Transposable elements in a marginal plant population: temporal fluctuations provide new insights into genome evolution of wild diploid wheat, Mobile DNA, vol.1, issue.1, p.6, 2010. ,
DOI : 10.1186/1759-8753-1-6
Genome-Wide Association of Histone H3 Lysine Nine Methylation with CHG DNA Methylation in Arabidopsis thaliana, PLoS ONE, vol.3, issue.9, p.3156, 2008. ,
DOI : 10.1371/journal.pone.0003156.s008
Keeping Cell Identity in Arabidopsis Requires PRC1 RING-Finger Homologs that Catalyze H2A Monoubiquitination, Current Biology, vol.20, issue.20, pp.1853-1859, 2010. ,
DOI : 10.1016/j.cub.2010.09.046
RNA-binding E3 ubiquitin ligases: novel players in nucleic acid regulation, Biochemical Society Transactions, vol.38, issue.6, pp.1621-1626, 2010. ,
DOI : 10.1042/BST0381621
Histone H2B Monoubiquitination in the Chromatin of FLOWERING LOCUS C Regulates Flowering Time in Arabidopsis, THE PLANT CELL ONLINE, vol.20, issue.10, pp.2586-2602, 2008. ,
DOI : 10.1105/tpc.108.062760
Discovery and characterization of chromatin states for systematic annotation of the human genome, Nature Biotechnology, vol.449, issue.8, pp.817-825, 2010. ,
DOI : 10.1038/nbt.1662
The Arabidopsis thaliana Homolog of Yeast BRE1 Has a Function in Cell Cycle Regulation during Early Leaf and Root Growth, THE PLANT CELL ONLINE, vol.19, issue.2, pp.417-432, 2007. ,
DOI : 10.1105/tpc.106.041319
Global Mapping of Transposon Location, PLoS Genetics, vol.20, issue.12, p.212, 2006. ,
DOI : 10.1371/journal.pgen.0020212.st003
Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project, Science, vol.330, issue.6012, pp.330-1775, 2010. ,
DOI : 10.1126/science.1196914
Discovery and Annotation of Functional Chromatin Signatures in the Human Genome, PLoS Computational Biology, vol.20, issue.11, p.1000566, 2009. ,
DOI : 10.1371/journal.pcbi.1000566.s018
Chromosomal variation in plant evolution, American Journal of Botany, vol.91, issue.4, pp.621-625, 2004. ,
DOI : 10.3732/ajb.91.4.621
Epigenetic Control of CACTA Transposon Mobility in Arabidopsis thaliana, Genetics, vol.168, issue.2, pp.961-969, 2004. ,
DOI : 10.1534/genetics.104.029637
Comprehensive analysis of the chromatin landscape in Drosophila melanogaster, Nature, vol.97, issue.7339, pp.480-485, 2011. ,
DOI : 10.1038/nature09725
Real-Time DNA Sequencing from Single Polymerase Molecules, Methods in Enzymology, vol.472, pp.431-455, 2010. ,
DOI : 10.1016/S0076-6879(10)72001-2
Role of transposable elements in heterochromatin and epigenetic control, Nature, vol.88, issue.6998, pp.471-477, 2004. ,
DOI : 10.1198/1085711031256
Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis, Cell, vol.133, issue.3, pp.523-559, 2008. ,
DOI : 10.1016/j.cell.2008.03.029
Single-Nucleosome Mapping of Histone Modifications in S. cerevisiae, PLoS Biology, vol.57, issue.10, p.328, 2005. ,
DOI : 10.1371/journal.pbio.0030328.sg007
Broad chromosomal domains of histone modification patterns in C. elegans, Genome Research, vol.21, issue.2, pp.227-263, 2011. ,
DOI : 10.1101/gr.115519.110
ANCORP: a high-resolution approach that generates distinct chromatin state models from multiple genome-wide datasets, The Plant Journal, vol.456, issue.2, pp.339-351, 2010. ,
DOI : 10.1111/j.1365-313X.2010.04236.x
Selective epigenetic control of retrotransposition in Arabidopsis, Nature, vol.408, issue.7262, pp.427-430, 2009. ,
DOI : 10.1038/nature08328
Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis, Nature, vol.15, issue.6834, pp.212-214, 2001. ,
DOI : 10.1038/35075612
Genic and Global Functions for Paf1C in Chromatin Modification and Gene Expression in Arabidopsis, PLoS Genetics, vol.126, issue.8, p.1000077, 2008. ,
DOI : 10.1371/journal.pgen.1000077.s014
Single-molecule sequencing of an individual human genome, Nature Biotechnology, vol.1055, issue.9, pp.847-850, 2009. ,
DOI : 10.1038/nbt.1561
Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin, Genome Research, vol.21, issue.2, pp.147-163, 2011. ,
DOI : 10.1101/gr.110098.110
Integrative epigenomic mapping defines four main chromatin states in Arabidopsis, The EMBO Journal, vol.39, issue.10, pp.1928-1938, 2011. ,
DOI : 10.1038/emboj.2011.103
URL : https://hal.archives-ouvertes.fr/hal-00999846
Identification of functional elements and regulatory circuits by Drosophila modENCODE, Science, issue.6012, pp.330-1787, 2010. ,
A Role for RNAi in the Selective Correction of DNA Methylation Defects, Science, vol.323, issue.5921, pp.1600-1604, 2009. ,
DOI : 10.1126/science.1165313
URL : https://hal.archives-ouvertes.fr/hal-00400271
Arabidopsis TFL2/LHP1 Specifically Associates with Genes Marked by Trimethylation of Histone H3 Lysine 27, PLoS Genetics, vol.95, issue.6, p.86, 2007. ,
DOI : 10.1371/journal.pgen.0030086.st011
Combinatorial patterns of histone acetylations and methylations in the human genome, Nature Genetics, vol.18, issue.7, pp.897-903, 2008. ,
DOI : 10.1073/pnas.0400782101
Plant retrotransposons: Turned on by stress, Current Biology, vol.6, issue.8, pp.959-961, 1996. ,
DOI : 10.1016/S0960-9822(02)00638-3
URL : http://doi.org/10.1016/s0960-9822(02)00638-3
Transposon insertion site profiling chip (TIP-chip), Proceedings of the National Academy of Sciences, vol.103, issue.47, pp.17632-17637, 2006. ,
DOI : 10.1073/pnas.0605450103
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1693798
Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana, Genome Biology, vol.10, issue.6, p.62, 2009. ,
DOI : 10.1186/gb-2009-10-6-r62
Whole-Genome Analysis of Histone H3 Lysine 27 Trimethylation in Arabidopsis, PLoS Biology, vol.37, issue.5, p.129, 2007. ,
DOI : 10.1371/journal.pbio.0050129.st002
Charting histone modifications and the functional organization of mammalian genomes, Nature Reviews Genetics, vol.28, issue.1, pp.7-18, 2011. ,
DOI : 10.1038/nrg2905
Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription, Nature Genetics, vol.10, issue.1, pp.61-69, 2007. ,
DOI : 10.1038/ng1929