Ouvrages de référence : pour la virologie Fields Virology, 3éme édition -Edité par B, 1996. ,
Savoirs Actuels, InterEditions / CNRS Editions, Paris. pour la diffusion aux petits angles Modern Aspects of Small-Angle Scattering, édité par H, Brumberger, 1993. ,
Structure of southern bean mosaic virus at 2.8 ??? resolution, Nature, vol.109, issue.5768, pp.33-39, 1980. ,
DOI : 10.1038/286033a0
Bromovirus RNA replication and transcription, Current Opinion in Genetics & Development, vol.2, issue.1, pp.71-77, 1992. ,
DOI : 10.1016/S0959-437X(05)80325-9
Virion swelling is not required for cotranslational disassembly of cowpea chlorotic mottle virus in vitro, J Virol, vol.71, pp.4296-4305, 1997. ,
Basic local alignment search tool, Journal of Molecular Biology, vol.215, issue.3, pp.403-413, 1990. ,
DOI : 10.1016/S0022-2836(05)80360-2
An X-ray Scattering Study of Bromegrass Mosaic Virus, Biophysical Journal, vol.3, issue.2, pp.175-182, 1963. ,
DOI : 10.1016/S0006-3495(63)86813-7
Interaction between particles suspended in solutions of macromolecules, Journal of Polymer Science, vol.33, issue.126, pp.183-192, 1958. ,
DOI : 10.1002/pol.1958.1203312618
Mechanism of precipitation of proteins by polyethylene glycols Analysis in terms of excluded volume, J Biol Chem, vol.256, pp.12108-12117, 1981. ,
A Model-Based Approach for Determining Orientations of Biological Macromolecules Imaged by Cryoelectron Microscopy, Journal of Structural Biology, vol.116, issue.1, pp.120-150, 1996. ,
DOI : 10.1006/jsbi.1996.0020
The Self-Assembly Of Spherical Plant Viruses, Adv Virus Res, vol.16, pp.99-134, 1970. ,
DOI : 10.1016/S0065-3527(08)60022-6
Properties of cowpea chlorotic mottle virus, its protein and nucleic acid, Virology, vol.34, issue.2, pp.224-39354, 1967. ,
DOI : 10.1016/0042-6822(68)90232-8
Local rule-based theory of virus shell assembly., Proceedings of the National Academy of Sciences, vol.91, issue.16, pp.7732-7738, 1994. ,
DOI : 10.1073/pnas.91.16.7732
Kinetic study of the self-assembly of brome mosaic virus capsid, European Biophysics Journal, vol.15, issue.3, pp.159-168, 1987. ,
DOI : 10.1007/BF00263680
The Molecular Weight and Other Biophysical Properties of Bromegrass Mosaic Virus, Biophysical Journal, vol.2, issue.1, pp.1-9, 1962. ,
DOI : 10.1016/S0006-3495(62)86836-2
Crystallization mechanisms in solution, Journal of Crystal Growth, vol.90, issue.1-3, pp.14-30, 1988. ,
DOI : 10.1016/0022-0248(88)90294-1
Second virial coefficient: variations with lysozyme crystallization conditions, Journal of Crystal Growth, vol.196, issue.2-4, pp.403-414, 1999. ,
DOI : 10.1016/S0022-0248(98)00826-4
Interactions in solution and crystallization of Aspergillus flavus urate oxidase, Journal of Crystal Growth, vol.232, issue.1-4, pp.330-339, 2001. ,
DOI : 10.1016/S0022-0248(01)01054-5
Southern bean mosaic virus-specific proteins are synthesized in an in vitro system supplemented with intact, treated virions, Virology, vol.143, issue.2, pp.392-398, 1985. ,
DOI : 10.1016/0042-6822(85)90379-4
Swelling of bacilliform plant virus nucleocapsids is required for virus-specific protein synthesis in vitro Interactions in solution of large oligomeric protein, Virology. J. Cryst. Growth, vol.148, issue.196, pp.210-217210, 1986. ,
collagenase at pH 7.2, Protein Science, vol.110, issue.10, pp.2123-2131, 1995. ,
DOI : 10.1002/pro.5560041018
Physical principles in the construction of regular viruses Time-resolved scattering investigations of brome mosaic virus microcrystals appearance, Cold spring Harb. Symp. Quant. Biol. 27. Casselyn, Acta Crystallogr D Biol Crystallogr, vol.58, pp.1568-70, 1962. ,
Spherical plant viruses: interactions in solution, phase diagrams and crystallization of brome mosaic virus, Acta Crystallographica Section D Biological Crystallography, vol.57, issue.12, pp.1799-1812, 2001. ,
DOI : 10.1107/S0907444901014949
