.1109/Multi-Temp.2015.7245801

A. I. Robertson and N. C. Duke, Mangroves as nursery sites: comparisons of the abundance and species composition of fish and crustaceans in mangroves and other nearshore habitats in tropical Australia, Marine Biology, vol.53, issue.Suppl. 3, pp.193-205, 1987.
DOI : 10.1016/B978-0-12-404060-1.50044-7

S. D. Sasmito, D. Murdiyarso, D. A. Friess, and S. Kurnianto, Can mangroves keep pace with contemporary sea level rise? A global data review Ecology of heterotrophic dinitrogen fixation in the rhizosphere of mangrove plant community at the Ganges river estuary in India, Oecologia, vol.87, pp.560-564, 1991.

K. Soudani and C. Francois, A green illusion, Nature, vol.16, issue.7487, pp.165-166, 2014.
DOI : 10.1175/2012EI440.1

K. Soudani, C. Francois, G. Le-maire, L. Dantec, V. Dufrene et al., Comparative analysis of IKONOS, SPOT, and ETM+ data for leaf area index estimation in temperate coniferous and deciduous forest stands, Remote Sensing of Environment, vol.102, issue.1-2, pp.161-175, 2006.
DOI : 10.1016/j.rse.2006.02.004

URL : https://hal.archives-ouvertes.fr/ird-00392425

N. Stevenson, R. R. Lewis, and P. R. Burbridge, Disused shrimp ponds and mangrove rehabilitation The Netherlands, An International Perspective on Wetland Rehabilitation, pp.277-297, 1999.
DOI : 10.1007/978-94-011-4683-8_28

N. J. Stevenson, Disused shrimp ponds: Options for redevelopment of mangroves, Coastal Management, vol.20, issue.4, pp.425-435, 1997.
DOI : 10.1071/MF9960669

T. Tanaka and N. Sunarta, Relationship between regional changes of soil physical properties and volcanic stratigraphy on the southern slope of Batur volcano in the island of Bali, Indonesia, Environmental Geology, vol.28, issue.3, pp.182-191, 1994.
DOI : 10.1007/BF00771787

H. Thatoi, B. C. Behera, and R. R. Mishra, Ecological role and biotechnological potential of mangrove fungi: a review, Mycology, vol.4, pp.54-71, 2013.

P. B. Tomlinson, The botany of mangroves, 1994.
DOI : 10.1017/CBO9781139946575

B. Tranchant, G. Reffray, E. Greiner, D. Nugroho, A. Koch-larrouy et al., Evaluation of an operational ocean model configuration at 1/12?? spatial resolution for the Indonesian seas ??? Part 1: Ocean physics, Geoscientific Model Development Discussions, vol.8, issue.8, pp.6611-6668, 2015.
DOI : 10.5194/gmdd-8-6611-2015

E. Turak, L. Devantier, J. L. Bowen, and J. K. York, Biodiversity and Conservation Priorities of Reef-building Corals in Bali, Indonesia. Bali Marine Rapid Assessment Program Conservation International Valiela, I Mangrove Forests: One of the World's Threatened Major Tropical Environments, BioScience, vol.51, pp.78-130, 2001.

A. P. Van-oudenhoven, Managing ecosystem services and natural capital ??? trade-offs, synergies and challenges, International Journal of Biodiversity Science, Ecosystem Services & Management, vol.7, issue.3, pp.141-142, 2011.
DOI : 10.1080/21513732.2011.616534

A. P. Van-oudenhoven, A. J. Siahainenia, I. Sualia, I. Tonneijck, F. H. Van-der-ploeg et al., Effects of different management regimes on mangrove ecosystem services in Java, Indonesia. In, Technical paper for the 'Mangrove Capital' project: Wageningen University (Environmental Systems Analysis Group, Effects of different management regimes on mangrove ecosystem services in Java, Indonesia. Ocean & Coastal Management, pp.353-367, 2015.

G. Viennois, C. Proisy, J. Feret, J. Prosperi, F. Sidik et al., Multitemporal analysis of high spatial resolution satellite imagery for mangrove species mapping, Ieee Journal of Selected Topics in Applied Earth Observations and Remote Sensing, pp.3680-3686, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01373186

G. Viennois, C. Proisy, R. Rahmania, A. Andayani, B. Subki et al., Temporal stability of mangrove multispectral signatures at fine scales: Stability of mangrove multispectral signatures, 2015 8th International Workshop on the Analysis of Multitemporal Remote Sensing Images (Multi-Temp), pp.2015-2016, 2015.
DOI : 10.1109/Multi-Temp.2015.7245803

URL : https://hal.archives-ouvertes.fr/hal-01244248

B. B. Walters, P. Rönnbäck, J. M. Kovacs, B. Crona, S. A. Hussain et al., Ethnobiology, socio-economics and management of mangrove forests: A review, Aquatic Botany, vol.89, issue.2, pp.220-236, 2008.
DOI : 10.1016/j.aquabot.2008.02.009

T. Wang, H. Zhang, H. Lin, and C. Fang, Textural???Spectral Feature-Based Species Classification of Mangroves in Mai Po Nature Reserve from Worldview-3 Imagery, Remote Sensing, vol.39, issue.1, pp.1-15, 2016.
DOI : 10.5589/m02-004

R. Weeks, P. M. Alino, S. Atkinson, I. Beldia, P. Binson et al., Developing Marine Protected Area Networks in the Coral Triangle: Good Practices for Expanding the Coral Triangle Marine Protected Area System, Developing Marine Protected Area Networks in the Coral Triangle: Good practices for expanding the coral triangle marine protected area system, pp.183-205, 2014.
DOI : 10.1080/08920753.2014.878177

A. T. White, P. Christie, H. D-'agnes, K. Lowry, and N. Milne, Designing ICM projects for sustainability: Lessons from the Philippines and Indonesia, Ocean & Coastal Management, vol.48, issue.3-6, pp.271-296, 2005.
DOI : 10.1016/j.ocecoaman.2005.04.007

N. Widagti, I. Triyulianti, M. D. Manessa, J. Zhou, C. Proisy et al., Changes in density of mangrove forest in Nusa Lembongan Proceeding ot the 2nd CReSOS international symposium on South East Asia Environmental problems and satellite remote sensing Dempasar Mapping local density of young Eucalyptus plantations by individual tree detection in high spatial resolution satellite images, pp.129-141, 2011.

C. Proisy, R. Rahmania, G. Viennois, A. Andayani, S. Baudel et al., Monitoring changes on mangroves coasts using high resolution satellite images. A case study in the Perancak estuary, 12th Biennial Conference of Pan Ocean Remote Sensing Conference, pp.871-876, 2014.