Xer site-specific recombination in vitro, EMBO J, vol.14, pp.2112-2120, 1995. ,
The integrase family of site-specific recombinases: regional similarities and global diversity, EMBO J, vol.5, pp.433-440, 1986. ,
Coopérativité et régulation allostérique de la phosphofructokinase d'Escherichia coli, 1993. ,
Allosteric activation increases the maximum velocity of E. coli phosphofructokinase, Journal of Molecular Biology, vol.267, issue.3, pp.476-480, 1997. ,
DOI : 10.1006/jmbi.1997.0883
Cis and trans in site-specific recombination, Molecular Microbiology, vol.20, issue.1, pp.234-237, 1996. ,
DOI : 10.1111/j.1365-2958.1996.tb02505.x
Mobile elements in archaeal genomes, FEMS Microbiology Letters, vol.206, issue.2, pp.131-141, 2002. ,
DOI : 10.1016/S0378-1097(01)00504-3
A newly identified, essential catalytic residue in a critical secondary structure element in the integrase family of site-specific recombinases is conserved in a similar element in eucaryotic type IB topoisomerases, Journal of Molecular Biology, vol.289, issue.3, pp.517-527, 1999. ,
DOI : 10.1006/jmbi.1999.2793
Functional analysis of box I mutations in yeast site-specific recombinases Flp and R: pairwise complementation with recombinase variants lacking the active-site tyrosine., Molecular and Cellular Biology, vol.12, issue.9, pp.3757-3765, 1992. ,
DOI : 10.1128/MCB.12.9.3757
DNA cleavage in trans by the active site tyrosine during Flp recombination: Switching protein partners before exchanging strands, Cell, vol.69, issue.4, pp.647-658, 1992. ,
DOI : 10.1016/0092-8674(92)90228-5
Crystal Structure of a Flp Recombinase???Holliday Junction Complex Assembly of an Active Oligomer by Helix Swapping, Molecular Cell, vol.6, issue.4, pp.885-897, 2000. ,
DOI : 10.1016/S1097-2765(00)00086-1
Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: DNA binding specificity based on energetics of DNA kinking, Journal of Molecular Biology, vol.314, issue.1, pp.63-74, 2001. ,
DOI : 10.1006/jmbi.2001.5089
The Role of the Conserved Trp330 in Flp-mediated Recombination: FUNCTIONAL AND STRUCTURAL ANALYSIS, Journal of Biological Chemistry, vol.278, issue.27, pp.24800-24807, 2003. ,
DOI : 10.1074/jbc.M300853200
crp genes of Shigella flexneri, Salmonella typhimurium, and Escherichia coli., Journal of Bacteriology, vol.167, issue.2, pp.639-646, 1986. ,
DOI : 10.1128/jb.167.2.639-646.1986
URL : https://hal.archives-ouvertes.fr/hal-00112462
Ordered disruption of subunit interfaces during the stepwise reversible dissociation of Escherichia coli phosphofructokinase with potassium thiocyanate, Biochemistry, vol.28, issue.4, pp.1917-1922, 1989. ,
DOI : 10.1021/bi00430a073
Molecular basis of DNA sequence recognition by the catabolite gene activator protein: detailed inferences from three mutations that alter DNA sequence specificity., Proceedings of the National Academy of Sciences, vol.81, issue.23, pp.7274-7278, 1984. ,
DOI : 10.1073/pnas.81.23.7274
Mutations that alter the DNA sequence specificity of the catabolite gene activator protein of E. coli, Nature, vol.10, issue.5983, pp.232-235, 1984. ,
DOI : 10.1038/311232a0
Translational control of transposition activity of the bacterial insertion sequence IS1, EMBO J, vol.10, pp.705-712, 1991. ,
Etude de l'élément transposable bactérien IS1: mise en évidence de la protéine impliquée dans la réaction de transposition, 1992. ,
Is the IS1 transposase, InsAB', the only IS1-encoded protein required for efficient transposition?, Journal of Bacteriology, vol.176, issue.18, pp.5864-5867, 1994. ,
DOI : 10.1128/jb.176.18.5864-5867.1994
The integrase family of tyrosine recombinases: evolution of a conserved active site domain, Nucleic Acids Research, vol.25, issue.18, pp.3605-3614, 1997. ,
