Sigma and RNA Polymerase: An On-Again, Off-Again Relationship?, Molecular Cell, vol.20, issue.3, pp.335-380, 2005. ,
DOI : 10.1016/j.molcel.2005.10.015
Structural basis for ???10 promoter element melting by environmentally induced sigma factors, Nature Structural & Molecular Biology, vol.278, issue.3, 2014. ,
DOI : 10.1016/S0022-2836(02)00948-8
The sigma 70 family: sequence conservation and evolutionary relationships., Journal of Bacteriology, vol.174, issue.12, pp.3843-3852, 1992. ,
DOI : 10.1128/jb.174.12.3843-3849.1992
The extracytoplasmic function (ECF) sigma factors, Adv Microb Physiol, vol.46, pp.47-110, 2002. ,
DOI : 10.1016/S0065-2911(02)46002-X
Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase sigma factors involved in the regulation of extracytoplasmic functions., Proceedings of the National Academy of Sciences, vol.91, issue.16, pp.7573-7580, 1994. ,
DOI : 10.1073/pnas.91.16.7573
Multiple Sigma Subunits and the Partitioning of Bacterial Transcription Space, Annual Review of Microbiology, vol.57, issue.1, pp.441-66, 2003. ,
DOI : 10.1146/annurev.micro.57.030502.090913
Studies of the Escherichia coli Rsd?????70 Complex, Journal of Molecular Biology, vol.335, issue.3, pp.685-92, 2004. ,
DOI : 10.1016/j.jmb.2003.11.004
Crystal Structure of the Escherichia coli Regulator of ??70, Rsd, in Complex with ??70 Domain 4, Journal of Molecular Biology, vol.372, issue.3, pp.649-59, 2007. ,
DOI : 10.1016/j.jmb.2007.06.081
Rsd family proteins make simultaneous interactions with regions 2 and 4 of the primary sigma factor, Molecular Microbiology, vol.105, issue.5, pp.1136-51, 2008. ,
DOI : 10.1111/j.1365-2958.2008.06462.x
Intrinsically unstructured proteins and their 50 Overview of the CCP4 suite and current developments, Acta Crystallogr D Biol Crystallogr, vol.67, pp.235-277, 2005. ,
: combining chain tracing with density modification, Acta Crystallographica Section D Biological Crystallography, vol.46, issue.4, pp.479-85, 2010. ,
DOI : 10.1107/S0907444909038360
Automated Structure Solution With autoSHARP, Methods Mol Biol, vol.364, pp.215-245, 2007. ,
DOI : 10.1385/1-59745-266-1:215
Completion of autobuilt protein models using a database of protein fragments, Acta Crystallographica Section D Biological Crystallography, vol.59, issue.4, pp.328-363, 2012. ,
DOI : 10.1107/S0907444911039655
crystallographic software, Journal of Applied Crystallography, vol.40, issue.4, pp.658-674, 2007. ,
DOI : 10.1107/S0021889807021206
wizard, Acta Crystallographica Section D Biological Crystallography, vol.64, issue.1, pp.61-70, 2008. ,
DOI : 10.1107/S090744490705024X
web server for the generation of multi-group TLS models, Journal of Applied Crystallography, vol.39, issue.1, pp.109-120, 2006. ,
DOI : 10.1107/S0021889805038987
UCSF Chimera?A visualization system for exploratory research and analysis, Journal of Computational Chemistry, vol.373, issue.13, pp.1605-1617, 2004. ,
DOI : 10.1002/jcc.20084
Recent developments in the MAFFT multiple sequence alignment program, Briefings in Bioinformatics, vol.9, issue.4, pp.286-98, 2008. ,
DOI : 10.1093/bib/bbn013
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0, Systematic Biology, vol.59, issue.3, pp.307-328, 2010. ,
DOI : 10.1093/sysbio/syq010
URL : https://hal.archives-ouvertes.fr/lirmm-00511784
MolSurfer: a macromolecular interface navigator, Nucleic Acids Research, vol.31, issue.13, pp.3349-51, 2003. ,
DOI : 10.1093/nar/gkg588
Alcaligenes eutrophus CH34 is a facultative chemolithotroph with plasmid-bound resistance to heavy metals, J. Bacteriol, vol.162, pp.328-334, 1985. ,
Plasmids pMOL28 and pMOL30 of Cupriavidus metallidurans are specialized in the maximal viable response to heavy metals Cupriavidus metallidurans evolution of a metal:resistant bacterieum, J. Bacteriol. Antonie Van Leeuwenhoek, vol.189, issue.96, pp.7417-7425, 2007. ,
The complete genome sequence of Cupriavidus metallidurans strain CH34, a master survivalist in harsh and anthropogenic environments Efflux-mediated heavy metal resistance in prokaryotes, PLoS One FEMS Microbiol. Rev, vol.5, issue.27, pp.313-339, 2003. ,
Regulation of the cnr Cobalt and Nickel Resistance Determinant from Ralstonia sp. Strain CH34, Journal of Bacteriology, vol.182, issue.5, pp.1390-1398, 2000. ,
DOI : 10.1128/JB.182.5.1390-1398.2000
Regulation of the cnr Cobalt and Nickel Resistance Determinant of Ralstonia eutropha (Alcaligenes eutrophus) CH34, Journal of Bacteriology, vol.182, issue.5, pp.1399-1409, 2000. ,
DOI : 10.1128/JB.182.5.1399-1409.2000
Control of Expression of a Periplasmic Nickel Efflux Pump by Periplasmic Nickel Concentrations, BioMetals, vol.37, issue.4, pp.437-448, 2005. ,
DOI : 10.1007/s10534-005-3718-6
X-ray structure of the metal-sensor CnrX in both the apo- and copper-bound forms, FEBS Letters, vol.25, issue.28, pp.3954-3958, 2008. ,
DOI : 10.1016/j.febslet.2008.10.042
Structural basis for metal sensing by CnrX Spectroscopic characterization of the metalbinding sites in the periplasmic metal-sensor domain of CnrX from Cupriavidus metallidurans CH34, .H., and Covès, J. (2014) Metal sensing and signal transduction by CnrX from Cupriavidus metallidurans CH34: role of the only methionine assessed by a functional, spectroscopic, and theoretical study, pp.766-779, 2011. ,
