Single-molecule force spectroscopy: optical tweezers, magnetic tweezers and atomic force microscopy Single-molecule biophysics: at the interface of biology, physics and chemistry, Bibliography Nat. Methods J. R. Soc. Interface Phys. Rev. Lett, vol.5, issue.56, pp.491-505, 1986. ,
Observation of a single-beam gradient force optical trap for dielectric particles Atomic Force Microscopy and pharmacology: From microbiology to cancerology Nanoscale analysis of the effects of antibiotics and CX1 on a Pseudomonas aeruginosa multidrug-resistant strain, Nanoscale Adhesion Forces of Pseudomonas aeruginosa Type IV Pili, pp.1028-1050, 1986. ,
and Natural Organic Matter, Environmental Science & Technology, vol.41, issue.23, pp.8031-8037, 2007. ,
DOI : 10.1021/es071047o
Relating the Physical Properties of Pseudomonas aeruginosa Lipopolysaccharides to Virulence by Atomic Force Microscopy, Journal of Bacteriology, vol.193, issue.5, pp.1259-1266, 2011. ,
DOI : 10.1128/JB.01308-10
Nanoscale Characterization and Determination of Adhesion Forces of Pseudomonas aeruginosa Pili by Using Atomic Force Microscopy, Journal of Bacteriology, vol.188, issue.2, pp.370-377, 2006. ,
DOI : 10.1128/JB.188.2.370-377.2006
Adhesion and Nanomechanics of Pili from the Probiotic Lactobacillus rhamnosus GG, ACS Nano, vol.7, issue.4, pp.3685-97, 2013. ,
DOI : 10.1021/nn400705u
Quorum Sensing and Virulence of Pseudomonas aeruginosa during Lung Infection of Cystic Fibrosis Patients, PLoS ONE, vol.5, issue.4, pp.1-10, 2010. ,
DOI : 10.1371/journal.pone.0010115.t001
Pharmacological inhibition of quorum sensing for the treatment of chronic bacterial infections, Journal of Clinical Investigation, vol.112, issue.9, pp.1300-1307, 2003. ,
DOI : 10.1172/JCI20074
The galactophilic lectin, LecA, contributes to biofilm development in Pseudomonas aeruginosa, Environmental Microbiology, vol.336, issue.6, pp.1095-1104, 2006. ,
DOI : 10.1126/science.1112422
Structures of the lectins from Pseudomonas aeruginosa: insights into the molecular basis for host glycan recognition, Microbes and Infection, vol.6, issue.2, pp.221-228, 2004. ,
DOI : 10.1016/j.micinf.2003.10.016
URL : https://hal.archives-ouvertes.fr/hal-00306814
Role of LecA and LecB Lectins in Pseudomonas aeruginosa-Induced Lung Injury and Effect of Carbohydrate Ligands, Infection and Immunity, vol.77, issue.5, pp.2065-2075, 2009. ,
DOI : 10.1128/IAI.01204-08
URL : https://hal.archives-ouvertes.fr/hal-00396635
Structural Basis of the Preferential Binding for Globo-Series Glycosphingolipids Displayed by Pseudomonas aeruginosa Lectin I, Journal of Molecular Biology, vol.383, issue.4, pp.837-853, 2008. ,
DOI : 10.1016/j.jmb.2008.08.028
URL : https://hal.archives-ouvertes.fr/hal-00352496
Glycomimetics and Glycodendrimers as High Affinity Microbial Anti-adhesins, Chemistry - A European Journal, vol.580, issue.25, pp.7490-7499, 2008. ,
DOI : 10.4052/tigg.16.243
Glycomimetics versus Multivalent Glycoconjugates for the Design of High Affinity Lectin Ligands, Chemical Reviews, vol.115, issue.1, pp.525-561, 2015. ,
DOI : 10.1021/cr500303t
URL : https://hal.archives-ouvertes.fr/hal-01146938
The Cluster Glycoside Effect, Chemical Reviews, vol.102, issue.2, pp.555-578, 2002. ,
DOI : 10.1021/cr000418f
Potent divalent inhibitors with rigid glucose click spacers for Pseudomonas aeruginosa lectin LecA, Chemical Communications, vol.17, issue.33, pp.4008-4010, 2012. ,
DOI : 10.1002/chem.201003402
The influence of the aromatic aglycon of galactoclusters on the binding of LecA: a case study with O-phenyl, S-phenyl, O-benzyl, S-benzyl, O-biphenyl and O-naphthyl aglycons, Org. Biomol. Chem., vol.108, issue.45, pp.9166-9179, 2014. ,
DOI : 10.1021/jp031178l
URL : https://hal.archives-ouvertes.fr/hal-01084164
Structure Binding Relationship of Galactosylated Glycoclusters toward Pseudomonas aeruginosa Lectin LecA Using a DNA-Based Carbohydrate Microarray, Bioconjugate Chemistry, vol.25, issue.2, pp.379-392, 2014. ,
DOI : 10.1021/bc4005365
URL : https://hal.archives-ouvertes.fr/hal-00952679
Lung Infection, Journal of Medicinal Chemistry, vol.57, issue.24, pp.10275-10289, 2014. ,
DOI : 10.1021/jm500038p
Validation et criblage de nouvelles molécules anti-infectieuses sur microarray : applications à Pseudomonas aeruginosa, 2016. ,
Early Eradication of Pseudomonas aeruginosa in Patients with Cystic Fibrosis, Paediatric Respiratory Reviews, vol.11, issue.3, pp.177-184, 2010. ,
DOI : 10.1016/j.prrv.2010.05.003
Pseudomonas aeruginosa biofilm formation in the cystic fibrosis airway, Pulmonary Pharmacology & Therapeutics, vol.21, issue.4, pp.595-599, 2008. ,
DOI : 10.1016/j.pupt.2007.12.001
Cystic fibrosis, The Lancet, vol.373, issue.9678, pp.1891-1904, 2009. ,
DOI : 10.1016/S0140-6736(09)60327-5
Pathophysiology and Management of Pulmonary Infections in Cystic Fibrosis, American Journal of Respiratory and Critical Care Medicine, vol.168, issue.8, pp.918-951, 2003. ,
DOI : 10.1080/21548331.1997.11443512