DOI : 10.1093/nar/25.18.3605
Structure and control of phosphofructokinase from Bacillus stearothermophilus, Nature, vol.11, issue.5713, pp.500-504, 1979. ,
DOI : 10.1038/247014a0
Crystallographic structure of allosterically inhibited phosphofructokinase at 7 ?? resolution, Journal of Molecular Biology, vol.191, issue.4, pp.713-720, 1986. ,
DOI : 10.1016/0022-2836(86)90455-9
Identification of the active site Tyrosine of FLP recombinase, J. Biol. Chem, vol.265, pp.18504-18510, 1990. ,
Copy number amplification of the 2 ??m circle plasmid of Saccharomyces cerevisiae, Journal of Theoretical Biology, vol.119, issue.2, pp.197-204, 1986. ,
DOI : 10.1016/S0022-5193(86)80074-1
On the molecular mechanisms of transposition., Proceedings of the National Academy of Sciences, vol.78, issue.8, pp.4858-4862, 1981. ,
DOI : 10.1073/pnas.78.8.4858
Structure of the Holliday junction intermediate in Cre???loxP site-specific recombination, The EMBO Journal, vol.17, issue.14, pp.4175-4187, 1998. ,
DOI : 10.1093/emboj/17.14.4175
Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse, Nature, vol.389, issue.6646, pp.40-46, 1997. ,
DOI : 10.1038/37925
Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter., Journal of Bacteriology, vol.177, issue.14, pp.4121-4130, 1995. ,
DOI : 10.1128/jb.177.14.4121-4130.1995
A specific class of IS10 transposase mutants are blocked for target site interactions and promote formation of an excised transposon fragment, Cell, vol.59, issue.2, pp.385-394, 1989. ,
DOI : 10.1016/0092-8674(89)90299-7
Molecular Organization in Site-Specific Recombination: The Catalytic Domain of Bacteriophage HP1 Integrase at 2.7 ?? Resolution, Cell, vol.89, issue.2, pp.227-237, 1997. ,
DOI : 10.1016/S0092-8674(00)80202-0
A new generalizable test for detection of mutations affecting Tn10 transposition, Genetics, vol.116, pp.185-189, 1987. ,
Mutational analysis of the open reading frames in the transposable element IS1, Genetics, vol.120, pp.47-55, 1988. ,
Archaebacterial virus SSV1 encodes a putative DnaA-like protein, Nucleic Acids Research, vol.20, issue.5, 1143. ,
DOI : 10.1093/nar/20.5.1143
Structure of D-63 from Sulfolobus Spindle-Shaped Virus 1: Surface Properties of the Dimeric Four-Helix Bundle Suggest an Adaptor Protein Function, Journal of Virology, vol.78, issue.14, pp.7438-7442, 2004. ,
DOI : 10.1128/JVI.78.14.7438-7442.2004
Crystal Structure of F-93 from Sulfolobus Spindle-Shaped Virus 1, a Winged-Helix DNA Binding Protein, Journal of Virology, vol.78, issue.21, pp.11544-11550, 2004. ,
DOI : 10.1128/JVI.78.21.11544-11550.2004
Use of a Tn5 derivative that creates lacZ translational fusions to obtain a transposition mutant, Gene, vol.63, issue.2, pp.277-285, 1988. ,
DOI : 10.1016/0378-1119(88)90531-8
Flexibility in DNA Recombination: Structure of the Lambda Integrase Catalytic Core, Science, vol.276, issue.5309, pp.126-131, 1997. ,
DOI : 10.1126/science.276.5309.126
Induction of the SOS Response by IS1 Transposase, Journal of Molecular Biology, vol.242, issue.4, pp.339-350, 1994. ,
DOI : 10.1006/jmbi.1994.1585
Dissection of the effector-binding site and complementation studies of Escherichia coli phosphofructokinase using site-directed mutagenesis, Biochemistry, vol.28, issue.17, pp.6841-6847, 1989. ,
DOI : 10.1021/bi00443a010
A proteolyzed derivative of E. coli phosphofructokinase is no longer sensitive to allosteric effectors and still shows cooperativity in substrate binding, Biochemistry, vol.21, issue.26, pp.6656-6660, 1982. ,
DOI : 10.1021/bi00269a007
Fructose 6-phosphate prevents the proteolyzed derivative of Escherichia coli phosphofructokinase from dissociation and inactivation, J. Biol. Chem, vol.260, pp.13450-13453, 1985. ,