The Crystal Structure of the Anti-?? Factor CnrY in Complex with the ?? Factor CnrH Shows a New Structural Class of Anti-?? Factors Targeting Extracytoplasmic Function ?? Factors, Journal of Molecular Biology, vol.426, issue.12, pp.2313-2327, 2014. ,
DOI : 10.1016/j.jmb.2014.04.003
URL : https://hal.archives-ouvertes.fr/hal-01119790
TOXCAT: A measure of transmembrane helix association in a biological membrane, Proc. Natl. Acad. Sci. USA 96, pp.863-868, 1999. ,
DOI : 10.1073/pnas.96.3.863
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding, Kabsch, W. (2010) XDS. Acta Cryst. D66, pp.248-254, 1976. ,
DOI : 10.1016/0003-2697(76)90527-3
crystallographic software, Journal of Applied Crystallography, vol.40, issue.4, pp.658-674, 2007. ,
DOI : 10.1107/S0021889807021206
Recent developments in classical density modification, Acta Cryst, vol.66, pp.470-478, 2010. ,
: an Automated Program for Molecular Replacement, Journal of Applied Crystallography, vol.30, issue.6, pp.1022-1025, 1997. ,
DOI : 10.1107/S0021889897006766
Features and development of Coot, Acta Cryst, vol.66, pp.486-501, 2010. ,
Global Phasing Ltd, Linking crystallographic model and data quality Science, pp.1030-1033, 2012. ,
Graphical tools for macromolecular crystallography in PHENIX Acta Cryst, pp.12-21, 2010. ,
VMD: Visual molecular dynamics, Journal of Molecular Graphics, vol.14, issue.1, 1996. ,
DOI : 10.1016/0263-7855(96)00018-5
CHARMM: The Biomolecular Simulation Program Simulation of activation free energies in molecular systems, J. Comp. Chem. J. Chem. Phys, vol.14, issue.105, pp.33-38, 1996. ,
Improved Parameters for the Martini Coarse-Grained Protein Force Field, Journal of Chemical Theory and Computation, vol.9, issue.1, pp.687-697, 2005. ,
DOI : 10.1021/ct300646g
GROMACS 4:?? Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation, Journal of Chemical Theory and Computation, vol.4, issue.3, pp.435-447, 2008. ,
DOI : 10.1021/ct700301q
The MARTINI Force Field:?? Coarse Grained Model for Biomolecular Simulations, The Journal of Physical Chemistry B, vol.111, issue.27, pp.7812-7824, 2007. ,
DOI : 10.1021/jp071097f
The MARTINI Coarse-Grained Force Field: Extension to Proteins, Journal of Chemical Theory and Computation, vol.4, issue.5, pp.819-834, 2008. ,
DOI : 10.1021/ct700324x
Going Backward: A Flexible Geometric Approach to Reverse Transformation from Coarse Grained to Atomistic Models, Journal of Chemical Theory and Computation, vol.10, issue.2, pp.676-690, 2014. ,
DOI : 10.1021/ct400617g
The dimerization interface of the glycoprotein Ib?? transmembrane domain corresponds to polar residues within a leucine zipper motif, Protein Science, vol.51, issue.11, pp.1814-1823, 2011. ,
DOI : 10.1002/pro.713
Comparative Protein Modelling by Satisfaction of Spatial Restraints, Journal of Molecular Biology, vol.234, issue.3, pp.779-815, 1981. ,
DOI : 10.1006/jmbi.1993.1626
Structure of Rat Monoamine Oxidase A and Its Specific Recognitions for Substrates and Inhibitors, Proc. Natl. Acad. Sci. USA Proc. Natl. Acad. Sci. USA, pp.103-114, 2004. ,
DOI : 10.1016/j.jmb.2004.02.032
Choosing membrane mimetics for NMR structural studies of transmembrane proteins, Biochimica et Biophysica Acta (BBA) - Biomembranes, vol.1808, issue.8, pp.1957-1974, 2011. ,
DOI : 10.1016/j.bbamem.2011.03.016
Efficiency of detergents at maintaining membrane protein structures in their biologically relevant forms, Biochimica et Biophysica Acta (BBA) - Biomembranes, vol.1818, issue.5, pp.1351-1358, 2009. ,
DOI : 10.1016/j.bbamem.2012.01.013
Crystal structure of the integral membrane diacylglycerol kinase, Nature, vol.43, issue.7450, pp.521-524, 2013. ,
DOI : 10.1038/nature12179
Mitochondrial uncoupling protein 2 structure determined by NMR molecular fragment searching, Nature, vol.125, issue.7358, pp.109-113, 2011. ,
DOI : 10.1038/nature10257
Structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside Dangerous liaisons between detergents and membrane proteins. The case of mitochondrial uncoupling protein 2, Nature J. Am. Chem. Soc, vol.426, issue.135, pp.39-44, 2003. ,
Influences of Membrane Mimetic Environments on Membrane Protein Structures, Annual Review of Biophysics, vol.42, issue.1, pp.361-392, 2013. ,
DOI : 10.1146/annurev-biophys-083012-130326
Sequence specificity in the dimerization of transmembrane .alpha.-helixes, Biochemistry, vol.31, issue.51, pp.12719-12725, 1992. ,
DOI : 10.1021/bi00166a002
Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with beta-branched residues at neighboring positions Folding of helical membrane proteins: the role of polar, GxxxG-like and proline motifs, J. Mol. Biol. Curr. Opin. Struct. Biol, vol.296, issue.14, pp.921-936, 2000. ,
Protein-Protein Interactions in the Membrane: Sequence, Structural, and Biological Motifs, Structure, vol.16, issue.7, pp.991-1001, 2008. ,
DOI : 10.1016/j.str.2008.05.007
Transmembrane helix???helix interactions are modulated by the sequence context and by lipid bilayer properties, Biochimica et Biophysica Acta (BBA) - Biomembranes, vol.1818, issue.4, pp.963-973, 2012. ,
DOI : 10.1016/j.bbamem.2011.07.035
The Affinity of GXXXG Motifs in Transmembrane Helix-Helix Interactions Is Modulated by Long-range Communication, Journal of Biological Chemistry, vol.279, issue.16, pp.16591-16597, 2004. ,
DOI : 10.1074/jbc.M313936200