polar motility mechanisms, Molecular Microbiology, vol.184, issue.5, pp.923-938, 2013. ,
DOI : 10.1111/j.1574-6968.2000.tb09002.x
URL : http://onlinelibrary.wiley.com/doi/10.1111/mmi.12403/pdf
Bacterial Biofilms: A Common Cause of Persistent Infections, Science, vol.284, issue.5418, pp.1318-1322, 1999. ,
DOI : 10.1126/science.284.5418.1318
Antibiotic resistance of bacterial biofilms, International Journal of Antimicrobial Agents, vol.35, issue.4, pp.322-332, 2010. ,
DOI : 10.1016/j.ijantimicag.2009.12.011
URL : https://hal.archives-ouvertes.fr/hal-00567285
Role of Flagella in Pathogenesis of Pseudomonas aeruginosa Pulmonary Infection Role of Flagella in Pathogenesis of Pseudomonas aeruginosa Pulmonary Infection, pp.43-51, 1998. ,
AsialoGM1 and TLR5 Cooperate in Flagellin-Induced Nucleotide Signaling to Activate Erk1/2, American Journal of Respiratory Cell and Molecular Biology, vol.34, issue.6, pp.653-660, 2006. ,
DOI : 10.1074/jbc.M411875200
Recognition of Lewis x Derivatives Present on Mucins by Flagellar Components of Pseudomonas aeruginosa, Infection and Immunity, vol.69, issue.9, pp.5243-5248, 2001. ,
DOI : 10.1128/IAI.69.9.5243-5248.2001
URL : https://hal.archives-ouvertes.fr/hal-00149469
Nonmotility and phagocytic resistance of Pseudomonas aeruginosa isolates from chronically colonized patients with cystic Nonmotility and Phagocytic Resistance of Pseudomonas aeruginosa Isolates from Chronically Colonized Patients with Cystic Fibrosis, pp.596-605, 1994. ,
PAO polar pili: twitching motility, Canadian Journal of Microbiology, vol.26, issue.2, pp.146-154, 1980. ,
DOI : 10.1139/m80-022
Direct observation of extension and retraction of type IV pili, Proceedings of the National Academy of Sciences, vol.19, issue.13, pp.6901-6905, 2001. ,
DOI : 10.1093/emboj/19.13.3223
Defining a lectin, Nature, vol.290, issue.5803, 1981. ,
DOI : 10.1038/290188a0
The Intracellular Localization of Pseudomonas aeruginosa Lectins, Microbiology, vol.129, issue.10, pp.3085-3090, 1983. ,
DOI : 10.1099/00221287-129-10-3085
Multiple aspects of Pseudomonas aeruginosa lectins, Acta Leopoldina NF, vol.75, pp.153-177, 1997. ,
The galactophilic lectin (PA-IL, gene LecA) from Pseudomonas aeruginosa. Its binding requirements and the localization of lectin receptors in various mouse tissues, Microbial Pathogenesis, vol.40, issue.5, pp.191-197, 2006. ,
DOI : 10.1016/j.micpath.2006.01.006
Structural Basis of Carbohydrate Recognition by the Lectin LecB from Pseudomonas aeruginosa, Journal of Molecular Biology, vol.331, issue.4, pp.861-870, 2003. ,
DOI : 10.1016/S0022-2836(03)00754-X
Cytotoxicity of Pseudomonas aeruginosa Internal Lectin PA-I to Respiratory Epithelial Cells in Primary Culture, Infect. Immun, vol.62, pp.4481-4487, 1994. ,
A lipid zipper triggers bacterial invasion, Proceedings of the National Academy of Sciences, vol.70, issue.3, pp.6-11, 2014. ,
DOI : 10.1016/S0006-3495(96)79693-5
URL : https://hal.archives-ouvertes.fr/hal-01066717
The Key Role of Pseudomonas aeruginosa PA-I Lectin on Experimental Gut-Derived Sepsis, Annals of Surgery, vol.232, issue.1 ,
DOI : 10.1097/00000658-200007000-00019
Multivalent glycoconjugates as anti-pathogenic agents, Chem. Soc. Rev., vol.4, issue.11, pp.4709-4736, 2013. ,
DOI : 10.1002/cmdc.200800380
URL : https://hal.archives-ouvertes.fr/hal-01326075
Role of polysaccharides in Pseudomonas aeruginosa biofilm development, Current Opinion in Microbiology, vol.10, issue.6, pp.644-648, 2007. ,
DOI : 10.1016/j.mib.2007.09.010
Virulence factors in Pseudomonas aeruginosa: mechanisms and modes of regulation, Ann. Biol. Clin, vol.69, pp.393-403, 2011. ,
in Cystic Fibrosis, American Journal of Clinical Pathology, vol.128, issue.1, pp.32-34, 2007. ,
DOI : 10.1309/KJRPC7DD5TR9NTDM
Biofilm exopolysaccharides: a strong and sticky framework, Microbiology, vol.147, issue.1, pp.3-9, 2001. ,
DOI : 10.1099/00221287-147-1-3
Architectures of Multivalent Glycomimetics for Probing Carbohydrate???Lectin Interactions, Top Curr Chem, vol.288, pp.17-65, 2009. ,
DOI : 10.1007/128_2008_30
Multivalent glycoconjugate syntheses and applications using aromatic scaffolds, Chemical Society Reviews, vol.12, issue.11, pp.4657-708, 2013. ,
DOI : 10.1002/chem.200500901
Thermodynamics and chemical characterization of protein???carbohydrate interactions: The multivalency issue, Comptes Rendus Chimie, vol.14, issue.1, pp.74-95, 2011. ,
DOI : 10.1016/j.crci.2010.05.020
URL : https://hal.archives-ouvertes.fr/hal-00577113
Lectins by Plant and Microbial Branched Polysaccharides Used as Food Additives, Journal of Agricultural and Food Chemistry, vol.57, issue.15, pp.6908-6913, 2009. ,
DOI : 10.1021/jf900631j
Multivalent Gold Glycoclusters: High Affinity Molecular Recognition by Bacterial Lectin PA-IL, Chemistry - A European Journal, vol.40, issue.14 ,
DOI : 10.1107/S0021889806045833
URL : https://hal.archives-ouvertes.fr/hal-00720311