Structural polymorphism of bromegrass mosaic virus: A neutron small angle scattering investigation, Virology, vol.88, issue.1, pp.138-186, 1978. ,
DOI : 10.1016/0042-6822(78)90117-4
tRNA elements mediate the assembly of an icosahedral RNA virus, Proceedings of the National Academy of Sciences, vol.243, issue.2, pp.655-60, 2002. ,
DOI : 10.1006/bbrc.1997.7753
The relation between the divergence of sequence and structure in proteins Tobacco mosaic virus: a pioneer of cell-to-cell movement, EMBO J. Citovsky, vol.5, pp.823-826, 1986. ,
Comparison of three algorithms for the assignment of secondary structure in proteins: the advantages of a consensus assignment, "Protein Engineering, Design and Selection", vol.6, issue.4, pp.377-82, 1993. ,
DOI : 10.1093/protein/6.4.377
URL : https://hal.archives-ouvertes.fr/hal-00310605
Methods for Reconstructing Density Maps of ???Single??? Particles from Cryoelectron Micrographs to Subnanometer Resolution, Journal of Structural Biology, vol.128, issue.1, pp.106-124, 1999. ,
DOI : 10.1006/jsbi.1999.4168
A T = 1 capsid formed by protein of brome mosaic virus in the presence of trypsin, Virology, vol.110, issue.1, pp.63-72, 1981. ,
DOI : 10.1016/0042-6822(81)90008-8
Self-assembly of brome mosaic virus protein into capsids, Journal of Molecular Biology, vol.164, issue.4, pp.589-603, 1983. ,
DOI : 10.1016/0022-2836(83)90052-9
On the repulsive forces between charged colloid particles and on the theory of slow coagulation and stability of lyophobe sols, Trans. Faraday Soc, vol.36, 1940. ,
Improved signal-tobackground ration in small angle X-ray scattering experiments with synchrtron radiation using an evacuated cell for solutions Crystallization of nucleic acids and proteins -A practical approach. dans Crystallization of nucleic acids and proteins. A practical appraoch, J. Microsc. J. Appl. Cryst, vol.128, issue.30, pp.219-23749, 1992. ,
Protein interactions as seen by solution X-ray scattering prior to crystallogenesis, Journal of Crystal Growth, vol.168, issue.1-4, pp.28-39, 1996. ,
DOI : 10.1016/0022-0248(96)00359-4
Does calcium ion binding control plant virus disassembly? Virology, pp.524-557, 1977. ,
DOI : 10.1016/0042-6822(77)90478-0
Structure of the Reaggregated Protein Shells of Two Spherical Viruses, Nature, vol.220, issue.5169, pp.815-821, 1968. ,
DOI : 10.1038/220815a0
Thèse -Interactions entre protéines en solution: étude par diffusion des Rayons X aux petits angles du lysozyme et des protéines du cristallin; application à la cristallisation La diffusion des rayons X aux petits angles : application à la biologie, pp.8-11, 1999. ,
??-crystallin interaction forces studied by small angle X-ray scattering and numerical simulations, Journal of Crystal Growth, vol.232, issue.1-4, pp.40-49, 2001. ,
DOI : 10.1016/S0022-0248(01)01160-5
Comparison of the Native CCMV Virion within VitroAssembled CCMV Virions by Cryoelectron Microscopy and Image Reconstruction, Virology, vol.244, issue.1, pp.212-220, 1998. ,
DOI : 10.1006/viro.1998.9107
RECONSTITUTION OF ACTIVE TOBACCO MOSAIC VIRUS FROM ITS INACTIVE PROTEIN AND NUCLEIC ACID COMPONENTS, Proc. Natl.Acad. Sci, pp.690-698, 1955. ,
DOI : 10.1073/pnas.41.10.690
processing and visualization of images in 3D electron microscopy and related fields Knowledge-based protein secondary structure assignment Virus crystallography, J Struct Biol. Proteins. Methods Mol Biol, vol.116, issue.56, pp.190-9566, 1995. ,
Three-Dimensional Reconstruction of Icosahedral Particles???The Uncommon Line, Journal of Structural Biology, vol.116, issue.1, pp.48-55, 1996. ,
DOI : 10.1006/jsbi.1996.0009
Predicting protein crystallization from a dilute solution property, Acta Crystallographica Section D Biological Crystallography, vol.50, issue.4, pp.361-365, 1994. ,
DOI : 10.1107/S0907444994001216