Transmembrane Recognition of the Semaphorin Co-Receptors Neuropilin 1 and Plexin A1: Coarse-Grained Simulations, PLoS One 9, e97779. 2. Western Blot Une fois séparées sur gel SDS-PAGE, les protéines sont transférées sur une membrane de, 2014. ,
DOI : 10.1371/journal.pone.0097779.s002
La membrane est ensuite réhydratée par une solution de PBS-Tween (Phosphate de sodium 10 mM, NaCl 140 mM, Tween-20 0 La membrane est ensuite incubée pendant 1 heure en présence d'anticorps primaires anti-CnrXs, La migration s'effectue à 100 V et 350 mA pendant 35 minutes dans le tampon de transfert saturée 30 minutes dans du PBS-Tween-Lait 5%, p.30000 ,
Après lavage dans du PBS-Tween, la membrane est incubée pendant 1 heure en présence d'anticorps secondaires couplés à une peroxydase Après plusieurs lavages au PBS-Tween, les anticorps s'étant couplés aux protéines d'intérêt sont détectés grâce au réactif ECL (Luminata Forte, Millipore) Le signal de chimioluminescence est détecté par exposition d'un film radiographique ,
tampon A) à 100 ?L/min sur une colonne Trap (Michrom Bioresources) Les protéines sont ensuite éluées avec 50% de tampon B (90% d'acétonitrile et 0,0% de TFA) à 300 µL/min sur une colonne HPLC C4. Pour éviter le rééchange, les tampons, les vannes et les colonnes sont conservées à 4°C ,
Sierra Analytics) a été utilisé pour le traitement des données. 3. Identification des peptides de CnrXs?Nter impliqués dans l'interaction L'expérience HDX-MS est similaire à celle effectuée avec les protéines entières à quelques différences près : Après avoir arrété l'échange H/D avec la solution de quenching, les protéines sont digérées sur une colonne de pepsine immobilisée. Le dessalage s'effectue à l'aide d'une colonne Microtrap (Michrom Bioresources) ,
The Escherichia coli sigma E-dependent extracytoplasmic stress response is controlled by the regulated proteolysis of an anti-sigma factor, Genes & Development, vol.13, issue.18, pp.2449-2461, 1999. ,
DOI : 10.1101/gad.13.18.2449
A bacterial sensor of plant cell contact controls the transcriptional induction of Ralstonia solanacearum pathogenicity genes, The EMBO Journal, vol.63, issue.10, 2000. ,
DOI : 10.1093/emboj/19.10.2304
Salmonella typhimurium activates virulence gene transcription within, 1992. ,
Iron regulates transcription of the Escherichia coli ferric citrate transport genes directly and through the transcription initiation proteins, Archives of Microbiology, vol.169, issue.6, 1998. ,
DOI : 10.1007/s002030050600
Thiol-Based Redox Switches and Gene Regulation, Antioxidants & Redox Signaling, vol.14, issue.6, pp.1049-1063, 2011. ,
DOI : 10.1089/ars.2010.3400
The structure and function of heavy metal transport P1B-ATPases, BioMetals, vol.62, issue.3-4, pp.233-248, 2007. ,
DOI : 10.1007/s10534-006-9055-6
Recognition of Antimicrobial Peptides by a Bacterial Sensor Kinase, Cell, vol.122, issue.3, pp.461-472, 2005. ,
DOI : 10.1016/j.cell.2005.05.030
Redox-dependent Changes in RsrA, an Anti-sigma Factor in Streptomyces coelicolor: Zinc Release and Disulfide Bond Formation, Journal of Molecular Biology, vol.335, issue.2, pp.425-435, 2004. ,
DOI : 10.1016/j.jmb.2003.10.065
, is inactivated by phosphorylation-dependent ClpC1P2 proteolysis, Molecular Microbiology, vol.15, issue.3, pp.592-606, 2010. ,
DOI : 10.1111/j.1365-2958.2009.07008.x
Stress and the single cell: Intrapopulation diversity is a mechanism to ensure survival upon exposure to stress, International Journal of Food Microbiology, vol.78, issue.1-2, pp.19-30, 2002. ,
DOI : 10.1016/S0168-1605(02)00239-8
Two-component signal transduction, Curr. Opin, 2010. ,
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding, Analytical Biochemistry, vol.72, issue.1-2, pp.248-254, 1976. ,
DOI : 10.1016/0003-2697(76)90527-3
Surface signaling: novel transcription initiation mechanism starting from the cell surface, Archives of Microbiology, vol.167, issue.6, pp.325-331, 1997. ,
DOI : 10.1007/s002030050451
The role of anti-sigma factors in gene regulation, Molecular Microbiology, vol.4, issue.3, 1995. ,
DOI : 10.1016/0092-8674(93)90520-Z
Regulated Intramembrane Proteolysis, Cell, vol.100, issue.4, pp.391-398, 2000. ,
DOI : 10.1016/S0092-8674(00)80675-3
Structural basis for sigma factor mimicry in the general stress response of Alphaproteobacteria, Proceedings of the National Academy of Sciences, vol.109, issue.21, pp.1405-1414, 2012. ,
DOI : 10.1073/pnas.1117003109
Structure of the bacterial RNA polymerase promoter specificity sigma subunit, Mol. Cell, vol.9, pp.527-539, 2002. ,
Crystal Structure of Escherichia coli ??E with the Cytoplasmic Domain of Its Anti-?? RseA, Molecular Cell, vol.11, issue.4, pp.1067-1078, 2003. ,
DOI : 10.1016/S1097-2765(03)00148-5
A Conserved Structural Module Regulates Transcriptional Responses to Diverse Stress Signals in Bacteria, Molecular Cell, vol.27, issue.5, pp.793-805, 2007. ,
DOI : 10.1016/j.molcel.2007.07.009
Regulation of bacterial RNA polymerase ?? factor activity: a structural perspective, Current Opinion in Microbiology, vol.11, issue.2, pp.121-127, 2008. ,
DOI : 10.1016/j.mib.2008.02.016
New insights into S2P signaling cascades: Regulation, variation, and conservation, Protein Science, vol.106, issue.11, pp.2015-2030, 2010. ,
DOI : 10.1002/pro.496
HTRA proteases: regulated proteolysis in protein quality control, Nature Reviews Molecular Cell Biology, vol.430, issue.3, pp.152-162, 2011. ,