Synthesis and binding properties of divalent and trivalent clusters of the Lewis a disaccharide moiety to Pseudomonas aeruginosa lectin PA-IIL, Organic & Biomolecular Chemistry, vol.28, issue.18, pp.2953-2961, 2007. ,
DOI : 10.1021/bc070129z
URL : https://hal.archives-ouvertes.fr/hal-00305549
Microbial recognition of human cell surface glycoconjugates, Current Opinion in Structural Biology, vol.18, issue.5, pp.567-76, 2008. ,
DOI : 10.1016/j.sbi.2008.08.001
URL : https://hal.archives-ouvertes.fr/hal-00352497
Polyvalent Interactions in Biological Systems: Implications for Design and Use of Multivalent Ligands and Inhibitors, Angewandte Chemie International Edition, vol.37, issue.20, pp.2754-2794, 1998. ,
DOI : 10.1002/(SICI)1521-3773(19981102)37:20<2754::AID-ANIE2754>3.0.CO;2-3
Synthetic multivalent ligands in the exploration of cell-surface interactions, Current Opinion in Chemical Biology, vol.4, issue.6, pp.696-703, 2000. ,
DOI : 10.1016/S1367-5931(00)00153-8
Multivalent Protein???Carbohydrate Interactions. A New Paradigm for Supermolecular Assembly and Signal Transduction, Biochemistry, vol.40, issue.10, pp.3009-3015, 2001. ,
DOI : 10.1021/bi002544j
Développement d'une plateforme de criblage pour la recherche de nouvelles molécules anti-infectieuses : applications à Pseudomonas aeruginosa, 2013. ,
Selectivity among Two Lectins: Probing the Effect of Topology, Multivalency and Flexibility of ???Clicked??? Multivalent Glycoclusters, Chemistry - A European Journal, vol.11, issue.7, pp.2146-2159, 2011. ,
DOI : 10.1016/S0957-4166(99)00589-3
URL : https://hal.archives-ouvertes.fr/hal-00566172
Achieving High Affinity towards a Bacterial Lectin through Multivalent Topological Isomers of Calix[4]arene Glycoconjugates, Chemistry - A European Journal, vol.10, issue.47, pp.13232-13240, 2009. ,
DOI : 10.7150/ijms.5.371
URL : https://hal.archives-ouvertes.fr/hal-00691524
AFM investigation of Pseudomonas aeruginosa lectin LecA (PA-IL) filaments induced by multivalent glycoclusters, Chemical Communications, vol.264, issue.33, pp.9483-9485, 2011. ,
DOI : 10.1016/j.febslet.2005.02.028
URL : https://hal.archives-ouvertes.fr/hal-00619415
Quantitative analysis (Kd and IC50) of glycoconjugates interactions with a bacterial lectin on a carbohydrate microarray with DNA Direct Immobilization (DDI), Biosensors and Bioelectronics, vol.40, issue.1, pp.153-60, 2013. ,
DOI : 10.1016/j.bios.2012.07.003
URL : https://hal.archives-ouvertes.fr/hal-00788052
Atomic Force Microscopy, 2010. ,
DOI : 10.1093/acprof:oso/9780199570454.001.0001
URL : https://hal.archives-ouvertes.fr/hal-00356780
Atomic Force Microscopy in Liquids, 2012. ,
DOI : 10.1002/9783527649808
Small cantilevers for force spectroscopy of single molecules, Journal of Applied Physics, vol.86, issue.4, p.2258, 1999. ,
DOI : 10.1115/1.2874471
Increased imaging speed and force sensitivity for bio-applications with small cantilevers using a conventional AFM setup, Micron, vol.43, issue.12, pp.1399-407, 2012. ,
DOI : 10.1016/j.micron.2012.05.007
Force measurements with the atomic force microscope: Technique, interpretation and applications, Surface Science Reports, vol.59, issue.1-6, pp.1-152, 2005. ,
DOI : 10.1016/j.surfrep.2005.08.003
Measuring the spring constant of atomic force microscope cantilevers: thermal fluctuations and other methods, Nanotechnology, vol.13, issue.1, pp.33-37, 2002. ,
DOI : 10.1088/0957-4484/13/1/307
Calibration of rectangular atomic force microscope cantilevers, Review of Scientific Instruments, vol.70, issue.10, p.3967, 1999. ,
DOI : 10.1063/1.1144646
Spring constant calibration of atomic force microscope cantilevers of arbitrary shape, Review of Scientific Instruments, vol.83, issue.10, p.103705, 2012. ,
DOI : 10.1063/1.2140284
A nondestructive method for determining the spring constant of cantilevers for scanning force microscopy, Review of Scientific Instruments, vol.64, issue.2, p.403, 1993. ,
DOI : 10.1103/PhysRevB.45.11226
A method for determining the spring constant of cantilevers for atomic force microscopy, Measurement Science and Technology, vol.7, issue.2, pp.179-184, 1999. ,
DOI : 10.1088/0957-0233/7/2/010
Calculation of thermal noise in atomic force microscopy, Nanotechnology, vol.6, issue.1, pp.1-7, 1995. ,
DOI : 10.1088/0957-4484/6/1/001
Theoretical analysis of the static deflection of plates for atomic force microscope applications, Journal of Applied Physics, vol.17, issue.1, p.1, 1993. ,
DOI : 10.1116/1.576520
Determination of the spring constants of probes for force microscopy/spectroscopy, Nanotechnology, vol.7, issue.3, pp.259-262, 1996. ,
DOI : 10.1088/0957-4484/7/3/014
Calibration of atomic???force microscope tips, Review of Scientific Instruments, vol.2, issue.7, p.1868, 1993. ,
DOI : 10.1063/1.107024
Thermomechanical noise of a free v-shaped cantilever for atomic-force microscopy, Ultramicroscopy, vol.86, issue.1-2, pp.207-215, 2001. ,
DOI : 10.1016/S0304-3991(00)00077-2
Force-distance curves by atomic force microscopy, Surface Science Reports, vol.34, issue.1-3, pp.1-104, 1999. ,
