E. R. Abraham and E. A. Cornell, Teflon feedthrough for coupling optical fibers into ultrahigh vacuum systems, Applied Optics, vol.37, issue.10, pp.1762-1763, 1998.
DOI : 10.1364/AO.37.001762

G. S. Agarwal, Quantum statistical theory of optical-resonance phenomena in fluctuating laser fields, Physical Review A, vol.18, issue.4, pp.1490-1506, 1978.
DOI : 10.1103/PhysRevA.18.1490

T. Aoki, Fabrication of Ultralow-Loss Tapered Optical Fibers and Microtoroidal Resonators, Japanese Journal of Applied Physics, vol.49, issue.11, p.118001, 2010.
DOI : 10.1143/JJAP.49.118001

. Arimondo96 and E. Arimondo, Relaxation processes in coherent-population trapping, Physical Review A, vol.54, issue.3, pp.2216-2223, 1996.
DOI : 10.1103/PhysRevA.54.2216

V. I. Balykin, K. Hakuta, F. Le-kien, J. Q. Liang, and M. Morinaga, Atom trapping and guiding with a subwavelength-diameter optical fiber, Physical Review A, vol.70, issue.1, p.11401, 2004.
DOI : 10.1103/PhysRevA.70.011401

J. Béguin, E. M. Bookjans, S. L. Christensen, H. L. Sørensen, J. H. Müller et al., Generation and Detection of a Sub-Poissonian Atom Number Distribution in a One-Dimensional Optical Lattice, Physical Review Letters, vol.113, issue.26, p.263603, 2014.
DOI : 10.1103/PhysRevLett.113.263603

T. A. Birks, W. L. Youwei, R. J. Black, S. Lacroix, F. Gonthier et al., The Shape of Fiber Tapers Tapered single-mode fibres and devices, IEE Proceedings, p.16, 1991.

K. Boller, A. Imamo?lu, and S. E. Harris, Observation of electromagnetically induced transparency, Physical Review Letters, vol.66, issue.20, pp.2593-2596, 1991.
DOI : 10.1103/PhysRevLett.66.2593

M. M. Boyd, D. Andrew, S. Ludlow, S. M. Blatt, T. Foreman et al., Sr Lattice Clock with Inaccuracy below 10 ?15, Phys. Rev. Lett, vol.87, issue.98, p.83002, 2007.

G. Brambilla, V. Finazzi, and D. Richardson, Ultra-low-loss optical fiber nanotapers, Optics Express, vol.12, issue.10, pp.2258-2263, 2004.
DOI : 10.1364/OPEX.12.002258

S. Burks, Towards A Quantum Memory For Non-Classical Light With Cold Atomic Ensembles. Theses URL https, 2010.
URL : https://hal.archives-ouvertes.fr/tel-00699270

Y. Candéla, Silica microcavities : Fibre excitation of whispering gallery modes and coupling with Silicon nanocrystals URL https, 2011.

P. R. Carvalho, E. E. Luís, J. W. De-araujo, and . Tabosa, Angular dependence of an electromagnetically induced transparency resonance in a Doppler-broadened atomic vapor, Physical Review A, vol.70, issue.6, p.63818, 2004.
DOI : 10.1103/PhysRevA.70.063818

D. E. Chang, A. S. Sørensen, E. A. Demler, and M. D. Lukin, A single-photon transistor using nanoscale surface plasmons, Nature Physics, vol.12, issue.11, pp.807-812, 0706.
DOI : 10.1038/nphys708

D. E. Chang, A. Jiang, H. Gorshkov, and . Kimble, Cavity QED with atomic mirrors, New Journal of Physics, vol.14, issue.6, p.63003, 2012.
DOI : 10.1088/1367-2630/14/6/063003

D. E. Chang, V. Vuletic, and M. D. Lukin, Quantum nonlinear optics ??? photon by photon, Nature Photonics, vol.111, issue.9, pp.685-694, 2014.
DOI : 10.1038/nphoton.2014.192

Y. Chen, M. Lee, I. Wang, S. Du, Y. Chen et al., Coherent Optical Memory with High Storage Efficiency and Large Fractional Delay, Physical Review Letters, vol.110, issue.8, p.83601, 2013.
DOI : 10.1103/PhysRevLett.110.083601

K. Choi and . Soo, Coherent control of entanglement with atomic ensembles Citation, 2011.

J. Dalibard13-]-dalibard, Des cages de lumière pour les atomes: la physique des pièges et des réseaux optiques Cours 1: Le potentiel dipolaire, 2013.