Limited proteolysis at the carboxy end modifies interactions between the subunits of Escherichia phosphofructokinase, Biochemistry, vol.25, issue.9, pp.2490-2493, 1986. ,
DOI : 10.1021/bi00357a031
Functional analysis of Box II mutations in yeast site-specific recombinases Flp and R, Journal of Molecular Biology, vol.228, issue.4, pp.1091-1103, 1992. ,
DOI : 10.1016/0022-2836(92)90317-D
Directed protein replacement in recombination full sites reveals trans-horizontal DNA cleavage by Flp recombinase, EMBO J, vol.13, pp.5346-5354, 1994. ,
Wild-type Flp recombinase cleaves DNA in trans, The EMBO Journal, vol.18, issue.3, pp.784-791, 1999. ,
DOI : 10.1093/emboj/18.3.784
Mutational Analysis of the Archaeal Tyrosine Recombinase SSV1 Integrase Suggests a Mechanism of DNA Cleavage in trans, Journal of Biological Chemistry, vol.279, issue.28, pp.28936-28944, 2004. ,
DOI : 10.1074/jbc.M403971200
Regulation of IS1 transposition by the insA gene product, Journal of Molecular Biology, vol.208, issue.4, pp.567-574, 1989. ,
DOI : 10.1016/0022-2836(89)90148-4
Insertion element IS1 encodes two structural genes required for its transposition, Journal of Molecular Biology, vol.177, issue.2, pp.229-245, 1984. ,
DOI : 10.1016/0022-2836(84)90454-6
IS elements as constituents of bacterial genomes, Research in Microbiology, vol.150, issue.9-10, pp.675-687, 1999. ,
DOI : 10.1016/S0923-2508(99)00124-2
SAV1, a temperate U.V.-inducible DNA virus-like particle from the archaebacterium Sulfolobus acidocaldarius isolate B12, EMBO J, vol.3, pp.2165-2168, 1984. ,
Structure of catabolite gene activator protein at 2.9 ??? resolution suggests binding to left-handed B-DNA, Nature, vol.289, issue.5809, pp.744-749, 1981. ,
DOI : 10.1038/290744a0
SSV1-encoded site-specific recombination system in Sulfolobus shibatae, Mol. Gen. Genet, vol.237, pp.334-342, 1993. ,
Positively supercoiled DNA in a virus-like particle of an archaebacterium, Nature, vol.15, issue.6067, pp.256-258, 1986. ,
DOI : 10.1038/321256a0
High-resolution 31P nuclear magnetic resonance studies of metabolism in aerobic Escherichia coli cells., Proceedings of the National Academy of Sciences, vol.74, issue.3, pp.888-891, 1977. ,
DOI : 10.1073/pnas.74.3.888
Purification and properties of D- mannitol-1-phosphate dehydrogenase and D-glucitol-6-phosphate dehydrogenase from Escherichia coli, J. Bacteriol, vol.159, pp.986-990, 1984. ,
Lambda integrase cleaves DNA in cis, EMBO J, vol.13, pp.4421-4430, 1994. ,
Similarities and differences among 105 members of the Int family of site-specific recombinases, Nucleic Acids Research, vol.26, issue.2, pp.391-406, 1998. ,
DOI : 10.1093/nar/26.2.391
Complete nucleotide sequence of the virus SSV1 of the archaebacterium Sulfolobus shibatae, Virology, vol.185, issue.1, pp.242-250, 1991. ,
DOI : 10.1016/0042-6822(91)90771-3
Step-arrest mutants of FLP recombinase: implications for the catalytic mechanism of DNA recombination., Molecular and Cellular Biology, vol.8, issue.8, pp.3303-3310, 1988. ,
DOI : 10.1128/MCB.8.8.3303
Functional analysis of Arg-308 mutants of Flp recombinase. Possible role of Arg-308 in coupling substrate binding to catalysis, J Biol Chem, vol.265, pp.4527-4533, 1990. ,
Viruses of the extremely thermophilic archaeon Sulfolobus, Trends in Microbiology, vol.9, issue.1, pp.39-43, 2001. ,
DOI : 10.1016/S0966-842X(00)01910-7
Evolutionary insights from studies on viruses of hyperthermophilic archaea, Research in Microbiology, vol.154, issue.4, pp.289-294, 2003. ,
DOI : 10.1016/S0923-2508(03)00073-1
Mutations in the 2-microns circle site-specific recombinase that abolish recombination without affecting substrate recognition., Proceedings of the National Academy of Sciences, vol.84, issue.8, pp.2189-2193, 1987. ,