DOI : 10.1016/S0167-5729(99)00003-5
Surface and Interfacial Forces, 2010. ,
DOI : 10.1002/9783527629411
Observation of Liquid Neck Formation with Scanning Force Microscopy Techniques, Langmuir, vol.14, issue.9, pp.2230-2234, 1998. ,
DOI : 10.1021/la971150z
Adhesion Forces between Glass and Silicon Surfaces in Air Studied by AFM:?? Effects of Relative Humidity, Particle Size, Roughness, and Surface Treatment, Langmuir, vol.18, issue.21, pp.8045-8055, 2002. ,
DOI : 10.1021/la0259196
Attractive and repulsive tip-sample interaction regimes in tapping-mode atomic force microscopy, Physical Review B, vol.73, issue.7, pp.4961-4967, 1999. ,
DOI : 10.1063/1.122893
Effects of tip-sample forces and humidity on the imaging of DNA with a scanning force microscope, Scanning, vol.26, issue.44, pp.344-350, 1996. ,
DOI : 10.1111/j.1365-2818.1994.tb03441.x
Dynamic atomic force microscopy methods, Surface Science Reports, vol.47, issue.6-8, pp.197-301, 2002. ,
DOI : 10.1016/S0167-5729(02)00077-8
Intermolecular forces in biology, Quarterly Reviews of Biophysics, vol.34, issue.02, 2001. ,
DOI : 10.1017/S0033583501003687
Measuring electrostatic, van der Waals, and hydration forces in electrolyte solutions with an atomic force microscope, Biophysical Journal, vol.60, issue.6, pp.1438-1444, 1991. ,
DOI : 10.1016/S0006-3495(91)82180-4
The height of biomolecules measured with the atomic force microscope depends on electrostatic interactions, Biophysical Journal, vol.73, issue.3, pp.1633-1644, 1997. ,
DOI : 10.1016/S0006-3495(97)78195-5
Nanomechanical Properties of Proteins and Membranes Depend on Loading Rate and Electrostatic Interactions, ACS Nano, vol.7, issue.3, pp.2642-50, 2013. ,
DOI : 10.1021/nn400015z
Modulation of hydrophobic interactions by proximally immobilized ions, Nature, vol.46, issue.7534, pp.347-350, 2015. ,
DOI : 10.1021/jp972635z
Single Molecule Force Spectroscopy on Polysaccharides by Atomic Force Microscopy, Science, vol.275, issue.5304, pp.1295-1302, 1997. ,
DOI : 10.1126/science.275.5304.1295
Manipulation of the mechanical properties of a virus by protein engineering, Proceedings of the National Academy of Sciences, vol.8, issue.1, pp.4150-4155, 2008. ,
DOI : 10.1016/0263-7855(90)80070-V
High-Speed AFM and Applications to Biomolecular Systems, Annual Review of Biophysics, vol.42, issue.1, pp.393-414, 2013. ,
DOI : 10.1146/annurev-biophys-083012-130324
Atomic force microscope???force mapping and profiling on a sub 100????? scale, Journal of Applied Physics, vol.119, issue.10, pp.4723-4729, 1987. ,
DOI : 10.1063/1.97288
Amplitude Modulation Atomic Force Microscopy, 2010. ,
DOI : 10.1002/9783527632183
Atomic force microscopy contact, tapping, and jumping modes for imaging biological samples in liquids, Physical Review E, vol.88, issue.3, pp.1-9, 2004. ,
DOI : 10.1103/PhysRevLett.88.226103
The Intrinsic Resolution Limit in the Atomic Force Microscope: Implications for Heights of Nano-Scale Features, PLoS ONE, vol.12, issue.300, pp.1-7, 2011. ,
DOI : 10.1371/journal.pone.0023821.s012
Tapping mode atomic force microscopy in liquids, Applied Physics Letters, vol.21, issue.13, pp.1738-1740, 1994. ,
DOI : 10.1093/nar/21.5.1117
The role of shear forces in scanning force microscopy: a comparison between the jumping mode and tapping mode, Surface Science, vol.453, issue.1-3, pp.152-158, 2000. ,
DOI : 10.1016/S0039-6028(00)00341-1
cantilevers for enhanced force microscope sensitivity, Journal of Applied Physics, vol.6, issue.2, pp.668-673, 1991. ,
DOI : 10.1063/1.104030
The Chemical Structure of a Molecule Resolved by Atomic Force Microscopy, Science, vol.27, issue.15, pp.1110-1114, 2009. ,
DOI : 10.1002/jcc.20495
Frequency modulation atomic force microscopy: a dynamic measurement technique for biological systems, Nanotechnology, vol.16, issue.3, pp.85-89, 2005. ,
DOI : 10.1088/0957-4484/16/3/016
Beyond the Helix Pitch: Direct Visualization of Native DNA in Aqueous Solution, ACS Nano, vol.7, issue.2, pp.1817-1822, 2013. ,
DOI : 10.1021/nn400071n
A High-speed Atomic Force Microscope for Studying Biological Macromolecules in Action, ChemPhysChem, vol.12, issue.11, pp.1196-1202, 2001. ,
DOI : 10.1016/S0960-9822(01)00683-2
DNA height in scanning force microscopy, Ultramicroscopy, vol.96, issue.2, pp.167-174, 2003. ,
DOI : 10.1016/S0304-3991(03)00004-4
Aspect-ratio and lateral-resolution enhancement in force microscopy by attaching nanoclusters generated by an ion cluster source at the end of a silicon tip, Review of Scientific Instruments, vol.82, issue.2, p.23710, 2011. ,
DOI : 10.1103/PhysRevB.81.165430
Algorithms for scanned probe microscope image simulation, surface reconstruction, and tip estimation, Journal of Research of the National Institute of Standards and Technology, vol.102, issue.4, p.425, 1997. ,
DOI : 10.6028/jres.102.030
Measuring surface forces in aqueous electrolyte solution with the atomic force microscope, Bioelectrochemistry and Bioenergetics, vol.38, issue.1, pp.191-201, 1995. ,