S. T. Dawkins, R. Mitsch, D. Reitz, E. Vetsch, and A. , Dispersive Optical Interface Based on Nanofiber-Trapped Atoms, Physical Review Letters, vol.107, issue.24, p.243601, 2011.
DOI : 10.1103/PhysRevLett.107.243601

. Deutsch98, I. H. Deutsch, and P. S. Jessen, Quantum-state control in optical lattices, Physical Review A, vol.57, issue.3, pp.1972-1986, 1998.
DOI : 10.1103/PhysRevA.57.1972

D. Ding12-]-ding, A. Goban, K. S. Choi, and H. J. Kimble, Corrections to our results for optical nanofiber traps in Cesium. ArXiv eprints, pp.1212-4941, 2012.

L. Duan01-]-duan, M. D. Lukin, J. I. Cirac, and P. Zoller, Long-distance quantum communication with atomic ensembles and linear optics, Nature, vol.81, issue.6862, pp.413-418, 2001.
DOI : 10.1038/35106500

M. Fleischhauer and M. D. Lukin, Dark-State Polaritons in Electromagnetically Induced Transparency, Physical Review Letters, vol.84, issue.22, pp.5094-5097, 2000.
DOI : 10.1103/PhysRevLett.84.5094

M. Fleischhauer, A. Imamoglu, and J. P. Marangos, Electromagnetically induced transparency: Optics in coherent media, Reviews of Modern Physics, vol.77, issue.2, pp.633-673, 2005.
DOI : 10.1103/RevModPhys.77.633

A. Gallagher and D. E. Pritchard, -Na, Physical Review Letters, vol.63, issue.9, pp.957-960, 1989.
DOI : 10.1103/PhysRevLett.63.957

URL : https://hal.archives-ouvertes.fr/in2p3-00706858

G. Garcia-fernandez, R. , W. Alt, F. Bruse, C. Dan et al., Optical nanofibers and spectroscopy, Applied Physics B, vol.372, issue.3, pp.3-15, 2011.
DOI : 10.1007/s00340-011-4730-x

L. Giner, L. Veissier, B. Sparkes, A. S. Sheremet, A. Nicolas et al., Experimental investigation of the transition between Autler-Townes splitting and electromagnetically-induced-transparency models, Physical Review A, vol.87, issue.1, p.13823, 2013.
DOI : 10.1103/PhysRevA.87.013823

L. Giner, Etude de la Transparence Electromagnétiquement Induite dans un ensemble d'atomes froids et application aux mémoires quantiques. Theses, pp.37-131, 2013.

A. Goban, K. S. Choi, D. J. Alton, D. Ding, C. Lacroûte et al., Demonstration of a State-Insensitive, Compensated Nanofiber Trap, Physical Review Letters, vol.109, issue.3, pp.33603-95, 2012.
DOI : 10.1103/PhysRevLett.109.033603

A. Goban, Strong atom-light interactions along nanostructures: Transition from free-space to nanophotonic interfaces, p.2015

B. Gouraud, D. Maxein, A. Nicolas, O. Morin, and J. Laurat, Demonstration of a Memory for Tightly Guided Light in an Optical Nanofiber, Physical Review Letters, vol.114, issue.18, pp.180503-180550, 2015.
DOI : 10.1103/PhysRevLett.114.180503

R. Grimm, M. Weidemüller, and Y. B. Ovchinnikov, Optical Dipole Traps for Neutral Atoms, Advances In Atomic, Molecular, and Optical Physics, vol.42, issue.08, pp.95-170, 2000.
DOI : 10.1016/S1049-250X(08)60186-X

T. Grunzweig, A. Hilliard, M. Mcgovern, and M. F. Andersen, Near-deterministic preparation of a single atom in an optical microtrap, Nature Physics, vol.42, issue.12, pp.951-954, 2010.
DOI : 10.1080/002071798222109