The atomic structure of the bluetongue virus core, Nature, vol.395, pp.470-478, 1998. ,
URL : https://hal.archives-ouvertes.fr/hal-00314291
An atomic model of the outer layer of the bluetongue virus core derived from X-ray crystallography and electron cryomicroscopy, Structure, vol.5, issue.7, pp.885-93, 1955. ,
DOI : 10.1016/S0969-2126(97)00243-8
Tomato bushy stunt virus at 2.9 ??? resolution, Nature, vol.185, issue.5686, pp.368-373, 1978. ,
DOI : 10.1016/0022-2836(69)90236-8
Precipitation of plant viruses by polyethylene glycol, Phytopathology, vol.53, p.362, 1963. ,
The assembly in vitro of some small spherical viruses, hybrid viruses, and other nucleoproteins, Virology, vol.34, issue.3, pp.492-508, 1968. ,
DOI : 10.1016/0042-6822(68)90069-X
Zur Lehre von der Wirkung der Salze, Archiv f??r Experimentelle Pathologie und Pharmakologie, vol.24, issue.4-5, pp.247-260, 1888. ,
DOI : 10.1007/BF01918191
Stabilizing effect of divalent metal ions on virions of southern bean mosaic virus, Virology, vol.69, issue.2, pp.587-595, 1976. ,
DOI : 10.1016/0042-6822(76)90487-6
A pH-Induced Structural Change in Bromegrass Mosaic Virus, Biophysical Journal, vol.4, issue.1, pp.11-21, 1964. ,
DOI : 10.1016/S0006-3495(64)86766-7
Intermolecular and surface forces, 2 ème édition, 1992. ,
Structural studies of viruses with X-Rays ans neutrons. Comp virology, pp.129-181, 1980. ,
Comparative neutron small-angle scattering study of small spherical RNA viruses, Nature, vol.276, issue.5601, pp.417-421, 1977. ,
DOI : 10.1038/266417a0
Easily prepared holey films for use in cryo-electron microscopy, Journal of Microscopy, vol.144, issue.3, 1995. ,
DOI : 10.1111/j.1365-2818.1995.tb03649.x
Quasi-equivalent viruses: a paradigm for protein assemblies, Journal of Molecular Biology, vol.269, issue.5, pp.665-75, 1997. ,
DOI : 10.1006/jmbi.1997.1068
Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features, Biopolymers, vol.33, issue.12, pp.2577-2637, 1983. ,
DOI : 10.1002/bip.360221211
The chemical basis of virus structure, dissociation and reassembly, Front Biol, vol.39, pp.1-485, 1975. ,
Molecular structure: Architectural design of spherical viruses, Nature, vol.24, issue.5916, pp.378-387, 1983. ,
DOI : 10.1038/303378a0
Effects of polyethylene glycol on protein interactions, The Journal of Chemical Physics, vol.113, issue.21, pp.9863-9873, 2000. ,
DOI : 10.1063/1.1321042
Comparison of solubilities and molecular interactions of BPTI molecules giving different polymorphs, Journal of Crystal Growth, vol.173, issue.1-2, 1997. ,
DOI : 10.1016/S0022-0248(96)00834-2
The Bromoviruses, Adv Virus Res, vol.19, pp.151-220, 1974. ,
DOI : 10.1016/S0065-3527(08)60660-0
Strong, weak and metastable liquids, Physica A: Statistical Mechanics and its Applications, vol.244, issue.1-4, pp.227-237, 1997. ,
DOI : 10.1016/S0378-4371(97)00302-6
URL : http://dspace.library.uu.nl:8080/handle/1874/22142
Structure of simian virus 40 at 3.8-A resolution Structure of satellite tobacco necrosis virus at 3.0 A resolution, Nature. J Mol Biol, vol.354, issue.159, pp.278-28493, 1982. ,
Renaturation of transfer ribonucleic acids through site binding of magnesium., Proceedings of the National Academy of Sciences, vol.55, issue.4, pp.941-948290, 1966. ,
DOI : 10.1073/pnas.55.4.941
The crystallographic structure of brome mosaic virus, Journal of Molecular Biology, vol.317, issue.1, pp.95-108, 2002. ,
DOI : 10.1006/jmbi.2001.5389
Plasmodesmata: intercellular channels for macromolecular transport in plants, Current Opinion in Cell Biology, vol.7, issue.5, pp.673-680, 1995. ,
DOI : 10.1016/0955-0674(95)80109-X
Statistical-mechanical model of protein precipitation by nonionic polymer, AIChE Journal, vol.36, issue.10, pp.1517-1528, 1990. ,
DOI : 10.1002/aic.690361007
Dispersion Forces, 1976. ,
A model of attractive interactions to account for fluid???fluid phase separation of protein solutions, The Journal of Chemical Physics, vol.105, issue.8, pp.3290-3300, 1996. ,