DOI : 10.1038/nrm3065
Inward-facing conformation of the zinc transporter YiiP revealed by cryoelectron microscopy, Proc. Natl. Acad. Sci, pp.2140-2145, 2013. ,
DOI : 10.1073/pnas.1215455110
Crystal structures explain functional properties of two E. coli porins, Nature, vol.358, issue.6389, pp.727-733, 1992. ,
DOI : 10.1038/358727a0
Transmembrane helix-helix interactions involved in ErbB receptor signaling, Cell Adhesion & Migration, vol.36, issue.2, pp.299-312, 2010. ,
DOI : 10.4161/cam.4.2.11191
Transmembrane helix???helix interactions are modulated by the sequence context and by lipid bilayer properties, Biochimica et Biophysica Acta (BBA) - Biomembranes, vol.1818, issue.4, 2012. ,
DOI : 10.1016/j.bbamem.2011.07.035
Assembly of Bacterial Inner Membrane Proteins, Annual Review of Biochemistry, vol.80, issue.1, pp.161-187, 2011. ,
DOI : 10.1146/annurev-biochem-060409-092524
Three-dimensional structure of Escherichia coli RNA polymerase holoenzyme determined by electron crystallography, Nature, vol.340, issue.6236, pp.730-732, 1989. ,
DOI : 10.1038/340730a0
The underling mechanism of bacterial TetR/AcrR family transcriptional repressors, Cellular Signalling, vol.25, issue.7, pp.1608-1613, 2013. ,
DOI : 10.1016/j.cellsig.2013.04.003
The structure of the Helicobacter pylori ferric uptake regulator Fur reveals three functional metal binding sites, Mol. Microbiol, vol.79, pp.1260-1275, 2011. ,
URL : https://hal.archives-ouvertes.fr/hal-00936385
The czc operon of Alcaligenes eutrophus CH34: from resistance mechanism to the removal of heavy metals, 1995. ,
From industrial sites to environmental applications with Cupriavidus metallidurans, Antonie van Leeuwenhoek, vol.7, issue.4, pp.247-258, 2009. ,
DOI : 10.1007/s10482-009-9361-4
Co-ordinate expression of virulence genes by ToxR in Vibrio cholerae, Molecular Microbiology, vol.43, issue.4, 1992. ,
DOI : 10.1038/329348a0
Periplasmic interaction between two membrane regulatory proteins, ToxR and ToxS, results in signal transduction and transcriptional activation, Cell, vol.64, issue.1, pp.29-37, 1991. ,
DOI : 10.1016/0092-8674(91)90206-E
Heavy metals " -a meaningless term?, Pure Appl Chem, vol.74807, p.793, 2002. ,
Role of the Extracytoplasmic Function Protein Family Sigma Factor RpoE in Metal Resistance of Escherichia coli, Journal of Bacteriology, vol.187, issue.7, pp.2297-2307, 2005. ,
DOI : 10.1128/JB.187.7.2297-2307.2005
Secondary Transporters for Nickel and Cobalt Ions: Theme and Variations, BioMetals, vol.101, issue.4, pp.399-405, 2005. ,
DOI : 10.1007/s10534-005-3714-x
Surface Signaling in Ferric Citrate Transport Gene Induction: Interaction of the FecA, FecR, and FecI Regulatory Proteins, Journal of Bacteriology, vol.182, issue.3, 2000. ,
DOI : 10.1128/JB.182.3.637-646.2000
Opening the iron box: transcriptional metalloregulation by the Fur protein, J. Bacteriol, vol.181, pp.6223-6229, 1999. ,
The structural biology of ??-barrel membrane proteins: a summary of recent reports, Current Opinion in Structural Biology, vol.21, issue.4, pp.523-531, 2011. ,
DOI : 10.1016/j.sbi.2011.05.005
Metal Ions and Intrinsically Disordered Proteins and Peptides: From Cu/Zn Amyloid-?? to General Principles, Accounts of Chemical Research, vol.47, issue.8, pp.2252-2259, 2014. ,
DOI : 10.1021/ar400293h
Biosynthesis of the Urease Metallocenter, Journal of Biological Chemistry, vol.288, issue.19, pp.13178-13185, 2013. ,
DOI : 10.1074/jbc.R112.446526
Sunlight-Induced Propagation of the Lysogenic Phage Encoding Cholera Toxin, Infection and Immunity, vol.68, issue.8, pp.4795-4801, 2000. ,
DOI : 10.1128/IAI.68.8.4795-4801.2000
Structural Basis of Gating by the Outer Membrane Transporter FecA, Science, vol.295, issue.5560, pp.1715-1719, 2002. ,
DOI : 10.1126/science.1067313
Signal transduction pathway of TonB-dependent transporters, Proceedings of the National Academy of Sciences, vol.104, issue.2, 2007. ,
DOI : 10.1073/pnas.0609887104
The FUR (ferric uptake regulator) superfamily: Diversity and versatility of key transcriptional regulators, Archives of Biochemistry and Biophysics, vol.546, pp.41-52, 2014. ,
DOI : 10.1016/j.abb.2014.01.029
Modulating substrate choice: the SspB adaptor delivers a regulator of the extracytoplasmic-stress response to the AAA+ protease ClpXP for degradation, Genes & Development, vol.18, issue.18, pp.2292-2301, 2004. ,
DOI : 10.1101/gad.1240104
Maltodextrin-binding proteins from diverse bacteria and archaea are potent solubility enhancers, FEBS Letters, vol.23, issue.1-3, pp.53-57, 2003. ,
DOI : 10.1016/S0014-5793(03)00070-X
Molecular strategies for phosphorylation-mediated regulation of response regulator activity, Current Opinion in Microbiology, vol.13, issue.2, pp.160-167, 2010. ,
DOI : 10.1016/j.mib.2009.12.009
Mg2+ as an Extracellular Signal: Environmental Regulation of Salmonella Virulence, Cell, vol.84, issue.1, pp.165-174, 1996. ,
DOI : 10.1016/S0092-8674(00)81003-X
A role for the PhoP/Q regulon in inhibition of fusion between lysosomes and Salmonella-containing vacuoles in macrophages, Cellular Microbiology, vol.25, issue.11, 2001. ,
DOI : 10.1126/science.287.5458.1655