K. Hammerer, A. S. Sørensen, and E. S. Polzik, Quantum interface between light and atomic ensembles, Reviews of Modern Physics, vol.82, issue.2, pp.1041-1093, 2010.
DOI : 10.1103/RevModPhys.82.1041

S. M. Hendrickson09-]-hendrickson, T. B. Pittman, and J. D. Franson, Nonlinear transmission through a tapered fiber in rubidium vapor, Journal of the Optical Society of America B, vol.26, issue.2, pp.267-271, 2009.
DOI : 10.1364/JOSAB.26.000267

. Hoffman15, J. E. Hoffman, K. Fredrik, G. Fatemi, S. L. Beadie et al., Rayleigh scattering in an optical nanofiber as a probe of higher-order mode propagation, Optica, vol.2, issue.5, pp.416-423, 2015.
DOI : 10.1364/OPTICA.2.000416

S. D. Jenkins, D. N. Matsukevich, T. Chanelière, A. Kuzmich, T. A. Kennedy et al., Theory of dark-state polariton collapses and revivals Motional dephasing of atomic clock spin waves in an optical lattice, URL http://stacks. iop.org, pp.21803-451240050953, 2006.

[. Jones, D. E. , J. D. Franson, and T. B. Pittman, Saturation of atomic transitions using subwavelength diameter tapered optical fibers in rubidium vapor, Journal of the Optical Society of America B, vol.31, issue.8, pp.311997-2001, 2014.
DOI : 10.1364/JOSAB.31.001997

A. Jöckel, A. Faber, T. Kampschulte, M. Korppi, M. T. Rakher et al., Sympathetic cooling of a membrane oscillator in a hybrid mechanical???atomic system, Nature Nanotechnology, vol.90, issue.1, pp.55-59, 2015.
DOI : 10.1038/nnano.2014.278

S. Kato and T. Aoki, Strong Coupling between a Trapped Single Atom and an All-Fiber Cavity, Physical Review Letters, vol.115, issue.9, p.93603, 2015.
DOI : 10.1103/PhysRevLett.115.093603

V. V. Klimov and M. Ducloy, Spontaneous emission rate of an excited atom placed near a nanofiber, Physical Review A, vol.69, issue.1, pp.13812-55, 2004.
DOI : 10.1103/PhysRevA.69.013812

URL : https://hal.archives-ouvertes.fr/hal-00004409

S. J. Kuppens, K. L. Corwin, K. W. Miller, T. E. Chupp, and C. E. Wieman, Loading an optical dipole trap, Physical Review A, vol.62, issue.1, p.13406, 2000.
DOI : 10.1103/PhysRevA.62.013406

C. Lacroûte, . Choi, D. J. Goban, . Alton, N. Ding et al., A state-insensitive, compensated nanofiber trap, New Journal of Physics, vol.14, issue.2, pp.23056-023056, 2012.
DOI : 10.1088/1367-2630/14/2/023056

L. Kien, F. , V. I. Balykin, and K. Hakuta, Atom trap and waveguide using a two-color evanescent light field around a subwavelength-diameter optical fiber, Physical Review A, vol.70, issue.6, pp.63403-95, 2004.
DOI : 10.1103/PhysRevA.70.063403

L. Kien, F. , S. D. Gupta, V. I. Balykin, and K. Hakuta, Spontaneous emission of a cesium atom near a nanofiber: Efficient coupling of light to guided modes, Physical Review A, vol.72, issue.3, p.32509, 2005.
DOI : 10.1103/PhysRevA.72.032509

L. Kien, F. , and K. Hakuta, Slowing down of a guided light field along a nanofiber in a cold atomic gas, Physical Review A, vol.79, issue.1, p.13818, 2009.
DOI : 10.1103/PhysRevA.79.013818

L. Kien, P. Fam, and A. Schneeweiss, State-dependent potentials in a nanofiber-based two-color trap for cold atoms, Physical Review A, vol.88, issue.3, p.33840, 2013.
DOI : 10.1103/PhysRevA.88.033840

L. Kien, P. Fam, A. Schneeweiss, and . Rauschenbeutel, Dynamical polarizability of atoms in arbitrary light fields: general theory and application to cesium. The European Physical Journal D, pp.97-99

L. Kien and A. Fam, Anisotropy in scattering of light from an atom into the guided modes of a nanofiber, Physical Review A, vol.90, issue.2, pp.23805-55, 2014.
DOI : 10.1103/PhysRevA.90.023805