DOI : 10.1063/1.471843
Mechanisms of growth for protein and virus crystals, Nature Structural Biology, vol.1, issue.11, pp.956-92778, 1995. ,
DOI : 10.1016/0960-8974(93)90015-V
Application of atomic force microscopy to studies of surface processes in virus crystallization and structural biology, Acta Crystallographica Section D Biological Crystallography, vol.58, issue.10, pp.1617-1621, 2002. ,
DOI : 10.1107/S090744490201274X
Plant virus taxa: properties and epidemiological characteristics, J of Plant Virol, vol.79, pp.151-171, 1997. ,
Mechanisms of macromolecular crystal growth Cold Spring Harbor Cell-to-cell movement of plant viruses, Trends Microbiol, vol.1, pp.105-109, 1993. ,
Atomic Force Microscopy in the Study of Macromolecular Crystal Growth, Annual Review of Biophysics and Biomolecular Structure, vol.29, issue.1, pp.361-410, 1998. ,
DOI : 10.1146/annurev.biophys.29.1.361
Stereochemical quality of protein structure coordinates Interactions in under-and supersaturated lysozyme solutions. Static and dynamic light scattering results, Proteins. J. Chem. Phys, vol.12, issue.103, pp.345-36410424, 1992. ,
Visualization of protein-nucleic acid interactions in a virus Refined structure of intact tobacco mosaic virus at 2.9 A resolution by X-ray fiber diffraction Nuclear instruments & methods in physics research. Section A, Accelerators, spectrometers, detectors and associated equipment, J Mol Biol. Nucl. instrum. methods phys. res, vol.208, pp.307-325, 1989. ,
The crystallization of biological macromolecules from precipitates: evidence for Ostwald ripening, Journal of Crystal Growth, vol.168, issue.1-4, pp.50-62281, 1991. ,
DOI : 10.1016/0022-0248(96)00362-4
Molecular Studies on Bromovirus Capsid Protein, Virology, vol.238, issue.2, pp.452-459, 1997. ,
DOI : 10.1006/viro.1997.8849
Nucleation of First-Order Phase Transitions, Accounts of Chemical Research, vol.31, issue.2, pp.91-97, 1998. ,
DOI : 10.1021/ar9702278
Aggregation states of Brome mosaic virus protein, Virology, vol.61, issue.1, pp.160-167, 1974. ,
DOI : 10.1016/0042-6822(74)90251-7
Colloids in suspense, Physics World, vol.9, issue.4, pp.27-32, 1996. ,
DOI : 10.1088/2058-7058/9/4/23
Conformation of Polypeptides and Proteins, Adv Protein Chem, vol.23, pp.283-438, 1968. ,
DOI : 10.1016/S0065-3233(08)60402-7
Virus Particle Explorer (VIPER), a Website for Virus Capsid Structures and Their Computational Analyses, Journal of Virology, vol.75, issue.24, pp.11943-11950, 2001. ,
DOI : 10.1128/JVI.75.24.11943-11947.2001
Relative effectiveness of various ions on the solubility and crystal growth of lysozyme, J Biol Chem. REFERENCES BIBLIOGRAPHIQUES, vol.264, issue.148, pp.745-748, 1989. ,
Structure of the expanded state of tomato bushy stunt virus, Nature, vol.6, issue.5867, pp.563-568, 1982. ,
DOI : 10.1038/297563a0
Comparative Protein Modelling by Satisfaction of Spatial Restraints, Journal of Molecular Biology, vol.234, issue.3, pp.779-815, 1993. ,
DOI : 10.1006/jmbi.1993.1626
Identification of regions of brome mosaic virus coat protein chemically cross-linked in situ to viral RNA, European Journal of Biochemistry, vol.61, issue.11, pp.69-76, 1986. ,
DOI : 10.1146/annurev.bi.46.070177.002515
Tobacco mosaic virus and the study of early events in virus infections, Lippincott -Raven Publishers, pp.603-614, 1996. ,
DOI : 10.1098/rstb.1999.0412
Structures of the native and swollen forms of cowpea chlorotic mottle virus determined by X-ray crystallography and cryo-electron microscopy, Structure, vol.3, issue.1, pp.63-78, 1995. ,
DOI : 10.1016/S0969-2126(01)00135-6
The structure of simian virus 40 refined at 3.1 ?? resolution, Structure, vol.4, issue.2, pp.165-82, 1996. ,
DOI : 10.1016/S0969-2126(96)00020-2