DOI : 10.1016/0302-4598(95)01800-T
AFM volumetric methods for the characterization of proteins and nucleic acids, Methods, vol.60, issue.2, pp.113-121, 2013. ,
DOI : 10.1016/j.ymeth.2013.02.005
Atomic force microscopy: a nanoscopic window on the cell surface, Trends in Cell Biology, vol.21, issue.8, pp.461-469, 2011. ,
DOI : 10.1016/j.tcb.2011.04.008
Detection and localization of individual antibody-antigen recognition events by atomic force microscopy., Proceedings of the National Academy of Sciences, vol.93, issue.8, pp.3477-81, 1996. ,
DOI : 10.1073/pnas.93.8.3477
Detection and localization of single molecular recognition events using atomic force microscopy, Nature Methods, vol.34, issue.5, 2006. ,
DOI : 10.1042/bj1730723
Direct observation of an ensemble of stable collapsed states in the mechanical folding of ubiquitin, Proceedings of the National Academy of Sciences, vol.92, issue.8, pp.10534-10543, 2009. ,
DOI : 10.1529/biophysj.106.099481
AFM, a tool for single-molecule experiments, Applied Physics A: Materials Science & Processing, vol.68, issue.2, pp.173-176, 1999. ,
DOI : 10.1007/s003390050873
Single-cell force spectroscopy, Journal of Cell Science, vol.121, issue.11, pp.1785-1791, 2008. ,
DOI : 10.1242/jcs.030999
URL : http://jcs.biologists.org/content/joces/121/11/1785.full.pdf
Single molecule force spectroscopy in biology using the atomic force microscope, Progress in Biophysics and Molecular Biology, vol.74, issue.1-2, pp.37-61, 2000. ,
DOI : 10.1016/S0079-6107(00)00014-6
Data analysis of interaction forces measured with the atomic force microscope, Ultramicroscopy, vol.82, issue.1-4, pp.85-95, 2000. ,
DOI : 10.1016/S0304-3991(99)00154-0
Force as a single molecule probe of multidimensional protein energy landscapes, Current Opinion in Structural Biology, vol.23, issue.1, pp.48-57, 2013. ,
DOI : 10.1016/j.sbi.2012.11.007
Single-molecule folding, Current Opinion in Structural Biology, vol.13, issue.1, pp.88-97, 2003. ,
DOI : 10.1016/S0959-440X(03)00011-3
Stretching polysaccharides on live cells using single molecule force spectroscopy, Nature Protocols, vol.37, issue.6, pp.939-985, 2009. ,
DOI : 10.1007/s00249-007-0183-x
Simple test system for single molecule recognition force microscopy, Analytica Chimica Acta, vol.479, issue.1, pp.59-75, 2003. ,
DOI : 10.1016/S0003-2670(02)01373-9
On the mechanism of recombination hotspot scanning during double-stranded DNA break resection, Proc. Natl ,
DOI : 10.1016/j.molcel.2008.03.010
Atomic force microscopy: Determination of unbinding force, off rate and energy barrier for protein???ligand interaction, Micron, vol.38, issue.5, pp.446-461, 2007. ,
DOI : 10.1016/j.micron.2006.06.014
Brownian motion in a field of force and the diffusion model of chemical reactions, Physica, vol.7, issue.4, pp.284-304, 1940. ,
DOI : 10.1016/S0031-8914(40)90098-2
Energy landscapes of receptor???ligand bonds explored with dynamic force spectroscopy, Nature, vol.394, issue.6714, pp.50-53, 1999. ,
DOI : 10.1038/27873
Biomolecular force measurements and the atomic force microscope, Current Opinion in Biotechnology, vol.13, issue.1, pp.47-51, 2002. ,
DOI : 10.1016/S0958-1669(02)00283-5
Probing single molecule interactions by AFM using bio-functionalized dendritips, Sensors and Actuators B: Chemical, vol.168, pp.436-441, 2012. ,
DOI : 10.1016/j.snb.2012.04.048
URL : https://hal.archives-ouvertes.fr/hal-01268327
Comparison of different aminofunctionalization strategies for attachment of single antibodies to AFM cantilevers, Ultramicroscopy, vol.107, issue.10-11, pp.922-929, 2007. ,
DOI : 10.1016/j.ultramic.2007.02.035
Antibody Linking to Atomic Force Microscope Tips via Disulfide Bond Formation, Bioconjugate Chemistry, vol.17, issue.6, pp.1473-81, 2006. ,
DOI : 10.1021/bc060252a
Linking of Sensor Molecules with Amino Groups to Amino-Functionalized AFM Tips, Bioconjugate Chemistry, vol.22, issue.6, pp.1239-1287, 2011. ,
DOI : 10.1021/bc200099t
Strength of a Weak Bond Connecting Flexible Polymer Chains, Biophysical Journal, vol.76, issue.5, pp.2439-2447, 1999. ,
DOI : 10.1016/S0006-3495(99)77399-6
Atomic Force Microscopy in Microbiology: New Structural and Functional Insights into the Microbial Cell Surface, mBio, vol.5, issue.4, pp.1-14, 2014. ,
DOI : 10.1128/mBio.01363-14
Force probing surfaces of living cells to molecular resolution, Nature Chemical Biology, vol.13, issue.6, pp.383-390, 2009. ,
DOI : 10.1063/1.1855407
A practical guide to quantify cell adhesion using single-cell force spectroscopy, Methods, vol.60, issue.2, pp.169-178, 2013. ,
DOI : 10.1016/j.ymeth.2013.01.006
Probing the Interaction Forces of Prostate Cancer Cells with Collagen I and Bone Marrow Derived Stem Cells on the Single Cell Level, PLoS ONE, vol.32, issue.3, p.57706, 2013. ,
DOI : 10.1371/journal.pone.0057706.s002
TPA primes ??2??1 integrins for cell adhesion, FEBS Letters, vol.14, issue.23-24, pp.3520-3524, 2008. ,
DOI : 10.1038/nm1722