Classification of metal-resistant bacteria from industrial biotopes as Ralstonia campinensis sp. nov., Ralstonia metallidurans sp. nov. and Ralstonia basilensis Steinle et al. 1998 emend, INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, vol.51, issue.5, pp.1773-1782, 2001. ,
DOI : 10.1099/00207713-51-5-1773
Regulation of the cnr Cobalt and Nickel Resistance Determinant from Ralstonia sp. Strain CH34, Journal of Bacteriology, vol.182, issue.5, 1390. ,
DOI : 10.1128/JB.182.5.1390-1398.2000
Control of Expression of a Periplasmic Nickel Efflux Pump by Periplasmic Nickel Concentrations, BioMetals, vol.37, issue.4, pp.437-448, 2005. ,
DOI : 10.1007/s10534-005-3718-6
The Pleiotropic Two-Component Regulatory System PhoP-PhoQ, Journal of Bacteriology, vol.183, issue.6, 2001. ,
DOI : 10.1128/JB.183.6.1835-1842.2001
Transcriptional organization of the czc heavy-metal homeostasis determinant from Alcaligenes eutrophus, J. Bacteriol, vol.181, pp.2385-2393, 1999. ,
Contribution of Extracytoplasmic Function Sigma Factors to Transition Metal Homeostasis in <i>Cupriavidus metallidurans</i> Strain CH34, Journal of Molecular Microbiology and Biotechnology, vol.12, issue.3-4, 2007. ,
DOI : 10.1159/000099644
Assay of Escherichia coli RNA Polymerase: Sigma???Core Interactions, pp.206-212, 2003. ,
DOI : 10.1016/S0076-6879(03)70018-4
PhoP-PhoQ activates transcription of pmrAB, encoding a two-component regulatory system involved in Salmonella typhimurium antimicrobial peptide resistance., Journal of Bacteriology, vol.178, issue.23, pp.6857-6864, 1996. ,
DOI : 10.1128/jb.178.23.6857-6864.1996
Visualizing the kinetic power stroke that drives proton-coupled zinc(ii) transport. Nature advance online publication, 2014. ,
Iron and metal regulation in bacteria, Current Opinion in Microbiology, vol.4, issue.2, pp.172-177, 2001. ,
DOI : 10.1016/S1369-5274(00)00184-3
The extracytoplasmic stress factor, sigmaE, is required to maintain cell envelope integrity in Escherichia coli, PloS One, vol.3, 1573. ,
Crystal Structures of the Liganded and Unliganded Nickel-binding Protein NikA from Escherichia coli, Journal of Biological Chemistry, vol.278, issue.50, 2003. ,
DOI : 10.1074/jbc.M307941200
Regulated intramembrane proteolysis in the control of extracytoplasmic function sigma factors, Research in Microbiology, vol.160, issue.9, pp.696-703, 2009. ,
DOI : 10.1016/j.resmic.2009.08.019
The extracytoplasmic function (ECF) sigma factors, 2002. ,
STRUCTURE AND FUNCTION OF BACTERIAL SIGMA FACTORS, Annual Review of Biochemistry, vol.57, issue.1, pp.839-872, 1988. ,
DOI : 10.1146/annurev.bi.57.070188.004203
A structural model of anti-anti-?? inhibition by a two-component receiver domain: the PhyR stress response regulator, Molecular Microbiology, vol.106, issue.2, 2010. ,
DOI : 10.1111/j.1365-2958.2010.07323.x
Structural basis of a protein partner switch that regulates the general stress response of ??-proteobacteria, Proceedings of the National Academy of Sciences, vol.109, issue.21, 2012. ,
DOI : 10.1073/pnas.1116887109
STRUCTURAL BIOLOGY: The xyz of ABC Transporters, Science, vol.293, issue.5536, pp.1782-1784, 2001. ,
DOI : 10.1126/science.1065588
Cloning and analysis of sodC, encoding the copper-zinc superoxide dismutase of Escherichia coli., Journal of Bacteriology, vol.178, issue.9, p.2564, 1996. ,
DOI : 10.1128/jb.178.9.2564-2571.1996
Coordinating intracellular nickel???metal-site structure-function relationships and the NikR and RcnR repressors, Natural Product Reports, vol.393, issue.5, p.658, 2010. ,
DOI : 10.1039/b906683g
Structural characterization of the active form of PerR: insights into the metal-induced activation of PerR and Fur proteins for DNA binding, Molecular Microbiology, vol.279, issue.29, pp.20-31, 2009. ,
DOI : 10.1111/j.1365-2958.2009.06753.x
URL : https://hal.archives-ouvertes.fr/hal-00730670
The Complete Genome Sequence of Cupriavidus metallidurans Strain CH34, a Master Survivalist in Harsh and Anthropogenic Environments, PLoS ONE, vol.5, issue.5, 2010. ,
DOI : 10.1371/journal.pone.0010433.s019
A unique signature identifies a family of zinc-dependent metallopeptidases, FEBS Letters, vol.13, issue.2, pp.211-214, 1989. ,
DOI : 10.1016/0014-5793(89)80471-5
New genes involved in chromate resistance in Ralstonia metallidurans strain CH34, Archives of Microbiology, vol.181, issue.5, pp.15-25, 2002. ,
DOI : 10.1007/s00203-004-0665-5
RsrA, an anti-sigma factor regulated by redox change, 1999. ,
Transcription induction of the ferric citrate transport genes via the N-terminus of the FecA outer membrane protein, the Ton system and the electrochemical potential of the cytoplasmic membrane, Molecular Microbiology, vol.23, issue.2, pp.333-344, 1997. ,
DOI : 10.1046/j.1365-2958.1997.2401593.x
Structure and function of bacterial outer membrane proteins: barrels in a nutshell, Molecular Microbiology, vol.254, issue.2, pp.239-253, 2000. ,
DOI : 10.1006/jmbi.1997.1224
: chemistry and biochemistry, Biochemical Society Transactions, vol.33, issue.4, p.806, 2005. ,
DOI : 10.1042/BST0330806
Crystal Structure of Escherichia coli CusC, the Outer Membrane Component of a Heavy Metal Efflux Pump, PLoS ONE, vol.60, issue.1, 2011. ,
DOI : 10.1371/journal.pone.0015610.t001
Role of the FliA-FlgM regulatory system on the transcriptional control of the flagellar regulon and flagellar formation in Salmonella typhimurium., Journal of Bacteriology, vol.176, issue.12, pp.3598-3605, 1994. ,