L. Kien and A. Fam, Propagation of nanofiber-guided light through an array of atoms, Physical Review A, vol.90, issue.6, p.63816, 2014.
DOI : 10.1103/PhysRevA.90.063816

L. Kien and A. Fam, Electromagnetically induced transparency for guided light in an atomic array outside an optical nanofiber, Physical Review A, vol.91, issue.5, p.53847, 2015.
DOI : 10.1103/PhysRevA.91.053847

. Lee15, J. Lee, J. Grover, L. Hoffman, S. Orozco et al., Inhomogeneous broadening of optical transitions of 87

S. G. Leon-saval, T. A. Birks, W. J. Wadsworth, P. J. St, M. W. Russell et al., Supercontinuum generation in submicron fibre waveguides Rapid Production of Uniformly Filled Arrays of Neutral Atoms, Optics Express Phys. Rev. Lett, vol.12, issue.115, p.13073003, 2004.

L. Ding, S. D. , G. Leo, C. Belacel, and I. Favero, Ultralow loss single-mode silica tapers manufactured by a microheater, Applied Optics, vol.49, issue.13, p.13, 2010.
DOI : 10.1364/AO.49.002441

C. Lützler, Fabrication of Optical Microfibers, 2012.

K. Makles15-]-makles, T. Antoni, A. G. Kuhn, S. Deléglise, T. Briant et al., 2D photonic-crystal optomechanical nanoresonator, Optics Letters, vol.40, issue.2, pp.174-177, 2015.
DOI : 10.1364/OL.40.000174

H. Margenau39-]-margenau, Van der waals forces, Reviews of Modern Physics, vol.11, issue.1, pp.1-35, 1939.
DOI : 10.1103/RevModPhys.11.1

D. N. Matsukevich06-]-matsukevich, T. Chanelière, S. D. Jenkins, S. Lan, T. A. Kennedy et al., Observation of Dark State Polariton Collapses and Revivals, Physical Review Letters, vol.96, issue.3, p.33601, 2006.
DOI : 10.1103/PhysRevLett.96.033601

C. Mead and . Alden, Molecular Kramers degeneracy and non-Abelian adiabatic phase factors, Physical Review Letters, vol.59, issue.2, pp.161-164, 1987.
DOI : 10.1103/PhysRevLett.59.161

. Mishina11, O. S. Mishina, M. Scherman, P. Lombardi, J. Ortalo et al., transition with multiple excited levels, Physical Review A, vol.83, issue.5, p.53809, 2011.
DOI : 10.1103/PhysRevA.83.053809

R. Mitsch14a-]-mitsch, C. Sayrin, B. Albrecht, P. Schneeweiss, and A. , Exploiting the local polarization of strongly confined light for sub-micrometer-resolution internal state preparation and manipulation of cold atoms, Physical Review A, vol.89, issue.6, p.63829, 2014.
DOI : 10.1103/PhysRevA.89.063829

R. Mitsch14b-]-mitsch, C. Sayrin, B. Albrecht, P. Schneeweiss, and A. , Quantum state-controlled directional spontaneous emission of photons into a nanophotonic waveguide, Nature Communications, vol.14, 2014.
DOI : 10.1038/ncomms6713

. Morrissey09, M. J. Morrissey, K. Deasy, Y. Wu, S. Chakrabarti et al., Tapered optical fibers as tools for probing magneto-optical trap characteristics, Review of Scientific Instruments, vol.80, issue.5, p.53102, 2009.
DOI : 10.1063/1.3117201

R. Nagai and T. Aoki, Ultra-low-loss tapered optical fibers with minimal lengths, Optics Express, vol.22, issue.23, pp.28427-28436, 2014.
DOI : 10.1364/OE.22.028427

. Nayak09, K. Nayak, and . Prasanna, Optical Nanofibers for Manipulating Atoms and Photons. Theses, University of Electro- Communications, 2009.