Discrete interactions in cell adhesion measured by single-molecule force spectroscopy, Nature Cell Biology, vol.6, issue.6, pp.313-317, 2000. ,
DOI : 10.1088/0957-4484/6/1/001
Multiple Membrane Tethers Probed by Atomic Force Microscopy, Biophysical Journal, vol.89, issue.6, pp.4320-4329, 2005. ,
DOI : 10.1529/biophysj.104.058180
Measuring Kinetic Dissociation/Association Constants Between Lactococcus lactis Bacteria and Mucins Using Living Cell Probes, Biophysical Journal, vol.101, issue.11, pp.2843-2853, 2011. ,
DOI : 10.1016/j.bpj.2011.10.034
URL : https://doi.org/10.1016/j.bpj.2011.10.034
Force microscopic and thermodynamic analysis of the adhesion between Pseudomonas aeruginosa and Candida albicans, Soft Matter, vol.16, issue.24, p.6454, 2012. ,
DOI : 10.1016/S0927-7765(99)00027-2
Single-Cell Force Spectroscopy of Probiotic Bacteria, Biophysical Journal, vol.104, issue.9, pp.1886-92, 2013. ,
DOI : 10.1016/j.bpj.2013.03.046
Comparison of Atomic Force Microscopy Interaction Forces between Bacteria and Silicon Nitride Substrata for Three Commonly Used Immobilization Methods, Applied and Environmental Microbiology, vol.70, issue.9, pp.5441-5446, 2004. ,
DOI : 10.1128/AEM.70.9.5441-5446.2004
Force measurements with the atomic force microscope: Technique, interpretation and applications, Surface Science Reports, vol.59, issue.1-6, pp.1-152, 2005. ,
DOI : 10.1016/j.surfrep.2005.08.003
The Colloidal Probe Technique and its Application to Adhesion Force Measurements, Particle & Particle Systems Characterization, vol.19, issue.3, pp.129-143, 2002. ,
DOI : 10.1002/1521-4117(200207)19:3<129::AID-PPSC129>3.0.CO;2-G
Direct measurement of colloidal forces using an atomic force microscope, Nature, vol.353, issue.6341, pp.239-241, 1991. ,
DOI : 10.1038/353239a0
Quantifying the forces guiding microbial cell adhesion using single-cell force spectroscopy, Nature Protocols, vol.9, issue.5, pp.1049-55, 2014. ,
DOI : 10.1073/pnas.021321798
Sample preparation procedures for biological atomic force microscopy, Journal of Microscopy, vol.70, issue.3, pp.199-207, 2005. ,
DOI : 10.1016/0014-5793(92)81241-D
URL : https://hal.archives-ouvertes.fr/hal-00017269
Surface Properties of Cleaved Mica, Colloid Journal, vol.66, issue.3, pp.322-328, 2004. ,
DOI : 10.1023/B:COLL.0000030843.30563.c9
Localization of Single Avidin-Biotin Interactions Using Simultaneous Topography and Molecular Recognition Imaging, ChemPhysChem, vol.100, issue.5, pp.897-900, 2005. ,
DOI : 10.1016/j.ultramic.2003.12.014
DNA binding to mica correlates with cationic radius: assay by atomic force microscopy, Biophysical Journal, vol.70, issue.4, pp.1933-1942, 1996. ,
DOI : 10.1016/S0006-3495(96)79757-6
Ultralarge atomically flat template-stripped Au surfaces for scanning probe microscopy, Surf. Sci, vol.291, pp.39-46, 1993. ,
Immobilisation of living bacteria for AFM imaging under physiological conditions, Ultramicroscopy, vol.110, issue.11, pp.1349-1357, 2010. ,
DOI : 10.1016/j.ultramic.2010.06.010
Single molecule force spectroscopy by AFM indicates helical structure of poly(ethylene-glycol) in water, New Journal of Physics, vol.1, pp.6-7, 1999. ,
DOI : 10.1088/1367-2630/1/1/006
Nanoscale effects of antibiotics on P. aeruginosa, Nanomedicine: Nanotechnology, Biology and Medicine, vol.8, issue.1, pp.12-16, 2012. ,
DOI : 10.1016/j.nano.2011.09.009
URL : https://hal.archives-ouvertes.fr/hal-01650395
Atomic Force Microscopy Study of the Effect of Lipopolysaccharides and Extracellular Polymers on Adhesion of Pseudomonas aeruginosa, Journal of Bacteriology, vol.189, issue.23, pp.8503-8509, 2007. ,
DOI : 10.1128/JB.00769-07
Heterogeneity in Bacterial Surface Polysaccharides, Probed on a Single-Molecule Basis, Biomacromolecules, vol.3, issue.4, pp.661-667, 2002. ,
DOI : 10.1021/bm015648y
Nanoscale investigation on Pseudomonas aeruginosa biofilm formed on porous silicon using atomic force microscopy, Scanning, vol.36, pp.1-3, 2014. ,
Detection, Localization, and Conformational Analysis of Single Polysaccharide Molecules on Live Bacteria, Detection, Localization and Conformational Analysis of Single Polysaccharide Molecules on Live Bacteria, pp.1921-1929, 2008. ,
DOI : 10.1021/nn800341b
Imaging the Molecular Dimensions and Oligomerization of Proteins at Liquid/Solid Interfaces, The Journal of Physical Chemistry B, vol.102, issue.9, pp.1649-1657, 1998. ,
DOI : 10.1021/jp9732219
Single-Molecule Reconstruction of Oligonucleotide Secondary Structure by Atomic Force Microscopy, Small, vol.25, issue.16, pp.3257-3261, 2014. ,
DOI : 10.1002/jcc.20084
An overview of the biophysical applications of atomic force microscopy, Biophysical Chemistry, vol.107, issue.2, pp.133-149, 2004. ,
DOI : 10.1016/j.bpc.2003.09.001
Synthesis and AFM studies of lectin???carbohydrate self-assemblies, Tetrahedron, vol.64, issue.30-31, pp.7331-7337, 2008. ,
DOI : 10.1016/j.tet.2008.05.055
Lectin LecA, ACS Chemical Biology, vol.8, issue.9, pp.1925-1930, 2013. ,
DOI : 10.1021/cb400303w