DOI : 10.1128/jb.176.12.3598-3605.1994
Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4, Nature, vol.244, issue.5259, pp.680-685, 1970. ,
DOI : 10.1038/227680a0
Regulated Intramembrane Proteolysis: Signaling Pathways and Biological Functions, Physiology, vol.26, issue.1, pp.34-44, 2011. ,
DOI : 10.1152/physiol.00028.2010
SigmaE is an essential sigma factor in Escherichia coli., Journal of Bacteriology, vol.179, issue.21, pp.6862-6864, 1997. ,
DOI : 10.1128/jb.179.21.6862-6864.1997
The binding mode of Ni-(L-His)2 in NikA revealed by X-ray crystallography, Journal of Inorganic Biochemistry, vol.121, pp.16-18, 2013. ,
DOI : 10.1016/j.jinorgbio.2012.12.010
Two-component regulatory system involved in transcriptional control of heavy-metal homoeostasis in Alcaligenes eutrophus, Molecular Microbiology, vol.23, issue.3, pp.493-503, 1997. ,
DOI : 10.1046/j.1365-2958.1997.d01-1866.x
Cleavage of RseA by RseP requires a carboxyl-terminal hydrophobic amino acid following DegS cleavage, Proceedings of the National Academy of Sciences, vol.106, issue.35, 2009. ,
DOI : 10.1073/pnas.0903289106
Characterization of the inducible nickel and cobalt resistance determinant cnr from pMOL28 of Alcaligenes eutrophus CH34., Journal of Bacteriology, vol.175, issue.3, pp.767-778, 1993. ,
DOI : 10.1128/jb.175.3.767-778.1993
: stress responses, iron transport, and pathogenicity, FEMS Microbiology Reviews, vol.38, issue.4, pp.569-597, 2014. ,
DOI : 10.1111/1574-6976.12078
The sigma 70 family: sequence conservation and evolutionary relationships., Journal of Bacteriology, vol.174, issue.12, pp.3843-3849, 1992. ,
DOI : 10.1128/jb.174.12.3843-3849.1992
Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase sigma factors involved in the regulation of extracytoplasmic functions., Proc. Natl, 1994. ,
DOI : 10.1073/pnas.91.16.7573
Structure and mechanism of the tripartite CusCBA heavy-metal efflux complex, Philosophical Transactions of the Royal Society B: Biological Sciences, vol.19, issue.2, pp.1047-1058, 2012. ,
DOI : 10.1128/CMR.19.2.382-402.2006
Operator sequences of the aerobactin operon of plasmid ColV-K30 binding the ferric uptake regulation (fur) repressor., Journal of Bacteriology, vol.169, issue.6, 1987. ,
DOI : 10.1128/jb.169.6.2624-2630.1987
A two-component system, an anti-sigma factor and two paralogous ECF sigma factors are involved in the control of general stress response in Caulobacter crescentus, Molecular Microbiology, vol.400, issue.6, pp.1598-1612, 2011. ,
DOI : 10.1111/j.1365-2958.2011.07668.x
Structural basis for autoregulation of the zinc transporter YiiP, Nature Structural & Molecular Biology, vol.277, issue.10, pp.1063-1067, 2009. ,
DOI : 10.1107/S0907444996012255
Structure and function of the LysR-type transcriptional regulator (LTTR) family proteins, Microbiology, vol.154, issue.12, pp.3609-3623, 2008. ,
DOI : 10.1099/mic.0.2008/022772-0
Occurrence and regulation of the ferric citrate transport system in Escherichia coli B, Klebsiella pneumoniae, Enterobacter aerogenes, and Photorhabdus luminescens, Archives of Microbiology, vol.332, issue.3, pp.175-186, 2005. ,
DOI : 10.1007/s00203-005-0035-y
Signaling diversity and evolution of extracytoplasmic function (ECF) ?? factors, Current Opinion in Microbiology, vol.16, issue.2, pp.148-155, 2013. ,
DOI : 10.1016/j.mib.2013.02.001
Stimulus Perception in Bacterial Signal-Transducing Histidine Kinases, Microbiology and Molecular Biology Reviews, vol.70, issue.4, pp.910-938, 2006. ,
DOI : 10.1128/MMBR.00020-06
Ironing out the problem: new mechanisms of iron homeostasis, Trends in Biochemical Sciences, vol.30, issue.8, pp.462-468, 2005. ,
DOI : 10.1016/j.tibs.2005.06.005
Dynamic Helix Interactions in Transmembrane Signaling, Cell, vol.127, issue.3, pp.447-450, 2006. ,
DOI : 10.1016/j.cell.2006.10.016
Colorimetric and Fluorimetric Assays to Quantitate Micromolar Concentrations of Transition Metals, Analytical Biochemistry, vol.284, issue.2, pp.307-315, 2000. ,
DOI : 10.1006/abio.2000.4706
The activity of sigma E, an Escherichia coli heat-inducible sigma-factor, is modulated by expression of outer membrane proteins., Genes & Development, vol.7, issue.12b, pp.2618-2628, 1993. ,
DOI : 10.1101/gad.7.12b.2618
Extrachromosomal inheritance controlling resistance to cadmium, cobalt, copper and zinc ions: evidence from curing in a Pseudomonas, Arch. Int. Physiol. Biochim, vol.86, pp.440-442, 1978. ,
, a bacterium specifically adapted to toxic metals: towards a catalogue of metal-responsive genes, FEMS Microbiology Reviews, vol.27, issue.2-3, pp.385-410, 2003. ,
DOI : 10.1016/S0168-6445(03)00045-7
NetPhosBac - A predictor for Ser/Thr phosphorylation sites in bacterial proteins, PROTEOMICS, vol.1784, issue.1, pp.116-125, 2009. ,
DOI : 10.1002/pmic.200800285
A two-component regulatory system (phoP phoQ) controls Salmonella typhimurium virulence., Proceedings of the National Academy of Sciences, vol.86, issue.13, pp.5054-5058, 1989. ,
DOI : 10.1073/pnas.86.13.5054
Cholera toxin transcriptional activator ToxR is a transmembrane DNA binding protein, Cell, vol.48, issue.2, pp.271-279, 1987. ,
DOI : 10.1016/0092-8674(87)90430-2
Bacterial resistances to inorganic mercury salts and organomercurials, Plasmid, vol.27, issue.1, pp.4-16, 1992. ,
DOI : 10.1016/0147-619X(92)90002-R