A. Nicolas, Optical quantum memories with cold atomic ensembles: a free space implementation for multimode storage, or a nanofiber-based one for high collection efficiency. Theses URL https, pp.73-89, 2014.
URL : https://hal.archives-ouvertes.fr/tel-01127631

I. Novikova, A. V. Gorshkov, D. F. Phillips, A. S. Sørensen, M. D. Lukin et al., Optimal Control of Light Pulse Storage and Retrieval, Physical Review Letters, vol.98, issue.24, p.243602, 2007.
DOI : 10.1103/PhysRevLett.98.243602

. Orucevic07, . Orucevic, V. Fedja, J. Lefèvre-seguin, and . Hare, Transmittance and near-field characterization of sub-wavelength tapered optical fibers, Optics Express, vol.15, issue.21, pp.1513624-13629
DOI : 10.1364/OE.15.013624

. Parigi15, . Parigi, V. D. Valentina, C. Ambrosio, L. Arnold et al., Storage and retrieval of vector beams of light in a multiple-degree-offreedom quantum memory, Nat Commun, vol.6, 2015.

. Patnaik02, A. K. Patnaik, J. Q. Liang, and K. Hakuta, Slow light propagation in a thin optical fiber via electromagnetically induced transparency, Physical Review A, vol.66, issue.6, p.63808, 2002.
DOI : 10.1103/PhysRevA.66.063808

. Peters12, T. Peters, B. Wittrock, F. Blatt, T. Halfmann et al., Thermometry of ultracold atoms by electromagnetically induced transparency, Physical Review A, vol.85, issue.6, p.63416, 2012.
DOI : 10.1103/PhysRevA.85.063416

J. Petersen14-]-petersen, J. Volz, and A. Rauschenbeu-tel, Chiral nanophotonic waveguide interface based on spin-orbit interaction of light, Science, vol.346, issue.6205, pp.67-71, 2014.
DOI : 10.1126/science.1257671

A. Raczy?ski, J. Zaremba, and S. Zieli?ska-kaniasty, Light Propagation in Optically Dressed Media, Open Systems

S. Ravets, J. E. Hoffman, P. R. Kordell, J. D. Wong-campos, S. L. Rolston et al., Intermodal energy transfer in a tapered optical fiber: optimizing transmission, Journal of the Optical Society of America A, vol.30, issue.11
DOI : 10.1364/JOSAA.30.002361

D. Reitz, C. Sayrin, R. Mitsch, P. Schneeweiss, and A. , Coherence Properties of Nanofiber-Trapped Cesium Atoms, Physical Review Letters, vol.110, issue.24, pp.243603-95, 2013.
DOI : 10.1103/PhysRevLett.110.243603

E. B. Rosa and F. W. Grover, Formulas and tables for the calculation of mutual and self-inductance (Revised), Bulletin of the Bureau of Standards, vol.8, issue.1, pp.1-287, 1912.
DOI : 10.6028/bulletin.185

. Sagué07, G. Sagué, E. Vetsch, W. Alt, D. Meschede et al., Cold-Atom Physics Using Ultrathin Optical Fibers: Light-Induced Dipole Forces and Surface Interactions, Physical Review Letters, vol.99, issue.16, pp.163602-163606, 2007.
DOI : 10.1103/PhysRevLett.99.163602

C. Sayrin15-]-sayrin, C. Clausen, B. Albrecht, P. Schneeweiss, and A. , Storage of fiber-guided light in a nanofiber-trapped ensemble of cold atoms, Optica, vol.2, issue.4, pp.353-356, 2015.
DOI : 10.1364/OPTICA.2.000353

N. Schlosser, G. Reymond, I. Protsenko, and P. Grangier, Sub-poissonian loading of single atoms in a microscopic dipole trap, Nature, issue.6841, pp.4111024-1027, 2001.
URL : https://hal.archives-ouvertes.fr/hal-00554215

N. Schlosser, G. Reymond, and P. Grangier, Collisional Blockade in Microscopic Optical Dipole Traps, Physical Review Letters, vol.89, issue.2, p.23005, 2002.
DOI : 10.1103/PhysRevLett.89.023005

URL : https://hal.archives-ouvertes.fr/hal-00554211

. Shan, G. Liye, G. Pauliat, L. Vienne, S. Tong et al., Stimulated Raman scattering in the evanescent field of liquid immersed tapered nanofibers, Applied Physics Letters, vol.102, issue.20
DOI : 10.1063/1.4807170