LecA (PA-IL) by atomic force microscopy: influence of the glycocluster concentration, Journal of Molecular Recognition, vol.47, issue.33, pp.694-699, 2013. ,
DOI : 10.1039/c1cc13097h
URL : https://hal.archives-ouvertes.fr/hal-01066774
Caractérisation par microscopie à force atomique des arrangements protéine/sucre impliquant la lectine PA-IL de la bactérie pseudomonas aeruginosa, 2012. ,
Energy dissipation effects on imaging of soft materials by dynamic atomic force microscopy: A DNA-chip study, Materials Science and Engineering: C, vol.33, issue.4 ,
DOI : 10.1016/j.msec.2013.01.055
Thermodynamic Studies of Lectin???Carbohydrate Interactions by Isothermal Titration Calorimetry, Chemical Reviews, vol.102, issue.2, pp.387-429, 2002. ,
DOI : 10.1021/cr000401x
in Applications of Calorimetry in a Wide Context -Differential Scanning Calorimetry, Isothermal Titration Calorimetry and Microcalorimetry, pp.73-104, 2013. ,
Isothermal Titration Calorimetry: Experimental Design, Data Analysis, and Probing Macromolecule/Ligand Binding and Kinetic Interactions, A. in Methods in Cell Biology, vol.84, pp.79-113, 2008. ,
DOI : 10.1016/S0091-679X(07)84004-0
The Monte Carlo Method, Journal of the American Statistical Association, vol.44, issue.247, pp.335-341, 1949. ,
DOI : 10.1080/01621459.1949.10483310
A new spectroscopic molecular mechanics force field. Parameters for proteins, The Journal of Chemical Physics, vol.72, issue.21, pp.8586-8605, 1995. ,
DOI : 10.1002/jcc.540150207
Increasing Normal Modes Analysis Accuracy:?? The SPASIBA Spectroscopic Force Field Introduced into the CHARMM Program, The Journal of Physical Chemistry A, vol.108, issue.18, pp.4019-4029, 2004. ,
DOI : 10.1021/jp031178l
Rational Design and Synthesis of Optimized Glycoclusters for Multivalent Lectin-Carbohydrate Interactions: Influence of the Linker Arm, Chemistry - A European Journal, vol.36, issue.20, pp.6250-6263, 2012. ,
DOI : 10.1107/S0021889803021800
URL : https://hal.archives-ouvertes.fr/hal-00691472
Immobilization of single-stranded DNA fragments to solid surfaces and their repeatable specific hybridization: covalent binding or adsorption?, Sensors and Actuators B: Chemical, vol.101, issue.1-2, pp.112-121, 2004. ,
DOI : 10.1016/j.snb.2004.02.041
Silanization of silica and glass slides for DNA microarrays by impregnation and gas phase protocols: A comparative study, Materials Science and Engineering: C, vol.31, issue.2, pp.384-390, 2011. ,
DOI : 10.1016/j.msec.2010.10.016
URL : https://hal.archives-ouvertes.fr/hal-00877214
A New, Simple Method for Linking of Antibodies to Atomic Force Microscopy Tips, Bioconjugate Chemistry, vol.18, issue.4, pp.1176-84, 2007. ,
DOI : 10.1021/bc070030s
Probes Functionalization Available at ,
Value Determination by Using a Microarray, ChemBioChem, vol.33, issue.16, pp.2329-2336, 2015. ,
DOI : 10.1016/j.msec.2013.01.055
URL : https://hal.archives-ouvertes.fr/hal-01489380
Elasticity measurement of living cells with an atomic force microscope: data acquisition and processing, Pfl??gers Archiv - European Journal of Physiology, vol.2, issue.Suppl 1, pp.551-559, 2008. ,
DOI : 10.1590/S0001-37652007000100003
Fuzzy logic algorithm to extract specific interaction forces from atomic force microscopy data, Review of Scientific Instruments, vol.72, issue.5, pp.2082-2086, 2000. ,
DOI : 10.1073/pnas.90.6.2137
Probing of miniPEG??-PNA???DNA Hybrid Duplex Stability with AFM Force Spectroscopy, Biochemistry, vol.55, issue.10, pp.1523-1528, 2016. ,
DOI : 10.1021/acs.biochem.5b01250
Single-molecule force spectroscopy on polyproteins and receptor???ligand complexes: The current toolbox, Journal of Structural Biology, vol.197, issue.1, 2016. ,
DOI : 10.1016/j.jsb.2016.02.011
Nonspecific interactions in AFM force spectroscopy measurements, Journal of Molecular Recognition, vol.21, issue.18, pp.53-59, 2012. ,
DOI : 10.1007/978-0-387-76497-9_19
Physical chemistry: Hydrophobic interactions in context, Nature, vol.517, issue.7534, pp.277-279, 2015. ,
DOI : 10.1093/protein/gzs042
Sitting at the Edge: How Biomolecules use Hydrophobicity to Tune Their Interactions and Function, The Journal of Physical Chemistry B, vol.116, issue.8, pp.2498-2503, 2012. ,
DOI : 10.1021/jp2107523
Single-molecule studies of DNA mechanics, Current Opinion in Structural Biology, vol.10, issue.3, pp.279-85, 2000. ,
DOI : 10.1016/S0959-440X(00)00085-3
Practical single molecule force spectroscopy: How to determine fundamental thermodynamic parameters of intermolecular bonds with an atomic force microscope, Methods, vol.60, issue.2, pp.142-50, 2013. ,
DOI : 10.1016/j.ymeth.2013.03.014
Drug???target residence time and its implications for lead optimization, Nature Reviews Drug Discovery, vol.69, issue.9, pp.730-739, 2006. ,
DOI : 10.1038/nrd2082
Differences in Zero-Force and Force-Driven Kinetics of Ligand Dissociation from ??-Galactoside-Specific Proteins (Plant and Animal Lectins, Immunoglobulin G) Monitored by Plasmon Resonance and Dynamic Single Molecule Force Microscopy, Archives of Biochemistry and Biophysics, vol.383, issue.2, pp.157-170, 2000. ,