New components of protein folding in extracytoplasmic compartments of Escherichia coli SurA, FkpA and Skp/OmpH, 1996. ,
Transcriptomic and proteomic analyses of the pMOL30-encoded copper resistance in Cupriavidus metallidurans strain CH34, Microbiol. Read. Engl, vol.152, pp.1765-1776, 2006. ,
Plasmids pMOL28 and pMOL30 of Cupriavidus metallidurans Are Specialized in the Maximal Viable Response to Heavy Metals, Journal of Bacteriology, vol.189, issue.20, pp.7417-7425, 2007. ,
DOI : 10.1128/JB.00375-07
A synergistic approach to protein crystallization: Combination of a fixed-arm carrier with surface entropy reduction, Protein Science, vol.457, issue.4, 2010. ,
DOI : 10.1002/pro.368
Protein-Protein Interactions in the Membrane: Sequence, Structural, and Biological Motifs, Structure, vol.16, issue.7, pp.991-1001, 1993. ,
DOI : 10.1016/j.str.2008.05.007
Nickel uptake and utilization by microorganisms, FEMS Microbiology Reviews, vol.27, issue.2-3, pp.239-261, 2003. ,
DOI : 10.1016/S0168-6445(03)00042-1
Crystallographic Analysis of Thermus aquaticus RNA Polymerase Holoenzyme and a Holoenzyme???Promoter DNA Complex, Methods Enzymol, vol.370, pp.42-53, 2003. ,
DOI : 10.1016/S0076-6879(03)70004-4
The nik operon of Escherichia coli encodes a periplasmic binding-protein-dependent transport system for nickel, Molecular Microbiology, vol.3, issue.6, 1993. ,
DOI : 10.1016/0378-1119(85)90120-9
Toward a systems-level view of dynamic phosphorylation networks, Frontiers in Genetics, vol.72, p.263, 2014. ,
DOI : 10.1021/ac990811p
The cobalt, zinc, and cadmium efflux system CzcABC from Alcaligenes eutrophus functions as a cation-proton antiporter in Escherichia coli., Journal of Bacteriology, vol.177, issue.10, pp.2707-2712, 1995. ,
DOI : 10.1128/jb.177.10.2707-2712.1995
Microbial heavy-metal resistance, Applied Microbiology and Biotechnology, vol.51, issue.6, pp.730-750, 1999. ,
DOI : 10.1007/s002530051457
Heavy metal-resistant bacteria as extremophiles: molecular physiology and biotechnological use of Ralstonia sp. CH34, Extremophiles, vol.4, issue.2, pp.77-82, 2000. ,
DOI : 10.1007/s007920050140
Efflux-mediated heavy metal resistance in prokaryotes, FEMS Microbiology Reviews, vol.27, issue.2-3, 2003. ,
DOI : 10.1016/S0168-6445(03)00048-2
Incidence and function of sigma factors in Ralstonia metallidurans and other bacteria, Archives of Microbiology, vol.181, issue.4, pp.255-268, 2004. ,
DOI : 10.1007/s00203-004-0658-4
Bacterial Transition Metal Homeostasis In Molecular Microbiology of Heavy Metals, pp.117-142, 2007. ,
Paralogs of Genes Encoding Metal Resistance Proteins in <i>Cupriavidus metallidurans</i> Strain CH34, Journal of Molecular Microbiology and Biotechnology, vol.11, issue.1-2, 2006. ,
DOI : 10.1159/000092820
Molecular Basis of Bacterial Outer Membrane Permeability Revisited, Microbiology and Molecular Biology Reviews, vol.67, issue.4, pp.1-32, 1985. ,
DOI : 10.1128/MMBR.67.4.593-656.2003
Regulation of citrate-dependent iron transport of Escherichia coli: FecR is required for transcription activation by Feel, Molecular Microbiology, vol.159, issue.1, pp.119-132, 1995. ,
DOI : 10.1016/0378-1119(87)90365-9
The sigma70 family of sigma factors, Genome Biol, vol.4, 0203. ,
P-Type ATPases, Annual Review of Biophysics, vol.40, issue.1, pp.243-266, 2011. ,
DOI : 10.1146/annurev.biophys.093008.131331
Signal transduction schemes of bacteria, Cell, vol.73, issue.5, pp.857-871, 1993. ,
DOI : 10.1016/0092-8674(93)90267-T
X-ray structure of the metal-sensor CnrX in both the apo- and copper-bound forms, FEBS Letters, vol.25, issue.28, pp.3954-3958, 2008. ,
DOI : 10.1016/j.febslet.2008.10.042
Molecular Dynamics Simulations of the Dimerization of Transmembrane ??-Helices, Accounts of Chemical Research, vol.43, issue.3, pp.388-396, 2010. ,
DOI : 10.1021/ar900211k
Iron Metabolism in Pathogenic Bacteria, Annual Review of Microbiology, vol.54, issue.1, 2000. ,
DOI : 10.1146/annurev.micro.54.1.881
Mechanisms of gold biomineralization in the bacterium Cupriavidus metallidurans, Proceedings of the National Academy of Sciences, vol.106, issue.42, pp.17757-17762, 2009. ,
DOI : 10.1073/pnas.0904583106
Metalloregulatory proteins: Metal selectivity and allosteric switching, Biophysical Chemistry, vol.156, issue.2-3, pp.103-114, 2011. ,
DOI : 10.1016/j.bpc.2011.03.010
Conserved and Variable Functions of the ??E Stress Response in Related Genomes, PLoS Biology, vol.7, issue.1, p.2, 2006. ,
DOI : 10.1371/journal.pbio.0040002.st002
Pushing the envelope: extracytoplasmic stress responses in bacterial pathogens, Nature Reviews Microbiology, vol.1, issue.5, pp.383-394, 2006. ,
DOI : 10.1038/nrmicro1394
Cupriavidus metallidurans: evolution of a metal-resistant bacterium, Antonie van Leeuwenhoek, vol.365, issue.5598, pp.115-139, 2009. ,
DOI : 10.1007/s10482-008-9284-5
TOXCAT: A measure of transmembrane helix association in a biological membrane, Proceedings of the National Academy of Sciences, vol.96, issue.3, pp.863-868, 1999. ,
DOI : 10.1073/pnas.96.3.863
Two novel families of bacterial membrane proteins concerned with nodulation, cell division and transport, Molecular Microbiology, vol.56, issue.5, pp.841-847, 1994. ,
DOI : 10.1016/0022-2836(91)90748-U
Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa, Analytical Biochemistry, vol.166, issue.2, pp.368-379, 1987. ,
DOI : 10.1016/0003-2697(87)90587-2