DOI : 10.1073/pnas.84.8.2189
Remarkable morphological diversity of viruses and virus-like particles in hot terrestrial environments, Archives of Virology, vol.147, issue.12, pp.2419-2429, 2002. ,
DOI : 10.1007/s00705-002-0895-2
Crystal Structures of Human Topoisomerase I in Covalent and Noncovalent Complexes with DNA, Science, vol.279, issue.5356, pp.1504-1513, 1998. ,
DOI : 10.1126/science.279.5356.1504
Identification and characterization of the genes encoding three structural proteins of the Sulfolobus virus-like particle SSV1, MGG Molecular & General Genetics, vol.313, issue.1, pp.144-153, 1987. ,
DOI : 10.1007/BF00326550
Gene expression in archaebacteria: Physical mapping of constitutive and UV-inducible transcripts from the Sulfolobus virus-like particle SSV1, MGG Molecular & General Genetics, vol.7, issue.2, pp.270-275, 1987. ,
DOI : 10.1007/BF00329653
indicates that archaebacterial promoters are homologous to eukaryotic pol II promoters, Nucleic Acids Research, vol.16, issue.1, pp.1-19, 1988. ,
DOI : 10.1093/nar/16.1.1
URL : http://doi.org/10.1093/nar/16.1.1
Transfer RNA genes frequently serve as integration sites for prokaryotic genetic elements, Nucleic Acids Research, vol.17, issue.5, pp.1907-1914, 1989. ,
DOI : 10.1093/nar/17.5.1907
URL : http://doi.org/10.1093/nar/17.5.1907
Protective Role for H-NS Protein in IS1 Transposition, Journal of Bacteriology, vol.186, issue.7, pp.2091-2098, 2004. ,
DOI : 10.1128/JB.186.7.2091-2098.2004
Crystal structure of unliganded phosphofructokinase from Escherichia coli, Journal of Molecular Biology, vol.207, issue.4, pp.805-821, 1989. ,
DOI : 10.1016/0022-2836(89)90246-5
The particle SSV1 from the extremely thermophilic archaeon Sulfolobus is a virus: demonstration of infectivity and of transfection with viral DNA., Proceedings of the National Academy of Sciences, vol.89, issue.16, pp.7645-7649, 1992. ,
DOI : 10.1073/pnas.89.16.7645
Phosphoglucose isomerase from Escherischia coli K10: Purification, properties and formation under aerobic and anaerobic condition, Archives of Microbiology, vol.112, issue.3, pp.289-298, 1980. ,
DOI : 10.1007/BF00427206
Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees, Science, vol.29, issue.1, pp.1001-1007, 1991. ,
DOI : 10.1002/bip.360290106
Frameshifting is required for production of the transposase encoded by insertion sequence 1., Proceedings of the National Academy of Sciences, vol.86, issue.12, pp.4609-4613, 1989. ,
DOI : 10.1073/pnas.86.12.4609
Mutagenesis of Arg180 of the crp gene of Escherichia coli K12, p.235, 1987. ,
Régulation de la glycolyse chez Escherichia coli: obtention et étude de mutants de la phosphofructokinase I, 1989. ,
Role of the C-terminal region in the allosteric properties of Escherichia coli phosphofructokinase-1, European Journal of Biochemistry, vol.25, issue.3, pp.487-492, 1990. ,
DOI : 10.1016/0304-4165(75)90232-9
Specific suppression of heterotropic interactions in phosphofructokinase by the mutation of leucine 178 into tryptophan, J. Biol. Chem, vol.265, pp.12146-12148, 1990. ,
Half-site recombinations mediated by yeast site-specific recombinases Flp and R, Journal of Molecular Biology, vol.225, issue.3, pp.621-642, 1992. ,
DOI : 10.1016/0022-2836(92)90390-6
URL : https://hal.archives-ouvertes.fr/hal-00112478
Half-site strand transfer by step-arrest mutants of yeast site-specific recombinase Flp, Journal of Molecular Biology, vol.225, issue.3, pp.643-649, 1992. ,
DOI : 10.1016/0022-2836(92)90391-V
DNA splicing by an active site mutant of Flp recombinase. Possible catalytic cooperativity between the inactive protein and its DNA substrate, J. Biol. Chem, vol.268, pp.455-463, 1993. ,