DOI : 10.1006/abbi.2000.1993
Strength of Multiple Parallel Biological Bonds, Biophysical Journal, vol.90, issue.12, pp.4686-4691, 2006. ,
DOI : 10.1529/biophysj.105.080291
Force Nanoscopy as a Versatile Platform for Quantifying the Activity of Antiadhesion Compounds Targeting Bacterial Pathogens, Nano Letters, vol.16, issue.2, pp.1299-1307, 2016. ,
DOI : 10.1021/acs.nanolett.5b04689
The Pseudomonas aeruginosa Lectins PA-IL and PA-IIL Are Controlled by Quorum Sensing and by RpoS, Journal of Bacteriology, vol.182, issue.22, pp.6401-6411, 2000. ,
DOI : 10.1128/JB.182.22.6401-6411.2000
CFTR expression and chloride secretion in polarized immortal human bronchial epithelial cells., American Journal of Respiratory Cell and Molecular Biology, vol.10, issue.1, pp.38-47, 1994. ,
DOI : 10.1165/ajrcmb.10.1.7507342
Influence of apical fluid volume on the development of functional intercellular junctions in the human epithelial cell line 16HBE14o- : implications for the use of this cell line as an in vitro model for bronchial drug absorption studies, Cell and Tissue Research, vol.308, issue.3, pp.391-400, 2002. ,
DOI : 10.1007/s00441-002-0548-5
Tight junction properties of the immortalized human bronchial epithelial cell lines Calu???3 and 16HBE14o???, European Respiratory Journal, vol.15, issue.6, pp.1058-68, 2000. ,
DOI : 10.1034/j.1399-3003.2000.01514.x
Assay for characterizing the recovery of vertebrate cells for adhesion measurements by single-cell force spectroscopy, FEBS Letters, vol.275, issue.19, pp.3639-3648, 2014. ,
DOI : 10.1074/jbc.275.7.4592
Receptor-Independent, Direct Membrane Binding Leads to Cell-Surface Lipid Sorting and Syk Kinase Activation in Dendritic Cells, Receptor-Independent, Direct Membrane Binding Leads to Cell-Surface Lipid Sorting and Syk Kinase Activation in Dendritic Cells, pp.807-818, 2008. ,
DOI : 10.1016/j.immuni.2008.09.013
Nonparametric Statistics. A Step-by-Step Approach, Journal of Chemical Information and Modeling, vol.53, 2014. ,
Forced unfolding modulated by disulfide bonds in the Ig domains of a cell adhesion molecule, Proceedings of the National Academy of Sciences, vol.220, issue.1, pp.1565-1570, 2001. ,
DOI : 10.1006/abio.1994.1290
Multiscale Model Describing Bacterial Adhesion and Detachment, Langmuir, vol.32, issue.20, pp.5213-5222, 2016. ,
DOI : 10.1021/acs.langmuir.6b00882
Proinflammatory cytokine responses to P. aeruginosa infection in human airway epithelial cell lines, Am.J.Physiol Lung Cell Mol.Physiol, vol.280, p.0, 2001. ,
Molecular determinants of bacterial adhesion monitored by atomic force microscopy, Proceedings of the National Academy of Sciences, vol.67, issue.2, pp.11059-11064, 1998. ,
DOI : 10.1016/S0006-3495(94)80556-9
Characterization of DNA Probes Immobilized on Gold Surfaces, Journal of the American Chemical Society, vol.119, issue.38, pp.8916-8920, 1997. ,
DOI : 10.1021/ja9719586
(magali.phaner@ec-lyon.fr) Caractérisation de l'effet inhibiteur des glycomime dans l'adhésion bactérienne de P. aeruginosa par imagerie et spectroscopie (single-molecule et single-cell force spectroscopy, p.2015 ,
Dr. Fernando Moreno-Herrero (fernando.moreno@cnb.csic.es) Dessin d'une cellule liquide pour l'étude de moteurs moléculaires par pince magnétique à diffèrent températures, 2010. ,
Nanoparticles selectively immobilized onto large arrays of gold micro and nanostructures through surface chemical functionalizations, Journal of Colloid Interface Science, vol.447, pp.152-158, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-01489907
Orthogonal chemical functionalizations of patterned gold on silica surfaces, Beilstein Journal of Nanotechnology, vol.6, pp.2272-2277, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01489429
Value Determination by Using a Microarray, ChemBioChem, vol.33, issue.16, pp.2329-2336, 2015. ,
DOI : 10.1016/j.msec.2013.01.055
URL : https://hal.archives-ouvertes.fr/hal-01489380
Probing DNA Helicase Kinetics with Temperature-Controlled Magnetic Tweezers, Small, vol.348, issue.188, pp.1273-1284, 2015. ,
DOI : 10.1016/j.jmb.2005.03.018
Inhibition of host-pathogen interactions in cystic fibrosis The role of lectinglycoconjugates interaction, AFM BioMed, vol.12, pp.13-17, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-01489922
Inhibition of host-pathogen interaction in cystic fibrosis: a new therapeutic approach " , 18ème Journèe Scientifique du Groupe Lyonnais des Glyco-Sciences, 2015. ,
The cystic fibrosis pathogen Pseudomonas aeruginosa: an atomic force microscopy study for the bacterium inhibition via multivalent glycocluster " , XVI. Annual Linz Winter Workshop, pp.1-03, 2014. ,
Inhibition of host-pathogen interactions in cystic fibrosis. The role of lectinglycoconjugates interaction, AFMBioMed, vol.12, pp.13-17, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-01489922