Capsid fine structure of cowpea chlorotic mottle virus: from a computer analysis of negatively stained virus arrays, Journal of Ultrastructure Research, vol.64, issue.1, pp.63-73, 1978. ,
DOI : 10.1016/S0022-5320(78)90007-2
Protein hydration in solution: Experimental observation by x-ray and neutron scattering, Proceedings of the National Academy of Sciences, vol.46, issue.3, pp.2267-72, 1998. ,
DOI : 10.1016/S0022-2836(76)80071-X
Crystal nucleation in the presence of a metastable critical point, The Journal of Chemical Physics, vol.109, issue.1, pp.223-227, 1998. ,
DOI : 10.1063/1.476554
The Mechanism and Pathway of pH Induced Swelling in Cowpea Chlorotic Mottle Virus, Journal of Molecular Biology, vol.318, issue.3, pp.733-780, 2002. ,
DOI : 10.1016/S0022-2836(02)00135-3
dans Neutron and Synchrotron Radiation for Condensed Matter Studies, p.145, 1994. ,
Understanding salt or PEG induced attractive interactions to crystallize biological macromolecules, Acta Crystallographica Section D Biological Crystallography, vol.58, issue.10, pp.1549-53, 2002. ,
DOI : 10.1107/S0907444902014439
Proteins in solution:from X-ray scattering intensities to interaction potentials, Journal of Crystal Growth, vol.196, issue.2-4, pp.193-2031975, 1997. ,
DOI : 10.1016/S0022-0248(98)00828-8
The three-dimensional distribution of RNA and protein in the interior of tomato bushy stunt virus: a neutron low-resolution single-crystal diffraction study, Structure, vol.2, issue.12, pp.1191-201, 1994. ,
DOI : 10.1016/S0969-2126(94)00121-9
Imaging RNA and dynamic protein segments with low-resolution virus crystallography: experimental design, data processing and implications of electron density maps, Journal of Molecular Biology, vol.284, issue.5, pp.1439-52, 1998. ,
DOI : 10.1006/jmbi.1998.2231
Small-angle X-ray scattering by solutions of biological macromolecules, Structure and Dynamics of Biomolecules. G. G, 2000. ,
Protein Interactions in Solution Characterized by Light and Neutron Scattering: Comparison of Lysozyme and Chymotrypsinogen, Biophysical Journal, vol.75, issue.6, pp.2682-97, 1998. ,
DOI : 10.1016/S0006-3495(98)77713-6
Early interactions between viruses and plants, Semin. Virol, vol.3, pp.423-431, 1992. ,
Theory of the stability of lyophobic colloïds X-ray scattering studies of Aspergillus flavus urate oxidase: towards a better understanding of PEG effects on the crystallization of large proteins, Acta Cryst, vol.58, pp.472-479, 1948. ,
The Structure of Cucumber Mosaic Virus: Cryoelectron Microscopy, X-Ray Crystallography, and Sequence Analysis, Virology, vol.232, issue.1, pp.91-97, 1997. ,
DOI : 10.1006/viro.1997.8543
Nucleocapsid Disassembly and Early Gene Expression by Positive-strand RNA Viruses, Journal of General Virology, vol.66, issue.6, pp.1201-1208, 1985. ,
DOI : 10.1099/0022-1317-66-6-1201
Cotranslational disassembly of tobacco mosaic virus in vitro, Virology, vol.137, issue.2, pp.255-265, 1984. ,
DOI : 10.1016/0042-6822(84)90217-4
Structural dynamics, an intrinsic property of viral capsids, Archives of Virology, vol.146, issue.12, pp.2263-74, 2001. ,
DOI : 10.1007/s007050170001
Quasi-planar nucleus structure in apoferritin crystallization, Nature, vol.406, pp.494-501, 2000. ,
Quasi-planar nucleus structure in apoferritin crystallization, Nature, vol.406, pp.494-501, 2000. ,
Direct Observation of Nucleus Structure and Nucleation Pathways in Apoferritin Crystallization, Journal of the American Chemical Society, vol.123, issue.6, pp.1080-1089, 2001. ,
DOI : 10.1021/ja003039c
Depletion interactions in colloid-polymer mixtures, Physical Review E, vol.54, issue.6, pp.6500-6510, 1996. ,
DOI : 10.1103/PhysRevE.54.6500
Mechanism of capsid assembly for an icosahedral plant virus Scattering Techniques Applied to Supramolecular and Nonequilibrium Systems: Neutron and Light Scattering Studies of Brome Mosaic Virus and its Protein, Virology, vol.277, pp.450-456, 1983. ,