Mutagenesis of the IS1 transposase: importance of a His-Arg-Tyr triad for activity., Journal of Bacteriology, vol.177, issue.17, pp.5070-5077, 1995. ,
DOI : 10.1128/jb.177.17.5070-5077.1995
Cleavage Properties of an Archaeal Site-specific Recombinase, the SSV1 Integrase, Journal of Biological Chemistry, vol.277, issue.19, pp.16758-16767, 2002. ,
DOI : 10.1074/jbc.M200707200
Trans Complementation of Variant Cre Proteins for Defects in Cleavage and Synapsis, Journal of Biological Chemistry, vol.275, issue.39, pp.30186-30195, 2000. ,
DOI : 10.1074/jbc.M005256200
Crystal structure of the complex of phosphofructokinase from Escherichia coli with its reaction products, Journal of Molecular Biology, vol.204, issue.4, pp.973-994, 1988. ,
DOI : 10.1016/0022-2836(88)90056-3
pH homeostasis in Escherichia coli: measurement by 31P nuclear magnetic resonance of methylphosphonate and phosphate., Proceedings of the National Academy of Sciences, vol.78, issue.10, pp.6271-6275, 1981. ,
DOI : 10.1073/pnas.78.10.6271
Structure/function insights into Tn5 transposition, Current Opinion in Structural Biology, vol.14, issue.1, pp.50-57, 2004. ,
DOI : 10.1016/j.sbi.2004.01.008
Crystal structure of the site-specific recombinase, XerD, The EMBO Journal, vol.16, issue.17, pp.5178-5187, 1997. ,
DOI : 10.1093/emboj/16.17.5178
Introduction by site-directed mutagenesis of a tryptophan residue as a fluorescent probe for the folding of Escherichia coli phosphofructokinase, Biochimie, vol.72, issue.6-7, pp.403-406, 1990. ,
DOI : 10.1016/0300-9084(90)90064-N
Enzymatic properties, renaturation and metabolic role of mannitol-1-phosphate dehydrogenase from Escherichia coli, Biochimie, vol.72, issue.1, pp.33-40, 1990. ,
DOI : 10.1016/0300-9084(90)90170-L
Functional domains of the IS1 transposase: analysis in vivo and in vitro, Molecular Microbiology, vol.4, issue.5, pp.1529-1543, 2004. ,
DOI : 10.1111/j.1365-2958.2004.04223.x
Tyr308 to Phe abolishes cleavage but not recognition: possible homology with the int-family of recombinases, Nucleic Acids Research, vol.21, issue.11, pp.2599-2603, 1993. ,
DOI : 10.1093/nar/21.11.2599
31P nuclear magnetic resonance studies of bioenergetics and glycolysis in anaerobic Escherichia coli cells., Proceedings of the National Academy of Sciences, vol.75, issue.5, pp.2244-2248, 1978. ,
DOI : 10.1073/pnas.75.5.2244
Yeast plasmids resembling 2 micron DNA: regional similarities and diversities at the molecular level., Journal of Bacteriology, vol.169, issue.12, pp.5537-5545, 1987. ,
DOI : 10.1128/jb.169.12.5537-5545.1987
A Structural View of Tyrosine Recombinase Site-Specific Recombination, pp.93-117, 2002. ,
DOI : 10.1128/9781555817954.ch6
Site-specific recombination promotes plasmid amplification in yeast, Cell, vol.46, issue.4, pp.541-550, 1986. ,
DOI : 10.1016/0092-8674(86)90879-2
Comparative Genomic Analysis of Hyperthermophilic Archaeal Fuselloviridae Viruses, Journal of Virology, vol.78, issue.4, pp.1954-1961, 2004. ,
DOI : 10.1128/JVI.78.4.1954-1961.2004
Escherichia coli RNA polymerase binding sites and transcription initiation sites in the transposon Tn3, Gene, vol.24, issue.1, pp.99-113, 1983. ,
DOI : 10.1016/0378-1119(83)90135-X
A plasmid in the archaebacterium Sulfolobus acidocaldarius, EMBO J, vol.9, pp.1035-1038, 1982. ,
Expression of proteins essential for IS1 transposition: specific binding of InsA to the ends of IS1, EMBO J, vol.6, pp.3163-3169, 1987. ,
Functional organization of the ends of IS 1: specific binding site for an IS1-encoded protein, Molecular Microbiology, vol.4, issue.9, pp.1477-1486, 1990. ,
DOI : 10.1016/0022-2836(85)90068-3