URL : https://hal.archives-ouvertes.fr/hal-00825652

A. S. Sheremet, L. V. Gerasimov, I. M. Sokolov, D. V. Kupriyanov, O. S. Mishina et al., -scheme approximation, Physical Review A, vol.82, issue.3, p.33838, 2010.
DOI : 10.1103/PhysRevA.82.033838

URL : https://hal.archives-ouvertes.fr/hal-00765730

H. L. Sorensen14-]-sorensen, E. S. Polzik, and J. Appel, Heater Self-Calibration Technique for Shape Prediction of Fiber Tapers, Journal of Lightwave Technology, vol.32, issue.10, pp.1886-1891, 1312.
DOI : 10.1109/JLT.2014.2314319

S. M. Spillane08-]-spillane, G. S. Pati, K. Salit, M. Hall, P. Kumar et al., Observation of Nonlinear Optical Interactions of Ultralow Levels of Light in a Tapered Optical Nanofiber Embedded in a Hot Rubidium Vapor, Physical Review Letters, vol.100, issue.23, p.233602, 2008.
DOI : 10.1103/PhysRevLett.100.233602

. Steck, . Steck, and A. Daniel, Quantum and Atom Optics. available online at http://steck.us/teaching

. Steck98, . Steck, and A. Daniel, Cesium D Line Data. available online at http://steck.us/alkalidata, 1998.

. Stiebeiner10, A. Stiebeiner, R. Garcia-fernandez, and A. Rauschenbeutel, Design and optimization of broadband tapered optical fibers with a nanofiber waist

. Sumetsky06 and M. Sumetsky, How thin can a microfiber be and still guide light?, Optics Letters, vol.31, issue.7, pp.870-872, 2006.
DOI : 10.1364/OL.31.000870

L. Tong, R. R. Gattass, J. B. Ashcom, S. He, J. Lou et al., Subwavelength-diameter silica wires for low-loss optical wave guiding, Nature, vol.426, issue.6968, pp.816-819, 2003.
DOI : 10.1038/nature02193

. Veissier13 and L. Veissier, Quantum memory protocols in large cold atomic ensembles. Theses, Université Pierre et Marie Curie -Paris VI URL https, p.79, 2013.

. Vetsch10, E. Vetsch, D. Reitz, G. Sagué, R. Schmidt et al., Optical Interface Created by Laser-Cooled Atoms Trapped in the Evanescent Field Surrounding an Optical Nanofiber, Physical Review Letters, vol.104, issue.20, pp.203603-95, 2010.
DOI : 10.1103/PhysRevLett.104.203603

. Vetsch12, E. Vetsch, S. T. Dawkins, R. Mitsch, D. Reitz et al., Nanofiber-Based Optical Trapping of Cold Neutral Atoms, IEEE Journal of Selected Topics in Quantum Electronics, vol.18, issue.6, pp.1763-1770, 2012.
DOI : 10.1109/JSTQE.2012.2196025

J. M. Ward, A. Maimaiti, H. Vu, S. N. Le, and . Chormaic, Contributed Review: Optical micro- and nanofiber pulling rig, Review of Scientific Instruments, vol.85, issue.11
DOI : 10.1063/1.4901098

F. Warken, Ultra thin glass fibers as a tool for coupling light and matter, 2007.

W. Connolly and E. , Experiments with Toroidal Microresonators in Cavity QED, p.15, 2009.

L. Yang, W. Jing-hui, S. Bao-sen, and G. Guang-can, Realization of a Two-Dimensional Magneto-optical Trap with a High Optical Depth, Chinese Physics Letters, vol.29, issue.2 2, pp.24205-024205, 2012.

J. Ye, H. J. Kimble, and H. Katori, Quantum State Engineering and Precision Metrology Using State-Insensitive Light Traps, Science, vol.320, issue.5884, pp.1734-1738, 2008.
DOI : 10.1126/science.1148259

G. K. Loy, S. Wong, and . Du, A dark-line twodimensional magneto-optical trap of 85Rb atoms with high optical depth, Review of Scientific Instruments, vol.83, issue.7

B. Zhao, Y. Chen, X. Bao, T. Strassel, C. Chuu et al., A millisecond quantum memory for scalable quantum networks, Nature Physics, vol.42, issue.2, pp.95-99, 2009.
DOI : 10.1038/nature04315