Combined nickel-cobalt-cadmium resistance encoded by the ncc locus of Alcaligenes xylosoxidans 31A., Journal of Bacteriology, vol.176, issue.22, pp.7045-7054, 1994. ,
DOI : 10.1128/jb.176.22.7045-7054.1994
Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with ??-branched residues at neighboring positions, Journal of Molecular Biology, vol.296, issue.3, pp.921-936, 2000. ,
DOI : 10.1006/jmbi.1999.3488
Folding of helical membrane proteins: the role of polar, GxxxG-like and proline motifs, Current Opinion in Structural Biology, vol.14, issue.4, pp.465-479, 2004. ,
DOI : 10.1016/j.sbi.2004.07.007
ferric uptake regulator (Fur) reveals insights into metal co-ordination, Molecular Microbiology, vol.21, issue.5, pp.1208-1220, 2009. ,
DOI : 10.1111/j.1365-2958.2009.06718.x
The Bacterial Cell Envelope, Cold Spring Harbor Perspectives in Biology, vol.2, issue.5, p.414, 2010. ,
DOI : 10.1101/cshperspect.a000414
BACTERIAL HEAVY METAL RESISTANCE: New Surprises, Annual Review of Microbiology, vol.50, issue.1, 1996. ,
DOI : 10.1146/annurev.micro.50.1.753
Allosteric Activation of DegS, a Stress Sensor PDZ Protease, Cell, vol.131, issue.3, pp.572-583, 2007. ,
DOI : 10.1016/j.cell.2007.08.044
Molecular basis of the magnesium deprivation response in Salmonella typhimurium: identification of PhoP-regulated genes., Journal of Bacteriology, vol.178, issue.17, pp.5092-5099, 1996. ,
DOI : 10.1128/jb.178.17.5092-5099.1996
Disulfide cross-linking indicates that FlgM-bound and free ??28 adopt similar conformations, Proceedings of the National Academy of Sciences, vol.103, issue.45, pp.16722-16727, 2006. ,
DOI : 10.1073/pnas.0606482103
Crystal Structure of the Flagellar ??/Anti-?? Complex ??28/FlgM Reveals an Intact ?? Factor in an Inactive Conformation, Molecular Cell, vol.14, issue.1, pp.127-138, 2004. ,
DOI : 10.1016/S1097-2765(04)00150-9
Mutagenic DNA Polymerase in Human Leukemic Cells, Proceedings of the National Academy of Sciences, vol.70, issue.1, p.245, 1973. ,
DOI : 10.1073/pnas.70.1.245
General stress response in ??-proteobacteria: PhyR and beyond, Molecular Microbiology, vol.13, issue.2, pp.271-277, 2010. ,
DOI : 10.1111/j.1365-2958.2010.07336.x
The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) ?? factor protein family, Molecular Microbiology, vol.61, issue.3, pp.557-581, 2009. ,
DOI : 10.1111/j.1365-2958.2009.06870.x
Two-Component Signal Transduction, Annual Review of Biochemistry, vol.69, issue.1, pp.183-215, 2000. ,
DOI : 10.1146/annurev.biochem.69.1.183
Alcaligenes eutrophus as a model system for bacterial interactions with heavy metals in the environment, Research in Microbiology, vol.148, issue.6, pp.536-551, 1997. ,
DOI : 10.1016/S0923-2508(97)88361-1
A microbial biosensor to predict bioavailable nickel in soil and its transfer to plants, Environmental Pollution, vol.113, issue.1, pp.19-26, 1987. ,
DOI : 10.1016/S0269-7491(00)00177-9
CH34, Biochemistry, vol.50, issue.42, pp.9036-9045, 2011. ,
DOI : 10.1021/bi201031q
URL : https://hal.archives-ouvertes.fr/tel-00656119
Structural Basis for Metal Sensing by CnrX, Journal of Molecular Biology, vol.408, issue.4, pp.766-779, 2011. ,
DOI : 10.1016/j.jmb.2011.03.014
Metal sensing and signal transduction by CnrX from Cupriavidus metallidurans CH34: role of the only methionine assessed by a functional, spectroscopic, and theoretical study, Metallomics, vol.129, issue.2, 2014. ,
DOI : 10.1039/C3MT00248A
URL : https://hal.archives-ouvertes.fr/hal-01119800
From the regulation of peptidoglycan synthesis to bacterial growth and morphology, Nature Reviews Microbiology, vol.185, pp.123-136, 2012. ,
DOI : 10.1038/nrmicro2677
Exploiting the genetic and biochemical capacities of bacteria for the remediation of heavy metal pollution, FEMS Microbiology Reviews, vol.26, issue.4, pp.327-338, 2002. ,
DOI : 10.1111/j.1574-6976.2002.tb00618.x
Taxonomy of the genus Cupriavidus: a tale of lost and found, INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, vol.54, issue.6, pp.2285-2289, 2004. ,
DOI : 10.1099/ijs.0.63247-0
a novel genus accommodating the phylogenetic lineage including Ralstonia eutropha and related species, and proposal of Ralstonia [Pseudomonas] syzygii (Roberts et al. 1990) comb. nov, Int. J. Syst. Evol. Microbiol, vol.54, pp.317-327 ,
The dimerization interface of the glycoprotein Ib?? transmembrane domain corresponds to polar residues within a leucine zipper motif, Protein Science, vol.51, issue.11, pp.1814-1823, 2011. ,
DOI : 10.1002/pro.713
Molecular Dynamic Simulation of the Self-Assembly of DAP12-NKG2C Activating Immunoreceptor Complex, PLoS ONE, vol.104, issue.8, 2014. ,
DOI : 10.1371/journal.pone.0105560.s001
Ferric citrate transport of Escherichia coli: functional regions of the FecR transmembrane regulatory protein, J. Bacteriol, vol.180, pp.2387-2394, 1998. ,
Crystal Structure of the DegS Stress Sensor, Cell, vol.117, issue.4, pp.483-494, 2004. ,
DOI : 10.1016/S0092-8674(04)00454-4
The Chemistry of Evolution: The Development of our Ecosystem, 2005. ,
Transcriptional regulation from the cell surface: conformational changes in the transmembrane protein FecR lead to altered transcription of the ferric citrate transport genes in Escherichia coli., Journal of Bacteriology, vol.177, issue.11, pp.3320-3322, 1995. ,
DOI : 10.1128/jb.177.11.3320-3322.1995